BLASTX nr result

ID: Ophiopogon25_contig00054257 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00054257
         (812 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX76782.1| hypothetical protein RirG_029870 [Rhizophagus irr...    62   3e-08
gb|PKY40487.1| hypothetical protein RhiirA4_538867 [Rhizophagus ...    60   3e-07
gb|PKY25602.1| hypothetical protein RhiirB3_440620 [Rhizophagus ...    57   2e-06
gb|PKB97650.1| hypothetical protein RhiirA5_432718 [Rhizophagus ...    45   3e-06

>gb|EXX76782.1| hypothetical protein RirG_029870 [Rhizophagus irregularis DAOM
           197198w]
          Length = 139

 Score = 61.6 bits (148), Expect = 3e-08
 Identities = 30/31 (96%), Positives = 30/31 (96%)
 Frame = -3

Query: 738 DI*AGINVDKVNDKKLINSAIWGERKFLRAV 646
           DI AGINVDKVNDKKLINSAIWGERKFLRAV
Sbjct: 60  DIQAGINVDKVNDKKLINSAIWGERKFLRAV 90


>gb|PKY40487.1| hypothetical protein RhiirA4_538867 [Rhizophagus irregularis]
          Length = 217

 Score = 60.5 bits (145), Expect = 3e-07
 Identities = 31/35 (88%), Positives = 31/35 (88%)
 Frame = -3

Query: 741 SDI*AGINVDKVNDKKLINSAIWGERKFLRAVVHL 637
           SDI AGINVDKVN KKLINSAIWGERKFLRAV  L
Sbjct: 149 SDIQAGINVDKVNYKKLINSAIWGERKFLRAVQRL 183


>gb|PKY25602.1| hypothetical protein RhiirB3_440620 [Rhizophagus irregularis]
          Length = 171

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 53/141 (37%), Positives = 68/141 (48%), Gaps = 21/141 (14%)
 Frame = -2

Query: 625 ISVYPANITDEAIDEAL---TKVIKRNTK*IC*LSIISNLKRSTTYYYHPQYGTIFTSPI 455
           ++V  ANI D+AIDE L   +KVIKRNTK     SI ++L   T     P     F+S I
Sbjct: 15  LNVASANIIDKAIDEVLIARSKVIKRNTKRARGESI-NSLSFRTCDKLLPSELKNFSSSI 73

Query: 454 CLSQH*TVTN--VLYGLYILKRI----LVFAKQMNGNLYGL*DTN------------HLH 329
               + T  N   LY L+  K+     L+F K+    L  + +              H  
Sbjct: 74  WDRFYITYLNQHALYLLHFEKKRKNNNLIFVKKNEWKLAWIYEIQKQLRETQADSSIHAV 133

Query: 328 KTDPGVRTPFTWYSPTKGVDK 266
             DPGVR PFTWYSPTKG+ K
Sbjct: 134 SIDPGVRAPFTWYSPTKGIGK 154


>gb|PKB97650.1| hypothetical protein RhiirA5_432718 [Rhizophagus irregularis]
 gb|PKY28215.1| hypothetical protein RhiirB3_444277 [Rhizophagus irregularis]
          Length = 207

 Score = 44.7 bits (104), Expect(2) = 3e-06
 Identities = 23/56 (41%), Positives = 33/56 (58%)
 Frame = -2

Query: 433 VTNVLYGLYILKRILVFAKQMNGNLYGL*DTNHLHKTDPGVRTPFTWYSPTKGVDK 266
           ++NV++G Y  +R     KQ       +  + H+   DPG+R PFTWYSP+KGV K
Sbjct: 1   MSNVIFGHYTSRRD---GKQRRVRKTQVDRSLHVVSIDPGIRFPFTWYSPSKGVGK 53



 Score = 35.4 bits (80), Expect(2) = 3e-06
 Identities = 14/26 (53%), Positives = 20/26 (76%)
 Frame = -3

Query: 258 ISRIIRLCTYIDKIISQRDKFYRSTS 181
           I RI+R C ++DK+ S++DK Y STS
Sbjct: 59  IGRIVRTCAFMDKLHSKKDKLYASTS 84


Top