BLASTX nr result
ID: Ophiopogon25_contig00054773
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00054773
(542 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AQM49936.1| replicase [Agaricus bisporus virus 10] 72 2e-11
ref|YP_009272906.1| RNA-dependent RNA polymerase [Fusarium poae ... 71 5e-11
ref|YP_009047147.1| RNA dependent RNA polymerase [Rosellinia nec... 64 1e-08
ref|YP_009333562.1| polyprotein [Beihai sipunculid worm virus 6]... 62 5e-08
ref|YP_009182158.1| 175 kDa protein [Pleospora typhicola fusariv... 61 2e-07
ref|YP_009222009.1| polyprotein [Alternaria brassicicola fusariv... 60 4e-07
gb|APC23179.1| RNA-dependent RNA polymerase [Sodiomyces alkalinu... 57 5e-06
gb|ATP75829.1| RNA-dependent RNA polymerase [Sodiomyces alkalinu... 56 7e-06
>gb|AQM49936.1| replicase [Agaricus bisporus virus 10]
Length = 1662
Score = 72.4 bits (176), Expect = 2e-11
Identities = 46/116 (39%), Positives = 61/116 (52%), Gaps = 4/116 (3%)
Frame = -1
Query: 398 KEYKGYAREAIKLGNYNKILVFVNSIREGEELRRINPGATCFVHSGQSKIDSNKSIFIAT 219
+EY A + + K LVFVN E + TC + S ID+ IFIAT
Sbjct: 1319 REYMKVAIDLVNAYPRRKFLVFVNDKSEAYSVANSVKSRTCILSSDSKIIDAQAQIFIAT 1378
Query: 218 SVADVGVTFPDVDLVIFCN--RQIAIDNNQLLSYR--ISDLTCKQRDGRTGRTCDG 63
SVADVG+T P VD VI N + + N +++ R + +LT QR GRTGRT +G
Sbjct: 1379 SVADVGLTIPSVDWVITSNIITKSKLSNGEIVIVRCVLDNLTLNQRRGRTGRTNNG 1434
>ref|YP_009272906.1| RNA-dependent RNA polymerase [Fusarium poae fusarivirus 1]
dbj|BAV56303.1| RNA-dependent RNA polymerase [Fusarium poae fusarivirus 1]
Length = 1501
Score = 71.2 bits (173), Expect = 5e-11
Identities = 54/164 (32%), Positives = 84/164 (51%), Gaps = 14/164 (8%)
Frame = -1
Query: 512 VLYMTATPSAFIKSISEIVKPGGQRKFNYVKHELK----MSYKE-YKGYAREAI----KL 360
V+Y++ATP I S + R +N ++ +SYKE + + +A+ L
Sbjct: 1160 VVYLSATPPQDIIDASLHLPLNTARVWNLAVSHMQRKGLLSYKEAWLDFKHQALLLLSSL 1219
Query: 359 GNYNKILVFVNSIREGEELRR-INPGATCFVHSGQSKIDSNKSIFIATSVADVGVTFPDV 183
++ L+FVN+++E EL I A S + + S+ ++TSVADVGVT PDV
Sbjct: 1220 PKASRSLIFVNTVKEANELATAIGSRAVVLSSSSDHSLIHDASVIVSTSVADVGVTIPDV 1279
Query: 182 DLVIFCNRQIAI----DNNQLLSYRISDLTCKQRDGRTGRTCDG 63
D V+ + + DN + + YR+S +QR GRTGRT G
Sbjct: 1280 DTVLTSDIGFTVVEDFDNARGVYYRLSGSQLRQRVGRTGRTNHG 1323
