BLASTX nr result

ID: Ophiopogon25_contig00055362 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00055362
         (418 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC38494.1| pseudouridine synthase-like protein [Rhizophagus...   122   1e-29
gb|PKY48497.1| tRNA pseudouridine synthase D [Rhizophagus irregu...   122   1e-29
gb|PKC70501.1| tRNA pseudouridine synthase D [Rhizophagus irregu...   122   1e-29
gb|EXX73054.1| pseudouridine synthase PUS7 [Rhizophagus irregula...   122   1e-29
gb|PKK80576.1| tRNA pseudouridine synthase D [Rhizophagus irregu...   122   1e-29
emb|CEP03890.1| hypothetical protein PBRA_003497 [Plasmodiophora...    68   2e-10
ref|XP_004361680.1| tRNA pseudouridine synthase D [Cavenderia fa...    68   2e-10
ref|XP_023019988.1| pseudouridylate synthase 7 homolog isoform X...    67   3e-10
ref|XP_023019987.1| pseudouridylate synthase 7 homolog isoform X...    67   4e-10
ref|XP_022908215.1| pseudouridylate synthase 7 homolog [Onthopha...    64   6e-09
gb|ORX91940.1| tRNA pseudouridine synthase D [Basidiobolus meris...    63   1e-08
gb|ORX67011.1| tRNA pseudouridine synthase D [Basidiobolus meris...    63   1e-08
ref|XP_014670043.1| PREDICTED: pseudouridylate synthase 7 homolo...    62   1e-08
ref|XP_016605491.1| TruD family tRNA pseudouridine synthase [Spi...    62   2e-08
ref|XP_002127901.1| PREDICTED: pseudouridylate synthase 7 homolo...    62   3e-08
ref|XP_020430772.1| tRNA pseudouridine synthase D [Heterostelium...    62   3e-08
ref|XP_012760214.1| hypothetical protein SAMD00019534_038680, pa...    61   5e-08
ref|XP_003287476.1| hypothetical protein DICPUDRAFT_32540 [Dicty...    60   7e-08
ref|XP_973949.1| PREDICTED: pseudouridylate synthase 7 homolog [...    60   7e-08
ref|XP_011668867.1| PREDICTED: pseudouridylate synthase 7 homolo...    60   7e-08

>dbj|GBC38494.1| pseudouridine synthase-like protein [Rhizophagus irregularis DAOM
           181602]
          Length = 612

 Score =  122 bits (306), Expect = 1e-29
 Identities = 62/75 (82%), Positives = 63/75 (84%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKIMGKP+DLSWKIFKYDDQNI           GKSEPESLPNG NTALRINFSLSASSY
Sbjct: 538 RKIMGKPNDLSWKIFKYDDQNISLSLTDLDLLDGKSEPESLPNGKNTALRINFSLSASSY 597

Query: 183 ATVLLRELMKPTEKE 227
           ATVLLRELMKPTEKE
Sbjct: 598 ATVLLRELMKPTEKE 612


>gb|PKY48497.1| tRNA pseudouridine synthase D [Rhizophagus irregularis]
          Length = 637

 Score =  122 bits (306), Expect = 1e-29
 Identities = 62/75 (82%), Positives = 63/75 (84%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKIMGKP+DLSWKIFKYDDQNI           GKSEPESLPNG NTALRINFSLSASSY
Sbjct: 563 RKIMGKPNDLSWKIFKYDDQNISLSLTDLDLLDGKSEPESLPNGKNTALRINFSLSASSY 622

Query: 183 ATVLLRELMKPTEKE 227
           ATVLLRELMKPTEKE
Sbjct: 623 ATVLLRELMKPTEKE 637


>gb|PKC70501.1| tRNA pseudouridine synthase D [Rhizophagus irregularis]
          Length = 637

 Score =  122 bits (306), Expect = 1e-29
 Identities = 62/75 (82%), Positives = 63/75 (84%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKIMGKP+DLSWKIFKYDDQNI           GKSEPESLPNG NTALRINFSLSASSY
Sbjct: 563 RKIMGKPNDLSWKIFKYDDQNISLSLTDLDLLDGKSEPESLPNGKNTALRINFSLSASSY 622

