BLASTX nr result

ID: Ophiopogon25_contig00054388 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00054388
         (596 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX55311.1| hypothetical protein RirG_226440 [Rhizophagus irr...    75   2e-13
ref|XP_003889968.1| hypothetical protein PGTG_21437 [Puccinia gr...    54   7e-06

>gb|EXX55311.1| hypothetical protein RirG_226440 [Rhizophagus irregularis DAOM
           197198w]
 gb|EXX55312.1| hypothetical protein RirG_226440 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC42679.1| hypothetical protein RIR_2583400 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC05440.1| hypothetical protein RhiirA5_361321 [Rhizophagus irregularis]
 gb|PKC56753.1| hypothetical protein RhiirA1_428931 [Rhizophagus irregularis]
 gb|PKK59478.1| hypothetical protein RhiirC2_762629 [Rhizophagus irregularis]
 gb|PKY28738.1| hypothetical protein RhiirB3_417350 [Rhizophagus irregularis]
 gb|PKY46417.1| hypothetical protein RhiirA4_402475 [Rhizophagus irregularis]
 gb|POG69369.1| hypothetical protein GLOIN_2v1627940 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 184

 Score = 75.5 bits (184), Expect = 2e-13
 Identities = 52/141 (36%), Positives = 71/141 (50%)
 Frame = +1

Query: 82  KGSRSKKTKTESEQSNSNLPTLKNFLSNAKNLKVVISQPNLXXXXXXXXXXXXXXXXXXX 261
           K + +KK KTE  +++++LP LKNF+  AK+LKVVIS  +                    
Sbjct: 57  KTTGTKKAKTE--KADTSLPALKNFMK-AKDLKVVISYSSTEKEEEHEESSSKKDVEDEK 113

Query: 262 XXXXXXXXXXXXXXVTXXXXXXXXXXXXXVDEILYTIDAKPHKHSTNSYGWTANVPKGKV 441
                          T              +E LYT+ AKP K    SYGW+A  PK K+
Sbjct: 114 DKTDEEETTKNGDAATDNPPTE--------NEPLYTLIAKPQK----SYGWSAAAPKAKI 161

Query: 442 KIEVDGEEIELPVTINLNITV 504
           K+E+DGEE+ELPV+IN NI+V
Sbjct: 162 KVEIDGEEVELPVSINFNISV 182


>ref|XP_003889968.1| hypothetical protein PGTG_21437 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
 gb|EHS63107.1| hypothetical protein PGTG_21437 [Puccinia graminis f. sp. tritici
           CRL 75-36-700-3]
          Length = 149

 Score = 54.3 bits (129), Expect = 7e-06
 Identities = 28/49 (57%), Positives = 34/49 (69%)
 Frame = +1

Query: 370 IDAKPHKHSTNSYGWTANVPKGKVKIEVDGEEIELPVTINLNITVHGSK 516
           I A+P   ST SYGW AN  K +VK+ VDGEE E+ V + LN+TV GSK
Sbjct: 77  ITAEPSTFSTGSYGWKAN-SKIRVKVNVDGEEKEVQVVVGLNMTVSGSK 124


Top