BLASTX nr result

ID: Ophiopogon25_contig00054435 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00054435
         (404 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY47847.1| hypothetical protein RhiirA4_523571 [Rhizophagus ...    66   5e-10

>gb|PKY47847.1| hypothetical protein RhiirA4_523571 [Rhizophagus irregularis]
          Length = 346

 Score = 66.2 bits (160), Expect = 5e-10
 Identities = 44/96 (45%), Positives = 49/96 (51%), Gaps = 22/96 (22%)
 Frame = -3

Query: 330 IPLTHVSNXXXXXXXXXXXXD-CLAGITEKDPWDGKVPPKERM---KLKADEY------- 184
           IPL H SN            D CLAGITE+D W G+VPPK      + KADEY       
Sbjct: 160 IPLRHFSNLDEPKKSEDIDLDDCLAGITEEDLWGGEVPPKVEEGTNEAKADEYDEDAFAE 219

Query: 183 -----------EPETDDVPIKIFDDNSEDEEIQNET 109
                      E E DD  IK+FDD+SEDEE QNET
Sbjct: 220 SIKNSYEEMLKEDEYDDASIKVFDDSSEDEESQNET 255


Top