Query: 183 ATVLLRELMKPTEKE 227
           ATVLLRELMKPTEKE
Sbjct: 623 ATVLLRELMKPTEKE 637


>gb|EXX73054.1| pseudouridine synthase PUS7 [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC38493.1| Pseudouridine synthase-like protein [Rhizophagus irregularis DAOM
           181602]
 gb|PKC14244.1| tRNA pseudouridine synthase D [Rhizophagus irregularis]
 gb|PKY14477.1| tRNA pseudouridine synthase D [Rhizophagus irregularis]
 gb|POG68299.1| pseudouridine synthase [Rhizophagus irregularis DAOM 181602=DAOM
           197198]
          Length = 637

 Score =  122 bits (306), Expect = 1e-29
 Identities = 62/75 (82%), Positives = 63/75 (84%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKIMGKP+DLSWKIFKYDDQNI           GKSEPESLPNG NTALRINFSLSASSY
Sbjct: 563 RKIMGKPNDLSWKIFKYDDQNISLSLTDLDLLDGKSEPESLPNGKNTALRINFSLSASSY 622

Query: 183 ATVLLRELMKPTEKE 227
           ATVLLRELMKPTEKE
Sbjct: 623 ATVLLRELMKPTEKE 637


>gb|PKK80576.1| tRNA pseudouridine synthase D [Rhizophagus irregularis]
          Length = 664

 Score =  122 bits (306), Expect = 1e-29
 Identities = 62/75 (82%), Positives = 63/75 (84%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKIMGKP+DLSWKIFKYDDQNI           GKSEPESLPNG NTALRINFSLSASSY
Sbjct: 590 RKIMGKPNDLSWKIFKYDDQNISLSLTDLDLLDGKSEPESLPNGKNTALRINFSLSASSY 649

Query: 183 ATVLLRELMKPTEKE 227
           ATVLLRELMKPTEKE
Sbjct: 650 ATVLLRELMKPTEKE 664


>emb|CEP03890.1| hypothetical protein PBRA_003497 [Plasmodiophora brassicae]
          Length = 634

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 30/70 (42%), Positives = 45/70 (64%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           R ++ KP+D++W + +YDD+             G   PES+P+G + A+R+ FSL +SSY
Sbjct: 539 RHVVVKPTDMNWDVVRYDDKTAPLLLTDMDRMRGAGVPESVPDGAHVAIRLEFSLPSSSY 598

Query: 183 ATVLLRELMK 212
           ATV LRE+MK
Sbjct: 599 ATVFLREVMK 608


>ref|XP_004361680.1| tRNA pseudouridine synthase D [Cavenderia fasciculata]
 gb|EGG23829.1| tRNA pseudouridine synthase D [Cavenderia fasciculata]
          Length = 717

 Score = 67.8 bits (164), Expect = 2e-10
 Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 5/85 (5%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKI+ +P +L +KI++YD   I           GK EP+ LP+G   ALR++FSL +SSY
Sbjct: 575 RKIISRPINLEYKIYRYDSAKIPLALSDLDRLNGKEEPQDLPDGKYKALRLSFSLPSSSY 634

Query: 183 ATVLLRELMK-PT----EKE*FNFE 242
           AT++ REL+K PT    +++ FN E
Sbjct: 635 ATMVYRELLKQPTNVLQQQQQFNHE 659


>ref|XP_023019988.1| pseudouridylate synthase 7 homolog isoform X2 [Leptinotarsa
           decemlineata]
          Length = 626

 Score = 67.0 bits (162), Expect = 3e-10
 Identities = 34/70 (48%), Positives = 43/70 (61%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKI+G+  DLSWKI KYDD              GK EP S+  G   AL + FSL++SSY
Sbjct: 455 RKILGRAKDLSWKIMKYDDPTEDLIRSDFQELQGKPEPVSIEGGKYKALVLEFSLNSSSY 514

Query: 183 ATVLLRELMK 212
           AT++LRE +K
Sbjct: 515 ATMVLREFLK 524


>ref|XP_023019987.1| pseudouridylate synthase 7 homolog isoform X1 [Leptinotarsa
           decemlineata]
          Length = 713

