BLASTX nr result

ID: Ophiopogon25_contig00053608 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00053608
         (483 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY45741.1| hypothetical protein RhiirA4_517723 [Rhizophagus ...    60   2e-07
gb|PKY20370.1| hypothetical protein RhiirB3_497554 [Rhizophagus ...    57   2e-06

>gb|PKY45741.1| hypothetical protein RhiirA4_517723 [Rhizophagus irregularis]
          Length = 1273

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 30/38 (78%), Positives = 32/38 (84%)
 Frame = -2

Query: 467 KFSQEAKSKVGSSPSSQKAKAKNMCQTLSKTLHSPLTF 354
           + +QEAKSKVGSSPSSQK KAKN CQT SKTL SP TF
Sbjct: 13  ELTQEAKSKVGSSPSSQKIKAKNRCQTPSKTLRSPPTF 50


>gb|PKY20370.1| hypothetical protein RhiirB3_497554 [Rhizophagus irregularis]
          Length = 1272

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 29/38 (76%), Positives = 31/38 (81%)
 Frame = -3

Query: 481 APRNENFPRKLSPKSVQVQARKRPKRKICAKLCLKLFI 368
           APRNENFPRKLSPKSVQVQARKR KRKI   + L L +
Sbjct: 24  APRNENFPRKLSPKSVQVQARKRSKRKIEIDIFLLLLL 61


Top