>ref|YP_009047147.1| RNA dependent RNA polymerase [Rosellinia necatrix fusarivirus 1]
dbj|BAP16392.1| RNA dependent RNA polymerase [Rosellinia necatrix fusarivirus 1]
Length = 1542
Score = 64.3 bits (155), Expect = 1e-08
Identities = 44/122 (36%), Positives = 63/122 (51%), Gaps = 10/122 (8%)
Frame = -1
Query: 383 YAREAI----KLGNYNKILVFVNSIREGEELRRINPGATCFVHSGQSKID--SNKSIFIA 222
YA EA+ KL K+L+F ++ E + G FV SG SK S ++ +
Sbjct: 1236 YAAEAVSIVMKLPANAKVLIFSQTVAEATSIAE-RVGRRAFVLSGSSKTGDMSGYNVIVC 1294
Query: 221 TSVADVGVTFPDVDLVIFCNRQIAIDN----NQLLSYRISDLTCKQRDGRTGRTCDGTVY 54
TSVAD G+T PDVD +I + +++ + L YR+S KQR GRTGRT G +
Sbjct: 1295 TSVADTGITIPDVDTIITSDVGFVVEHGVKESSKLYYRLSADDLKQRVGRTGRTNHGQAH 1354
Query: 53 AI 48
+
Sbjct: 1355 VL 1356
>ref|YP_009333562.1| polyprotein [Beihai sipunculid worm virus 6]
gb|APG76084.1| polyprotein [Beihai sipunculid worm virus 6]
Length = 2767
Score = 62.4 bits (150), Expect = 5e-08
Identities = 55/160 (34%), Positives = 76/160 (47%), Gaps = 5/160 (3%)
Frame = -1
Query: 518 PRVLYMTATPSAFIKSISEI---VKPGGQRKFNYVKHELKMSYKEYKGYAREAIKLGNYN 348
P VL +TATP A++K+ + ++P YVK + + L +
Sbjct: 2456 PSVL-LTATPVAWMKNYPHVAVDIEP--LHAVQYVKWTDNLQIQVLNA-------LQTHR 2505
Query: 347 KILVFVNSIREGEELRRI--NPGATCFVHSGQSKIDSNKSIFIATSVADVGVTFPDVDLV 174
++LV S + E L R+ + G T S Q ++ + IATS+ D G+T P VD V
Sbjct: 2506 RLLVIEPSKAKVERLARLFADYGFTALT-STQREVPETGHV-IATSIVDAGITIPGVDCV 2563
Query: 173 IFCNRQIAIDNNQLLSYRISDLTCKQRDGRTGRTCDGTVY 54
I +I D QL RI T QR GRTGRTC GT Y
Sbjct: 2564 IDTAERIVNDQGQLKRVRIDRATQIQRAGRTGRTCPGTYY 2603
>ref|YP_009182158.1| 175 kDa protein [Pleospora typhicola fusarivirus 1]
gb|ALO50136.1| 175 kDa protein [Pleospora typhicola fusarivirus 1]
Length = 1548
Score = 60.8 bits (146), Expect = 2e-07
Identities = 39/119 (32%), Positives = 60/119 (50%), Gaps = 6/119 (5%)
Frame = -1
Query: 344 ILVFVNSIREGEELRRINPGATCFVHSGQSKID--SNKSIFIATSVADVGVTFPDVDLVI 171
ILVF ++ ++ P +C + SG + SN + +TSVADVG+T P+VDLV+
Sbjct: 1258 ILVFCTTLGMCMQMSEQCPRKSCVLSSGTQTVPNISNGMVIFSTSVADVGITLPNVDLVV 1317
Query: 170 FCNRQIAI----DNNQLLSYRISDLTCKQRDGRTGRTCDGTVYAIDCETGIYAPSLDEI 6
+ I D ++ + YR++ QR GRTGRT +G + + LD I
Sbjct: 1318 TSDIGFTIAHDLDGSREVYYRLTKSDITQRAGRTGRTNNGACIVMQTPHARFVTDLDSI 1376
>ref|YP_009222009.1| polyprotein [Alternaria brassicicola fusarivirus 1]
