BLASTX nr result

ID: Ophiopogon25_contig00054879 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00054879
         (463 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GAU32048.1| hypothetical protein TSUD_214030 [Trifolium subt...    44   2e-07
ref|XP_020251027.1| uncharacterized protein LOC109828435 [Aspara...    40   7e-06

>dbj|GAU32048.1| hypothetical protein TSUD_214030 [Trifolium subterraneum]
          Length = 274

 Score = 44.3 bits (103), Expect(2) = 2e-07
 Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 8/70 (11%)
 Frame = -2

Query: 462 QNQDHRTWLGDPKGCFSVKIVSNSQSEKCC*SQE--------YK*IWRTGAPRKVKVHSW 307
           +++D   W+ DP+GCFSVK   +S S++              +K IW + AP KV + SW
Sbjct: 116 RDEDKWRWVLDPEGCFSVKSAYDSLSKEIVVGSSLRPFESLIFKNIWESPAPSKVIIFSW 175

Query: 306 LVIKDKLNTL 277
            +  D++ T+
Sbjct: 176 QLFYDRVPTM 185



 Score = 38.5 bits (88), Expect(2) = 2e-07
 Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 14/66 (21%)
 Frame = -3

Query: 272 NIRLEG-LSDFGDGKCVWC-KLEESGTHLFLKCQST*TIW------------PP*NITSV 135
           N+ L G L+    G CVWC  + ES THLFL C+    +W             P N+ S+
Sbjct: 187 NLLLRGVLTSNSGGNCVWCGDIRESSTHLFLHCKVALVVWYEIFKWLGVVIIMPPNLFSL 246

Query: 134 LGTRED 117
           LG   D
Sbjct: 247 LGCLSD 252


>ref|XP_020251027.1| uncharacterized protein LOC109828435 [Asparagus officinalis]
          Length = 367

 Score = 39.7 bits (91), Expect(2) = 7e-06
 Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
 Frame = -2

Query: 462 QNQDHRTWLGDPKGCFSVK-----IVSNSQSEKCC*SQEYK*IWRTGAPRKVKVHSWLVI 298
           Q +D R WL +  G FSVK     ++       C        IW+   P KVK+  WL +
Sbjct: 148 QKEDSRIWLWETNGIFSVKSFYQFLIDGGLRFDCAD------IWKLSIPLKVKIMVWLAL 201

Query: 297 KDKLNT 280
           +  LNT
Sbjct: 202 RQSLNT 207



 Score = 37.7 bits (86), Expect(2) = 7e-06
 Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
 Frame = -3

Query: 230 CVWC-KLEESGTHLFLKCQST*TIWPP*NITSVLGTREDLSGSIWDLWNTWERQ*GNT*C 54
           CV C K+EES THLF++C+   ++W        +G ++    S+ ++W  W    GN  C
Sbjct: 222 CVLCSKVEESHTHLFIECEFVFSLWKSIQFKLKIG-KDFKMKSLKEVWLNWTAG-GNKEC 279

Query: 53  QIEWDFL 33
           +++ D L
Sbjct: 280 KMKRDVL 286


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