BLASTX nr result

ID: Ophiopogon25_contig00055413 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00055413
         (593 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC18730.1| Tis13_96728 [Rhizophagus irregularis DAOM 181602]      74   4e-13

>dbj|GBC18730.1| Tis13_96728 [Rhizophagus irregularis DAOM 181602]
          Length = 157

 Score = 73.9 bits (180), Expect = 4e-13
 Identities = 56/118 (47%), Positives = 71/118 (60%), Gaps = 4/118 (3%)
 Frame = +3

Query: 3   SSSVIHILSQKYSSYSAA--SLHT*GSL*NDQFVATDKSNSQETKIGKPIIYKYIERDHQ 176
           SSSVIHIL Q+YSSYS A   ++    +    F+AT  +      +G+        +  +
Sbjct: 20  SSSVIHILPQRYSSYSVALEEVYKMVCMNIQTFIATYVTLFYSVDLGQTA------KKQR 73

Query: 177 IRSF-QIFPR*Y*GSGKRIKKTGRAVISRYCFHPEV-QLIVVLRISNSKSGYMILSGR 344
           +R+  +I  R      K+ KKTGRAVI   CFHPEV Q+IVVLRISNSKSGYMILS R
Sbjct: 74  LRNISKIILR----IRKKDKKTGRAVIFICCFHPEVKQIIVVLRISNSKSGYMILSRR 127



 Score = 61.6 bits (148), Expect = 2e-08
 Identities = 28/31 (90%), Positives = 29/31 (93%)
 Frame = +1

Query: 499 RFYVQNDLIDEMGSAPRYSTFLGYQQILFDH 591
           RFYVQ DLIDE GSAPR+STFLGYQQILFDH
Sbjct: 127 RFYVQYDLIDETGSAPRFSTFLGYQQILFDH 157


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