BLASTX nr result

ID: Ophiopogon25_contig00053899 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00053899
         (432 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY52751.1| hypothetical protein RhiirA4_425513 [Rhizophagus ...    43   5e-08
gb|PKK61371.1| hypothetical protein RhiirC2_791891 [Rhizophagus ...    42   1e-07

>gb|PKY52751.1| hypothetical protein RhiirA4_425513 [Rhizophagus irregularis]
          Length = 122

 Score = 42.7 bits (99), Expect(2) = 5e-08
 Identities = 21/28 (75%), Positives = 22/28 (78%)
 Frame = -2

Query: 401 LRS*IKKEHKPRFVNIPITEFEVRVIDI 318
           LRS IKKEH PRF NIPITEF VR I +
Sbjct: 35  LRSQIKKEHTPRFDNIPITEFVVRAIPL 62



 Score = 42.0 bits (97), Expect(2) = 5e-08
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 333 PCN*YKVIASVDAEGVLQSVNGGRRDEGRTII 238
           P N  KV+ASV+AEGV+ SVN GR+DEG+ +I
Sbjct: 61  PLNSDKVLASVNAEGVMISVNSGRQDEGQALI 92


>gb|PKK61371.1| hypothetical protein RhiirC2_791891 [Rhizophagus irregularis]
 gb|PKK61713.1| hypothetical protein RhiirC2_718230 [Rhizophagus irregularis]
          Length = 122

 Score = 42.0 bits (97), Expect(2) = 1e-07
 Identities = 20/32 (62%), Positives = 26/32 (81%)
 Frame = -1

Query: 333 PCN*YKVIASVDAEGVLQSVNGGRRDEGRTII 238
           P N  KV+ASV+AEGV+ SVN GR+DEG+ +I
Sbjct: 61  PLNSDKVLASVNAEGVMISVNSGRQDEGQALI 92



 Score = 41.2 bits (95), Expect(2) = 1e-07
 Identities = 20/27 (74%), Positives = 21/27 (77%)
 Frame = -2

Query: 398 RS*IKKEHKPRFVNIPITEFEVRVIDI 318
           RS IKKEH PRF NIPITEF VR I +
Sbjct: 36  RSQIKKEHTPRFDNIPITEFVVRAIPL 62


Top