BLASTX nr result

ID: Ophiopogon25_contig00053811 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00053811
         (487 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|POG74722.1| hypothetical protein GLOIN_2v1770973 [Rhizophagus...    47   2e-06

>gb|POG74722.1| hypothetical protein GLOIN_2v1770973 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 293

 Score = 47.4 bits (111), Expect(2) = 2e-06
 Identities = 38/108 (35%), Positives = 49/108 (45%), Gaps = 4/108 (3%)
 Frame = -3

Query: 365 SIDEALVARKNVIQKNLE---ATXXXXXXXXXXKDLRQTMTICAQNFSKKEWNHFYVKHL 195
           +IDEAL AR  VI++N++   +           KDL+QT+TI AQNFS   + +      
Sbjct: 168 AIDEALTARNEVIKRNIQHAQSESVSSLSFRTRKDLQQTVTIRAQNFSSTVFIN------ 221

Query: 194 HNSSNLSLK*YKPNELKDGKCDLCPFHFETKRKCNKWPL-QKIDCYMK 54
                              K  L   HFE KRK NKWP+  KI C  K
Sbjct: 222 -------------------KRALWTLHFEKKRKNNKWPIPHKISCDSK 250



 Score = 32.0 bits (71), Expect(2) = 2e-06
 Identities = 12/18 (66%), Positives = 13/18 (72%)
 Frame = -1

Query: 55  KTNEWIFYWVYETQKQVC 2
           +TNEW   WVYETQK  C
Sbjct: 256 QTNEWKLAWVYETQKLFC 273


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