BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00055758
         (600 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AVM10482.1| hypothetical chloroplast RF2 (chloroplast) [Crema...    51   2e-06

>gb|AVM10482.1| hypothetical chloroplast RF2 (chloroplast) [Cremastra appendiculata]
 gb|AVM10483.1| hypothetical chloroplast RF2 (chloroplast) [Cremastra appendiculata]
          Length = 2327

 Score = 50.8 bits (120), Expect(2) = 2e-06
 Identities = 22/28 (78%), Positives = 24/28 (85%)
 Frame = -2

Query: 86   RRKNTHSLAVKLCGHEKGIKWNRIGSVV 3
            RRK  HSLAVK+C HEKGIKWNRIG +V
Sbjct: 2287 RRKIPHSLAVKICAHEKGIKWNRIGRMV 2314



 Score = 28.5 bits (62), Expect(2) = 2e-06
 Identities = 11/16 (68%), Positives = 14/16 (87%)
 Frame = -3

Query: 112  KLRGLIHVTGERIPIP 65
            +++ LIHVTGER PIP
Sbjct: 2270 EMKHLIHVTGERFPIP 2285