BLASTX nr result

ID: Ophiopogon25_contig00055515 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00055515
         (350 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020109325.1| uncharacterized protein LOC109724810 [Ananas...    57   5e-07
gb|OVA06746.1| hypothetical protein BVC80_259g6 [Macleaya cordata]     55   1e-06
gb|OVA16572.1| Reverse transcriptase zinc-binding domain [Maclea...    54   4e-06
emb|CAN65940.1| hypothetical protein VITISV_038402 [Vitis vinifera]    55   4e-06
gb|OAY78804.1| putative ribonuclease H protein [Ananas comosus]        54   6e-06

>ref|XP_020109325.1| uncharacterized protein LOC109724810 [Ananas comosus]
          Length = 562

 Score = 57.0 bits (136), Expect = 5e-07
 Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 5/116 (4%)
 Frame = +2

Query: 2   GISYKLGKDNSLSFWHDRWCTKLPLCALFHNYYKLSQDK-----EVVIDHFWRCNR*RLP 166
           G +YKLG  NS+ FW DRWC +  L + F   Y++S  +     EV+ +  W  N     
Sbjct: 356 GSTYKLGNGNSIDFWLDRWCGETTLGSAFPKIYQISNRRYLKVSEVLTEDGWNWNG-IFG 414

Query: 167 VTLDV*LMVKDQKFALSRILSLVSPHQELVDMPSWRWGTAGRFSVRSTYCVLVGDG 334
           +  ++ + ++D    L   LS     Q   D   WRW +   FSV+STY  L   G
Sbjct: 415 IDSEILIGLEDDIAELKDRLSHFYLGQS-PDQIFWRWSSNRLFSVKSTYLALTDGG 469


>gb|OVA06746.1| hypothetical protein BVC80_259g6 [Macleaya cordata]
          Length = 175

 Score = 54.7 bits (130), Expect = 1e-06
 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
 Frame = +2

Query: 2   GISYKLGKDNSLSFWHDRWCTKLPLCALFHNYYKLSQDK-EVVIDHFWRCNR*RLPVTLD 178
           GI  K+G    + FWHD W T+ PL   F + +++S+ K E V D        RL   LD
Sbjct: 8   GILSKVGDGRRIKFWHDNWLTETPLADRFKSLFRVSRKKNESVCDFLTIDEEGRLEWDLD 67

Query: 179 V*LMVKD-QKFALSRILSLVSPH--QELVDMPSWRWGTAGRFSVRSTY 313
           +   + D +    + +  L+S +   E  D  SWRW   G F+VRS Y
Sbjct: 68  LPRRLGDTEATEFTELQMLLSSYVLNEGEDGRSWRWEKNGSFTVRSCY 115


>gb|OVA16572.1| Reverse transcriptase zinc-binding domain [Macleaya cordata]
          Length = 272

 Score = 54.3 bits (129), Expect = 4e-06
 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
 Frame = +2

Query: 2   GISYKLGKDNSLSFWHDRWCTKLPLCALFHNYYKLSQDK-EVVIDHFWRCNR*RLPVTLD 178
           GI  K+G    + FWHD W T+ PL   F + +++S+ K E V D        RL   LD
Sbjct: 8   GILSKVGDGRRIKFWHDNWLTETPLTDRFKSLFRVSRKKNESVCDFLTIDEEGRLEWDLD 67

Query: 179 V*LMVKD-QKFALSRILSLVSPH--QELVDMPSWRWGTAGRFSVRSTY 313
           +   + D +    + +  L+S +   E  D  SWRW   G F+VRS Y
Sbjct: 68  LPRRLGDTEATEFTELQMLLSSYVLNEGEDGRSWRWEKNGSFTVRSCY 115


>emb|CAN65940.1| hypothetical protein VITISV_038402 [Vitis vinifera]
          Length = 2014

 Score = 54.7 bits (130), Expect = 4e-06
 Identities = 36/114 (31%), Positives = 52/114 (45%), Gaps = 3/114 (2%)
 Frame = +2

Query: 5   ISYKLGKDNSLSFWHDRWCTKLPLCALFHNYYKLSQDKEVVIDHFWRCNR*RLPVTLDV* 184
           IS+ +     + FW DRWC++ PLC +F   + LS  KE  +   W              
Sbjct: 530 ISFVVDNGRRVKFWKDRWCSEEPLCEIFPXLFALSNSKEXWVABLWEHRGEGGNWNFRFV 589

Query: 185 LMVKDQKF-ALSRILSLV--SPHQELVDMPSWRWGTAGRFSVRSTYCVLVGDGC 337
             + D +  A+   LSL+  S  +E  D   W+ G  G FSV+  Y VL  +GC
Sbjct: 590 RNLNDWELGAMEHFLSLLQGSVKREXEDRVVWKXGNKGVFSVKGLYSVL-ENGC 642


>gb|OAY78804.1| putative ribonuclease H protein [Ananas comosus]
          Length = 244

 Score = 53.5 bits (127), Expect = 6e-06
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
 Frame = +2

Query: 5   ISYKLGKDNSLSFWHDRWCTKLPLCALFHNYYKLSQDKEVVIDHFWRCNR*RLPVTLDV* 184
           + ++LG   + SFWH RWC +L     F N +  ++ + +    F        P  L + 
Sbjct: 31  VEFQLGNGIATSFWHARWCGELAPRNCFPNLFDAAKHRHLSFCRFGTRANLGFPALLGLL 90

Query: 185 LMVKDQKFALSRILSLVS--PHQELVDM-PSWRWGTAGRFSVRSTYCVLVGDG 334
                ++  L  +++L    P  + +D  PSWRW  +  FSVRS Y  L  DG
Sbjct: 91  -----ERLELQHVITLTCSIPISDNIDYSPSWRWTNSSTFSVRSAYAFLSFDG 138


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