 Score = 67.0 bits (162), Expect = 4e-10
 Identities = 34/70 (48%), Positives = 43/70 (61%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKI+G+  DLSWKI KYDD              GK EP S+  G   AL + FSL++SSY
Sbjct: 542 RKILGRAKDLSWKIMKYDDPTEDLIRSDFQELQGKPEPVSIEGGKYKALVLEFSLNSSSY 601

Query: 183 ATVLLRELMK 212
           AT++LRE +K
Sbjct: 602 ATMVLREFLK 611


>ref|XP_022908215.1| pseudouridylate synthase 7 homolog [Onthophagus taurus]
          Length = 689

 Score = 63.5 bits (153), Expect = 6e-09
 Identities = 31/70 (44%), Positives = 43/70 (61%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RK++ K ++LSWKI KYD  N             + EPE  PNG   AL I+F L +SSY
Sbjct: 545 RKLLRKVNNLSWKIMKYDHPNTDLIRSDFDEYQNRKEPEDDPNGAYKALIIDFCLKSSSY 604

Query: 183 ATVLLRELMK 212
           AT+++RE++K
Sbjct: 605 ATMVIREILK 614


>gb|ORX91940.1| tRNA pseudouridine synthase D [Basidiobolus meristosporus CBS
           931.73]
          Length = 629

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 30/70 (42%), Positives = 42/70 (60%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RK M KP ++SW+  KY D +            G  EP  +P+G + ALR+ FSLS+S Y
Sbjct: 540 RKFMAKPENVSWQTLKYTDADASLAQTDLDRLAGIQEPAGVPDGDHLALRVAFSLSSSQY 599

Query: 183 ATVLLRELMK 212
           AT+ LRE++K
Sbjct: 600 ATMALREILK 609


>gb|ORX67011.1| tRNA pseudouridine synthase D [Basidiobolus meristosporus CBS
           931.73]
          Length = 629

 Score = 62.8 bits (151), Expect = 1e-08
 Identities = 30/70 (42%), Positives = 42/70 (60%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RK M KP ++SW+  KY D +            G  EP  +P+G + ALR+ FSLS+S Y
Sbjct: 540 RKFMAKPENVSWQTLKYTDADASLAQTDLDRLAGIQEPAGVPDGDHLALRVAFSLSSSQY 599

Query: 183 ATVLLRELMK 212
           AT+ LRE++K
Sbjct: 600 ATMALREILK 609


>ref|XP_014670043.1| PREDICTED: pseudouridylate synthase 7 homolog [Priapulus caudatus]
          Length = 644

 Score = 62.4 bits (150), Expect = 1e-08
 Identities = 30/70 (42%), Positives = 44/70 (62%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKI+ KP++LSWK++ Y D  +              EPES+ +G+   LR+ FSL +SSY
Sbjct: 503 RKILVKPTNLSWKLYGYHDNTLPLTLSDLDRLNMVDEPESIADGLFEGLRVEFSLPSSSY 562

Query: 183 ATVLLRELMK 212
           AT+ LRE++K
Sbjct: 563 ATMALREVLK 572


>ref|XP_016605491.1| TruD family tRNA pseudouridine synthase [Spizellomyces punctatus
           DAOM BR117]
 gb|KNC97451.1| TruD family tRNA pseudouridine synthase [Spizellomyces punctatus
           DAOM BR117]
          Length = 766

 Score = 62.0 bits (149), Expect = 2e-08
 Identities = 29/70 (41%), Positives = 41/70 (58%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKI+ KP    WK+ +YDD  +           GK EPES  +G   A+ ++F+L++S Y
Sbjct: 668 RKILAKPKHFDWKLLRYDDPEMDLQLTDMDRVAGKPEPESKDDGKRVAVVLDFTLASSQY 727

Query: 183 ATVLLRELMK 212
           AT+ LRE MK
Sbjct: 728 ATMALRECMK 737


>ref|XP_002127901.1| PREDICTED: pseudouridylate synthase 7 homolog [Ciona intestinalis]
          Length = 624

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 32/70 (45%), Positives = 41/70 (58%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKI+ KP+D+ W I KY+D              G   P    +G  TALRI+FSLS+S Y
Sbjct: 506 RKIINKPNDVEWDIVKYNDYQKPLLASDKDILQGGERPSGEKDGKFTALRISFSLSSSCY 565

