BLASTX nr result

ID: Ophiopogon25_contig00054856 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00054856
         (388 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX55078.1| hypothetical protein RirG_228650 [Rhizophagus irr...    75   5e-17
gb|PKK59323.1| hypothetical protein RhiirC2_298784 [Rhizophagus ...    56   7e-07

>gb|EXX55078.1| hypothetical protein RirG_228650 [Rhizophagus irregularis DAOM
           197198w]
 gb|EXX55079.1| hypothetical protein RirG_228650 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC20319.1| hypothetical protein RIR_0772300 [Rhizophagus irregularis DAOM
           181602]
 gb|POG74055.1| hypothetical protein GLOIN_2v1580400 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 585

 Score = 74.7 bits (182), Expect(2) = 5e-17
 Identities = 57/139 (41%), Positives = 70/139 (50%), Gaps = 39/139 (28%)
 Frame = +2

Query: 17  KRKKQLSLPKKNKESVELTGSKKVKITDVEMIH------------------PIASNSQSS 142
           KRKKQLSLPKKNKESV    +KK K T                        PI S+SQSS
Sbjct: 138 KRKKQLSLPKKNKESVY--SAKKAKTTKDTPSSSSSSSSQGEPRSSSTPEVPIPSSSQSS 195

Query: 143 EPIGTE-----RFSREVNDV-------------NNP---RPSTPTRQIYSTTANQDLLNR 259
               ++       S  ++ +             N+P   +P TP  QI S + NQDL+ R
Sbjct: 196 SQSSSQGAPNASSSSSISSIPLVISALDPALPGNSPEYDKPHTPPHQICSISDNQDLIKR 255

Query: 260 LKKEKQRAKSTFEPICSNI 316
           LK+EK RAKST+EPICSNI
Sbjct: 256 LKQEKLRAKSTYEPICSNI 274



 Score = 40.4 bits (93), Expect(2) = 5e-17
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +3

Query: 318 VIDTTNKHLMDRLEIKRDYTWVP 386
           +IDTTNK L+DRL+IKRDY W P
Sbjct: 274 IIDTTNKILVDRLKIKRDYKWDP 296


>gb|PKK59323.1| hypothetical protein RhiirC2_298784 [Rhizophagus irregularis]
          Length = 215

 Score = 56.2 bits (134), Expect = 7e-07
 Identities = 34/102 (33%), Positives = 58/102 (56%), Gaps = 8/102 (7%)
 Frame = +2

Query: 8   PSTKRKKQLSLPKKNKESVELTGSKKVKITDVEMIHPIASNSQSSEPIGTERFSREVNDV 187
           P+T+++K LSL +  K +V    +KKVK  + E + P  S++++     ++  S+  +  
Sbjct: 116 PTTQKRKNLSLKRDKKSNVS---AKKVKRAE-ENVDPFFSSNKAEGSTSSDSHSKNTSSS 171

Query: 188 NNP--------RPSTPTRQIYSTTANQDLLNRLKKEKQRAKS 289
            +         R STP  QIYST+ NQ+L+ RL +EK++ KS
Sbjct: 172 RSSPSLERPIARSSTPDHQIYSTSVNQELIKRLNQEKRQVKS 213


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