BLASTX nr result

ID: Ophiopogon25_contig00055742 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00055742
         (565 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020513557.1| extensin-like [Labrus bergylta]                    60   2e-07
ref|XP_022322688.1| extensin-like [Crassostrea virginica]              60   2e-07
ref|XP_024265783.1| extensin-like [Oncorhynchus tshawytscha]           60   5e-07
ref|XP_024234390.1| extensin-like [Oncorhynchus tshawytscha]           56   7e-06

>ref|XP_020513557.1| extensin-like [Labrus bergylta]
          Length = 298

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 64/211 (30%), Positives = 83/211 (39%), Gaps = 25/211 (11%)
 Frame = +3

Query: 3   HSQLSHLPPYFSRPSSTTHLKTTQPRP------HSTAKPNXXXXXXXXXXXXXXQRPRD- 161
           H+  S LP   + PS  T   +  P P      H T  P+              Q     
Sbjct: 24  HTPHSSLPHPLTHPSHLTPHPSPHPSPLTPSPSHLTPSPSPLTPHPPLTPHPSPQPSPSP 83

Query: 162 -HRLTTTHPATSLPSPILTATNQTAQ-----NKLTHRPQPLPSSRQLHHHQD--SKQTTQ 317
            H LT THP TS  +P LT +  T       + LT  P P PS +    H    +   T 
Sbjct: 84  PHPLTLTHPHTSPLTPALTPSPLTPSPPHPPSHLTPHPSPHPSPQPSPPHPSPLTPACTP 143

Query: 318 TQSLCSPSIQ-APLQPRPTHFTLS---LPHADPLT------RLHHRHPRIQPAHIDPLTR 467
             S  +PS Q +PL P P    L+    PH  PLT           HP   P+H+ P   
Sbjct: 144 HPSPLTPSPQPSPLTPHPLTPALTPALTPHTSPLTPSPLTPHPSPPHPSPHPSHLTP--- 200

Query: 468 PKHSLSPSISPLRPK*QPCDAWTRAPRSPAP 560
             H L+P  SPL P  QP    + +P +P+P
Sbjct: 201 --HPLTPHPSPLTPSPQP----SPSPLTPSP 225


>ref|XP_022322688.1| extensin-like [Crassostrea virginica]
          Length = 310

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 42/121 (34%), Positives = 66/121 (54%), Gaps = 7/121 (5%)
 Frame = +2

Query: 38  TAQLH---HPPQDHTAPTP-LDSKTQLHPVSLTRSFSQQPSTPTRPQAHYHSPRYIPPLS 205
           ++QLH   HP + H++P+P LD  T LHP +   S S  P        H+ SP   P ++
Sbjct: 86  SSQLHASTHPQKLHSSPSPPLDHPTHLHPPNNPHS-SHPP--------HFLSPH--PSIT 134

Query: 206 YSHGHQPNRPKQANPSPSASPFLTTAT-PPPGLQANNPNAV--PLLSFDPSPAPTQANPL 376
            +H H P+ P+  +P P+   FL   T PPP L + +P+ +  P+++F P+  PT   P+
Sbjct: 135 PTHLHPPSPPRYLSPPPTTPSFLHHHTPPPPQLTSMHPHLLKPPIITFIPNIIPTLDYPI 194

Query: 377 H 379
           H
Sbjct: 195 H 195


>ref|XP_024265783.1| extensin-like [Oncorhynchus tshawytscha]
          Length = 947

 Score = 59.7 bits (143), Expect = 5e-07
 Identities = 36/119 (30%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
 Frame = +2

Query: 38  TAQLHHPPQDHTAPTPLDSKTQLHPVSLTR------SFSQQPSTPTRPQAHYHSPRYIPP 199
           TA   HP   HT   P  + T   P + TR        S  P  P     H H P++ PP
Sbjct: 286 TAHTQHPRPQHTTTPPPPASTSHRPNTTTRPPPPPPQISLHPIPPNTGPLHMHHPQHSPP 345

Query: 200 LSYSHGHQPNRPKQANPSPSASPFLTTATPPPGLQANNPNAVPLLSFDPSPAPTQANPL 376
            +      P  P+    SP+ +    TATPPP  +   P + P  +  P+P PT  + L
Sbjct: 346 TT-----PPGHPRT---SPTTTQLSPTATPPPATEPPTPRSTPTTTKHPAPPPTSIHTL 396


>ref|XP_024234390.1| extensin-like [Oncorhynchus tshawytscha]
          Length = 652

 Score = 56.2 bits (134), Expect = 7e-06
 Identities = 53/188 (28%), Positives = 72/188 (38%), Gaps = 18/188 (9%)
 Frame = +3

Query: 12  LSHLPPYFSRPSSTTHLKTTQPRPHSTAKPNXXXXXXXXXXXXXXQRPRDHRLTTTHPAT 191
           LSH  P ++ P S TH   + P+P S    +                P+    T  HP  
Sbjct: 284 LSHPHPTYTHPPSPTHATLSHPQPPSPTLIHHHPPSPPSATITPLSHPQPPSPTIPHPQP 343

Query: 192 SLPS---------PIL-------TATNQTAQNK-LTHRPQPLPSSRQLHH-HQDSKQTTQ 317
             P+         PIL       T T+    +  LTH   P  +S  L H H+ S  +T 
Sbjct: 344 PSPTIPHPQPPSPPILHPPPPSPTITHHPPPSATLTHPHPPSATSATLSHTHRPSAPSTP 403

Query: 318 TQSLCSPSIQAPLQPRPTHFTLSLPHADPLTRLHHRHPRIQPAHIDPLTRPKHSLSPSIS 497
           + +L  PS  +P  P P H T  +PH  P +      PR    H DP   P  +LS    
Sbjct: 404 SPTLSPPSATSPTIPHPRHST-PIPHPHPPS-----PPRATLTHPDPPPPPTATLSHPQP 457

Query: 498 PLRPK*QP 521
           P+ P   P
Sbjct: 458 PIPPPSPP 465


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