Query: 183 ATVLLRELMK 212
           ATV +RE+MK
Sbjct: 566 ATVAMREVMK 575


>ref|XP_020430772.1| tRNA pseudouridine synthase D [Heterostelium album PN500]
 gb|EFA78648.1| tRNA pseudouridine synthase D [Heterostelium album PN500]
          Length = 665

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 32/72 (44%), Positives = 42/72 (58%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RKI+   +D+ +K F+YDD              GK EP+  PNG   ALRI+F+L  SSY
Sbjct: 528 RKIISFANDIQYKTFRYDDYTKALTINDLERLNGKEEPQDQPNGKFRALRISFNLPTSSY 587

Query: 183 ATVLLRELMKPT 218
           AT+  REL+K T
Sbjct: 588 ATMAYRELLKLT 599


>ref|XP_012760214.1| hypothetical protein SAMD00019534_038680, partial [Acytostelium
           subglobosum LB1]
 dbj|GAM20693.1| hypothetical protein SAMD00019534_038680, partial [Acytostelium
           subglobosum LB1]
          Length = 659

 Score = 60.8 bits (146), Expect = 5e-08
 Identities = 29/70 (41%), Positives = 44/70 (62%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RK++   +D+ +K+F+Y+D              GK EP+ +PNG   ALRI+F+L +SSY
Sbjct: 526 RKLISFATDIEYKVFRYNDFTAPLARKDLDKFEGKPEPKDIPNGQFRALRISFNLPSSSY 585

Query: 183 ATVLLRELMK 212
           AT+  REL+K
Sbjct: 586 ATMAYRELLK 595


>ref|XP_003287476.1| hypothetical protein DICPUDRAFT_32540 [Dictyostelium purpureum]
 gb|EGC35975.1| hypothetical protein DICPUDRAFT_32540 [Dictyostelium purpureum]
          Length = 635

 Score = 60.5 bits (145), Expect = 7e-08
 Identities = 30/70 (42%), Positives = 43/70 (61%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RK++   SD ++KIF YDD  I           G +EP  +PNG + ALRI F+L +S+Y
Sbjct: 508 RKLIEHASDCTYKIFNYDDFTIPLALSDIDYLNGSAEPVDVPNGKHKALRICFNLQSSTY 567

Query: 183 ATVLLRELMK 212
           AT+  RE++K
Sbjct: 568 ATMAYREILK 577


>ref|XP_973949.1| PREDICTED: pseudouridylate synthase 7 homolog [Tribolium castaneum]
 gb|EFA08141.1| Pseudouridylate synthase 7 homolog-like Protein [Tribolium
           castaneum]
          Length = 668

 Score = 60.5 bits (145), Expect = 7e-08
 Identities = 30/70 (42%), Positives = 43/70 (61%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RK+MG+  +LSWKI  Y+D N            G+ EP S+  G   AL ++F L +SSY
Sbjct: 523 RKLMGQVQNLSWKIMYYNDPNDNLIRSDLEELKGEKEPASVEGGKYKALLLDFCLDSSSY 582

Query: 183 ATVLLRELMK 212
           AT++LRE++K
Sbjct: 583 ATMVLREILK 592


>ref|XP_011668867.1| PREDICTED: pseudouridylate synthase 7 homolog [Strongylocentrotus
           purpuratus]
          Length = 704

 Score = 60.5 bits (145), Expect = 7e-08
 Identities = 28/70 (40%), Positives = 45/70 (64%)
 Frame = +3

Query: 3   RKIMGKPSDLSWKIFKYDDQNIXXXXXXXXXXXGKSEPESLPNGVNTALRINFSLSASSY 182
           RK + KP+D+SW+++ Y+D  I            K EP+++ +G ++AL+  FSL +S Y
Sbjct: 622 RKCVVKPTDVSWELYNYNDVKIPLVLTDLEKLENKPEPKAVSDGSHSALKAEFSLPSSCY 681

Query: 183 ATVLLRELMK 212
           AT+ LRE+MK
Sbjct: 682 ATMALREVMK 691


Top