BLASTX nr result
ID: Ophiopogon26_contig00000242
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon26_contig00000242
(659 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ONK55218.1| uncharacterized protein A4U43_UnF6300 [Asparagus ... 105 1e-24
ref|XP_020250262.1| 30S ribosomal protein S1, chloroplastic-like... 105 4e-24
gb|AFK39001.1| unknown [Lotus japonicus] 100 1e-23
gb|AFY06648.1| ribosomal protein S, partial [Carica papaya] 103 7e-23
gb|ACJ83521.1| unknown [Medicago truncatula] 97 1e-22
gb|OVA16711.1| Ribosomal protein S1 [Macleaya cordata] 104 1e-22
ref|XP_015867277.1| PREDICTED: 30S ribosomal protein S1, chlorop... 102 2e-22
ref|XP_021889513.1| 30S ribosomal protein S1, chloroplastic [Car... 103 2e-22
gb|PIN23262.1| hypothetical protein CDL12_04028 [Handroanthus im... 103 2e-22
gb|ESR32541.1| hypothetical protein CICLE_v10005364mg [Citrus cl... 102 2e-22
gb|PKI62667.1| hypothetical protein CRG98_016938 [Punica granatum] 97 3e-22
pdb|5X8R|8 Chain 8, Structure Of The 30s Small Subunit Of Chloro... 102 3e-22
gb|POF12412.1| 30s ribosomal protein s1, chloroplastic [Quercus ... 102 4e-22
ref|XP_021642919.1| 30S ribosomal protein S1, chloroplastic-like... 103 4e-22
ref|XP_020107926.1| 30S ribosomal protein S1, chloroplastic [Ana... 103 4e-22
gb|OAY73076.1| 30S ribosomal protein S1, chloroplastic [Ananas c... 103 4e-22
ref|XP_019440143.1| PREDICTED: 30S ribosomal protein S1, chlorop... 102 5e-22
gb|OMO53435.1| Ribosomal protein S1 [Corchorus capsularis] 102 5e-22
ref|XP_021290314.1| 30S ribosomal protein S1, chloroplastic [Her... 102 5e-22
ref|XP_017975185.1| PREDICTED: 30S ribosomal protein S1, chlorop... 102 5e-22
>gb|ONK55218.1| uncharacterized protein A4U43_UnF6300 [Asparagus officinalis]
Length = 188
Score = 105 bits (261), Expect = 1e-24
Identities = 53/56 (94%), Positives = 54/56 (96%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSL+SEGILGPLT DLP EGLDL
Sbjct: 114 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLSSEGILGPLTSDLPTEGLDL 169
>ref|XP_020250262.1| 30S ribosomal protein S1, chloroplastic-like, partial [Asparagus
officinalis]
Length = 228
Score = 105 bits (261), Expect = 4e-24
Identities = 53/56 (94%), Positives = 54/56 (96%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSL+SEGILGPLT DLP EGLDL
Sbjct: 154 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLSSEGILGPLTSDLPTEGLDL 209
>gb|AFK39001.1| unknown [Lotus japonicus]
Length = 98
Score = 100 bits (248), Expect = 1e-23
Identities = 50/56 (89%), Positives = 54/56 (96%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPL DLPAEGLDL
Sbjct: 35 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSDLPAEGLDL 90
>gb|AFY06648.1| ribosomal protein S, partial [Carica papaya]
Length = 324
Score = 103 bits (258), Expect = 7e-23
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGLSL+S+GILGPLT DLPAEGLDL
Sbjct: 260 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLSLSSDGILGPLTSDLPAEGLDL 315
>gb|ACJ83521.1| unknown [Medicago truncatula]
Length = 75
Score = 96.7 bits (239), Expect = 1e-22
Identities = 48/56 (85%), Positives = 53/56 (94%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPL DLP EGL+L
Sbjct: 10 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLGSDLPPEGLEL 65
>gb|OVA16711.1| Ribosomal protein S1 [Macleaya cordata]
Length = 409
Score = 104 bits (259), Expect = 1e-22
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPLTPDLP EGLDL
Sbjct: 345 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTPDLPVEGLDL 400
>ref|XP_015867277.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Ziziphus
jujuba]
Length = 325
Score = 102 bits (255), Expect = 2e-22
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPLT DLPAEGLDL
Sbjct: 260 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDL 315
>ref|XP_021889513.1| 30S ribosomal protein S1, chloroplastic [Carica papaya]
Length = 412
Score = 103 bits (258), Expect = 2e-22
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGLSL+S+GILGPLT DLPAEGLDL
Sbjct: 348 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLSLSSDGILGPLTSDLPAEGLDL 403
>gb|PIN23262.1| hypothetical protein CDL12_04028 [Handroanthus impetiginosus]
