BLASTX nr result

ID: Ophiopogon26_contig00000124 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon26_contig00000124
         (546 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020242675.1| carbon catabolite repressor protein 4 homolo...   123   3e-29
gb|ONK59481.1| uncharacterized protein A4U43_C08F6870 [Asparagus...   123   3e-29

>ref|XP_020242675.1| carbon catabolite repressor protein 4 homolog 6, partial [Asparagus
           officinalis]
          Length = 755

 Score =  123 bits (309), Expect = 3e-29
 Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 24/186 (12%)
 Frame = +1

Query: 1   SDNEPCQELKDLLHGEMNISITDSVTSVVPITHEDLTEDDDLKDNMNM-----------A 147
           SD E  QE KDLLHGE+N+S ++ +  VVP+T EDLT+    K+N+N            +
Sbjct: 373 SDKELAQESKDLLHGEINVSNSELLNMVVPMTDEDLTDAAIFKENLNQDLPFKDNQSYTS 432

Query: 148 PSV-------------EDFGTSVSSLDRVSGSTSLNAELPVLENAELSPALATKGKVGID 288
           P+               D   S++  D  SG +   +E  +LEN + SPALAT+ +VG D
Sbjct: 433 PAKTMFSEDLLDRKLHNDSSISMTFFDMASGVSCSISEASLLENIDASPALATEERVGAD 492

Query: 289 ISRQSTHRMNEPNSSTCSSSLTDVDRTMVENLHSDEDYGSTSSVKMLPCAKEISTLDIDD 468
           IS QST RM + NS      L +VD+TM+E+L S  D+G+TSS +M PC++  +TLD+D+
Sbjct: 493 ISCQSTSRMEQLNS------LNEVDKTMMESLDSSGDFGNTSSGEMKPCSENNATLDVDN 546

Query: 469 RKIYID 486
             I ID
Sbjct: 547 HNICID 552


>gb|ONK59481.1| uncharacterized protein A4U43_C08F6870 [Asparagus officinalis]
          Length = 799

 Score =  123 bits (309), Expect = 3e-29
 Identities = 76/186 (40%), Positives = 108/186 (58%), Gaps = 24/186 (12%)
 Frame = +1

Query: 1   SDNEPCQELKDLLHGEMNISITDSVTSVVPITHEDLTEDDDLKDNMNM-----------A 147
           SD E  QE KDLLHGE+N+S ++ +  VVP+T EDLT+    K+N+N            +
Sbjct: 417 SDKELAQESKDLLHGEINVSNSELLNMVVPMTDEDLTDAAIFKENLNQDLPFKDNQSYTS 476

Query: 148 PSV-------------EDFGTSVSSLDRVSGSTSLNAELPVLENAELSPALATKGKVGID 288
           P+               D   S++  D  SG +   +E  +LEN + SPALAT+ +VG D
Sbjct: 477 PAKTMFSEDLLDRKLHNDSSISMTFFDMASGVSCSISEASLLENIDASPALATEERVGAD 536

Query: 289 ISRQSTHRMNEPNSSTCSSSLTDVDRTMVENLHSDEDYGSTSSVKMLPCAKEISTLDIDD 468
           IS QST RM + NS      L +VD+TM+E+L S  D+G+TSS +M PC++  +TLD+D+
Sbjct: 537 ISCQSTSRMEQLNS------LNEVDKTMMESLDSSGDFGNTSSGEMKPCSENNATLDVDN 590

Query: 469 RKIYID 486
             I ID
Sbjct: 591 HNICID 596


Top