BLASTX nr result

ID: Ophiopogon25_contig00054186 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00054186
         (480 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY43338.1| WD40 repeat-like protein [Rhizophagus irregularis]      60   2e-07
gb|EXX56571.1| dynein intermediate chain [Rhizophagus irregulari...    60   2e-07
gb|ORX94506.1| WD40 repeat-like protein [Basidiobolus meristospo...    60   2e-07
gb|EXX59025.1| dynein intermediate chain [Rhizophagus irregulari...    57   1e-06
gb|PKY44283.1| WD40 repeat-like protein [Rhizophagus irregularis]      57   1e-06
gb|PKK74827.1| WD40 repeat-like protein [Rhizophagus irregularis]      57   1e-06
gb|EXX59024.1| dynein intermediate chain [Rhizophagus irregulari...    57   1e-06
dbj|GBC35637.1| Dynein intermediate chain [Rhizophagus irregular...    57   1e-06

>gb|PKY43338.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 634

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -1

Query: 126 RYIPGFAIIETVLLDVPPKELVLYNKEVQTASTSFSTPPLSE 1
           R+IP F   E V+LD+PPKE+V YNKEVQT  TSF  PP SE
Sbjct: 111 RFIPNFITFEAVILDIPPKEIVHYNKEVQTKDTSFEPPPPSE 152


>gb|EXX56571.1| dynein intermediate chain [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC38438.1| Dynein intermediate chain [Rhizophagus irregularis DAOM 181602]
 gb|PKC09517.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKC65446.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKK69342.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKY21679.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|POG60388.1| dynein intermediate chain [Rhizophagus irregularis DAOM 181602=DAOM
           197198]
          Length = 634

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/42 (64%), Positives = 31/42 (73%)
 Frame = -1

Query: 126 RYIPGFAIIETVLLDVPPKELVLYNKEVQTASTSFSTPPLSE 1
           R+IP F   E V+LD+PPKE+V YNKEVQT  TSF  PP SE
Sbjct: 111 RFIPNFITFEAVILDIPPKEIVHYNKEVQTKDTSFEPPPPSE 152


>gb|ORX94506.1| WD40 repeat-like protein [Basidiobolus meristosporus CBS 931.73]
          Length = 629

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -1

Query: 138 LSNPRYIPGFAIIETVLLDVPPKELVLYNKEVQTASTSFSTPPLSE 1
           ++ PR+IP F  +ETV+ D+PPKE V+YNKEVQT   SF  P +SE
Sbjct: 100 VNQPRFIPEFTSVETVIWDLPPKERVIYNKEVQTTECSFDKPEVSE 145


>gb|EXX59025.1| dynein intermediate chain [Rhizophagus irregularis DAOM 197198w]
          Length = 509

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = -1

Query: 138 LSNPRYIPGFAIIETVLLDVPPKELVLYNKEVQTASTSFSTPPLSE 1
           L+  RYIP F+  E V+LD+ PKEL+LY+KEVQT   SF  PP +E
Sbjct: 112 LAPSRYIPDFSSFEAVILDIAPKELILYSKEVQTTERSFGPPPPNE 157


>gb|PKY44283.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 639

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = -1

Query: 138 LSNPRYIPGFAIIETVLLDVPPKELVLYNKEVQTASTSFSTPPLSE 1
           L+  RYIP F+  E V+LD+ PKEL+LY+KEVQT   SF  PP +E
Sbjct: 112 LAPSRYIPDFSSFEAVILDIAPKELILYSKEVQTTERSFGPPPPNE 157


>gb|PKK74827.1| WD40 repeat-like protein [Rhizophagus irregularis]
          Length = 639

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = -1

Query: 138 LSNPRYIPGFAIIETVLLDVPPKELVLYNKEVQTASTSFSTPPLSE 1
           L+  RYIP F+  E V+LD+ PKEL+LY+KEVQT   SF  PP +E
Sbjct: 112 LAPSRYIPDFSSFEAVILDIAPKELILYSKEVQTTERSFGPPPPNE 157


>gb|EXX59024.1| dynein intermediate chain [Rhizophagus irregularis DAOM 197198w]
 gb|PKC08735.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKC63879.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|PKY23606.1| WD40 repeat-like protein [Rhizophagus irregularis]
 gb|POG63196.1| cytoplasmic dynein intermediate chain [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 639

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = -1

Query: 138 LSNPRYIPGFAIIETVLLDVPPKELVLYNKEVQTASTSFSTPPLSE 1
           L+  RYIP F+  E V+LD+ PKEL+LY+KEVQT   SF  PP +E
Sbjct: 112 LAPSRYIPDFSSFEAVILDIAPKELILYSKEVQTTERSFGPPPPNE 157


>dbj|GBC35637.1| Dynein intermediate chain [Rhizophagus irregularis DAOM 181602]
          Length = 642

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = -1

Query: 138 LSNPRYIPGFAIIETVLLDVPPKELVLYNKEVQTASTSFSTPPLSE 1
           L+  RYIP F+  E V+LD+ PKEL+LY+KEVQT   SF  PP +E
Sbjct: 110 LAPSRYIPDFSSFEAVILDIAPKELILYSKEVQTTERSFGPPPPNE 155


Top