Length = 414
Score = 103 bits (258), Expect = 2e-22
Identities = 52/56 (92%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+SEGILGPLT DLPAEGLDL
Sbjct: 350 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSEGILGPLTSDLPAEGLDL 405
>gb|ESR32541.1| hypothetical protein CICLE_v10005364mg [Citrus clementina]
Length = 339
Score = 102 bits (255), Expect = 2e-22
Identities = 50/56 (89%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L S+GILGPL+PDLPA+GLDL
Sbjct: 276 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLNSDGILGPLSPDLPADGLDL 331
>gb|PKI62667.1| hypothetical protein CRG98_016938 [Punica granatum]
Length = 100
Score = 96.7 bits (239), Expect = 3e-22
Identities = 50/57 (87%), Positives = 55/57 (96%), Gaps = 1/57 (1%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPD-LPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPL+ D LPAEGLDL
Sbjct: 35 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLSSDNLPAEGLDL 91
>pdb|5X8R|8 Chain 8, Structure Of The 30s Small Subunit Of Chloroplast Ribosome
From Spinach
Length = 370
Score = 102 bits (255), Expect = 3e-22
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPLT DLPAEGLDL
Sbjct: 306 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDL 361
>gb|POF12412.1| 30s ribosomal protein s1, chloroplastic [Quercus suber]
Length = 375
Score = 102 bits (255), Expect = 4e-22
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPLT DLPAEGLDL
Sbjct: 306 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDL 361
>ref|XP_021642919.1| 30S ribosomal protein S1, chloroplastic-like [Hevea brasiliensis]
ref|XP_021642920.1| 30S ribosomal protein S1, chloroplastic-like [Hevea brasiliensis]
ref|XP_021642921.1| 30S ribosomal protein S1, chloroplastic-like [Hevea brasiliensis]
ref|XP_021642922.1| 30S ribosomal protein S1, chloroplastic-like [Hevea brasiliensis]
Length = 410
Score = 103 bits (256), Expect = 4e-22
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGLSL+S+GILGPLT D+PAEGLDL
Sbjct: 347 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLSLSSDGILGPLTSDMPAEGLDL 402
>ref|XP_020107926.1| 30S ribosomal protein S1, chloroplastic [Ananas comosus]
gb|OAY81755.1| 30S ribosomal protein S1, chloroplastic [Ananas comosus]
Length = 423
Score = 103 bits (256), Expect = 4e-22
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKADEMAQ FRQRIAQAEAMARADMLRFQPESGL+L+SEGILGPLT DLPAEGLDL
Sbjct: 360 EKADEMAQIFRQRIAQAEAMARADMLRFQPESGLTLSSEGILGPLTSDLPAEGLDL 415
>gb|OAY73076.1| 30S ribosomal protein S1, chloroplastic [Ananas comosus]
Length = 423
Score = 103 bits (256), Expect = 4e-22
Identities = 52/56 (92%), Positives = 54/56 (96%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKADEMAQ FRQRIAQAEAMARADMLRFQPESGL+L+SEGILGPLT DLPAEGLDL
Sbjct: 360 EKADEMAQIFRQRIAQAEAMARADMLRFQPESGLTLSSEGILGPLTSDLPAEGLDL 415
>ref|XP_019440143.1| PREDICTED: 30S ribosomal protein S1, chloroplastic-like [Lupinus
angustifolius]
gb|OIW13762.1| hypothetical protein TanjilG_17941 [Lupinus angustifolius]
Length = 408
Score = 102 bits (255), Expect = 5e-22
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPLT DLPAEGLDL
Sbjct: 343 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDL 398
>gb|OMO53435.1| Ribosomal protein S1 [Corchorus capsularis]
Length = 409
Score = 102 bits (255), Expect = 5e-22
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPLT DLPAEGLDL
Sbjct: 346 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDL 401
>ref|XP_021290314.1| 30S ribosomal protein S1, chloroplastic [Herrania umbratica]
Length = 410
Score = 102 bits (255), Expect = 5e-22
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPLT DLPAEGLDL
Sbjct: 346 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDL 401
>ref|XP_017975185.1| PREDICTED: 30S ribosomal protein S1, chloroplastic [Theobroma
cacao]
Length = 410
Score = 102 bits (255), Expect = 5e-22
Identities = 51/56 (91%), Positives = 55/56 (98%)
Frame = -1
Query: 659 EKADEMAQTFRQRIAQAEAMARADMLRFQPESGLSLTSEGILGPLTPDLPAEGLDL 492
EKA+EMAQTFRQRIAQAEAMARADMLRFQPESGL+L+S+GILGPLT DLPAEGLDL
Sbjct: 346 EKAEEMAQTFRQRIAQAEAMARADMLRFQPESGLTLSSDGILGPLTSDLPAEGLDL 401