BLASTX nr result

ID: Ophiopogon25_contig00054256 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00054256
         (539 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35533.3| unnamed protein product, partial [Vitis vinifera]      54   2e-06
emb|CBI29564.3| unnamed protein product, partial [Vitis vinifera]      54   2e-06

>emb|CBI35533.3| unnamed protein product, partial [Vitis vinifera]
          Length = 72

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 6   MTKVDARRCQIIIKNSGCVPLECLKKCNEMNLGNGVCLPS-NGGFDNACFCIYNC 167
           M +V A RC  ++  +GC+   C ++C +   GNGVC+P+ NGG++  C C YNC
Sbjct: 20  MKEVKAARCMEVLDPNGCILPSCKQRCLQEKNGNGVCVPNRNGGYE--CICYYNC 72


>emb|CBI29564.3| unnamed protein product, partial [Vitis vinifera]
          Length = 72

 Score = 53.5 bits (127), Expect = 2e-06
 Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
 Frame = +3

Query: 6   MTKVDARRCQIIIKNSGCVPLECLKKCNEMNLGNGVCLPS-NGGFDNACFCIYNC 167
           M +V A RC  ++  +GC+   C ++C +   GNGVC+P+ NGG++  C C YNC
Sbjct: 20  MKEVKAARCMEVLDPNGCILPSCKQRCLQEKNGNGVCVPNRNGGYE--CICYYNC 72


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