gb|ALW95411.1| polyprotein [Alternaria brassicicola fusarivirus 1]
Length = 1522
Score = 59.7 bits (143), Expect = 4e-07
Identities = 44/137 (32%), Positives = 68/137 (49%), Gaps = 7/137 (5%)
Frame = -1
Query: 422 KHELKMSYKEYKGYAREAIKLGNYN-KILVFVNSIREGEELRRINPGATCFVHSGQS-KI 249
K E + Y G E + L + + + L+FVN +R + PG + S + K
Sbjct: 1238 KFEEQTYLSRYFGAVNEYVDLSHPSTRFLIFVNDLRNIDYFVHRLPGKCVAISSKEEYKE 1297
Query: 248 DSNKSIFIATSVADVGVTFPDVDLVIFCN--RQIAI---DNNQLLSYRISDLTCKQRDGR 84
D + FI+T+VADV +T PD+D+VI N R + + + + +S KQR GR
Sbjct: 1298 DPSARFFISTAVADVAITIPDIDVVITSNVVRGVTLLRDGTTKPIFNALSPSRLKQRRGR 1357
Query: 83 TGRTCDGTVYAIDCETG 33
TGRT +G ++ E G
Sbjct: 1358 TGRTNNGCFVTMNFELG 1374
>gb|APC23179.1| RNA-dependent RNA polymerase [Sodiomyces alkalinus fusarivirus 1]
Length = 1527
Score = 56.6 bits (135), Expect = 5e-06
Identities = 50/165 (30%), Positives = 80/165 (48%), Gaps = 14/165 (8%)
Frame = -1
Query: 515 RVLYMTATPSAFIKSISEIVKPGGQRKFNYVK----HELKMSYKEYKGYAREAIKL---- 360
+VL++TATPS + + S + R + K HE + E+K + E ++
Sbjct: 1185 QVLFLTATPSPNLLARSTHIPLNTARIWQVNKRAEVHEGPRTVHEFKQHYMEEVQAILKE 1244
Query: 359 -GNYNKILVFVNSIREGEELRRINPGATCFVHSGQSKID-SNKSIFIATSVADVGVTFPD 186
+ +K LVF N++ E + + SG + + S+ S+ TSVADVG+T PD
Sbjct: 1245 QPSSSKALVFFNTVAECLAAVELIGSRAAVLSSGVNPLAISSYSVICTTSVADVGLTLPD 1304
Query: 185 VDLVIFCNRQIAIDNNQ----LLSYRISDLTCKQRDGRTGRTCDG 63
V+LVI + + + + R+S +QR GRTGRT G
Sbjct: 1305 VNLVITSDIGFLVRQEKEKVVPMHTRLSHDQIEQRCGRTGRTSHG 1349
>gb|ATP75829.1| RNA-dependent RNA polymerase [Sodiomyces alkalinus fusarivirus 1]
Length = 1470
Score = 56.2 bits (134), Expect = 7e-06
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 14/165 (8%)
Frame = -1
Query: 515 RVLYMTATPSAFIKSISEIVKPGGQRKFNYVK----HELKMSYKEYKGYAREAIKL---- 360
+VL++TATPS + + S + R + K HE + E+K + E ++
Sbjct: 1128 QVLFLTATPSPSLLARSTHIPLNTARIWQVNKRAEVHEGPRTVHEFKQHYMEEVQAILKE 1187
Query: 359 -GNYNKILVFVNSIREGEELRRINPGATCFVHSGQSKID-SNKSIFIATSVADVGVTFPD 186
+ +K LVF N++ E + + SG + + S S+ TSVADVG+T PD
Sbjct: 1188 QPSKSKALVFFNTVAECLAAVELIGSKAAVLSSGVNPLGVSAYSVICTTSVADVGLTLPD 1247
Query: 185 VDLVIFCNRQIAIDNNQ----LLSYRISDLTCKQRDGRTGRTCDG 63
V+LVI + + + + R+S +QR GRTGRT G
Sbjct: 1248 VNLVITSDIGFLVRQEKERVVPMHTRLSHDQIEQRCGRTGRTSHG 1292