BLASTX nr result

ID: Ophiopogon25_contig00053232 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00053232
         (460 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD25017.1| hypothetical protein [Oryza sativa Japonica Grou...    67   8e-12
gb|EAY84967.1| hypothetical protein OsI_06332 [Oryza sativa Indi...    67   8e-12
gb|AQK96351.1| hypothetical protein ZEAMMB73_Zm00001d011257 [Zea...    52   3e-06

>dbj|BAD25017.1| hypothetical protein [Oryza sativa Japonica Group]
 gb|EAZ22193.1| hypothetical protein OsJ_05855 [Oryza sativa Japonica Group]
          Length = 66

 Score = 66.6 bits (161), Expect = 8e-12
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = -1

Query: 427 RVRALFLTYAMVAGLLHPFLCRXXXXXXXXXAKTIDGKAIDQAIAYMLMLVALIVTYLV 251
           +V+A+ LTY ++A LLHP LC+         A+T DGK IDQ IAY+LM+VAL+VTYLV
Sbjct: 7   KVQAVILTYVLLAVLLHPLLCQGSPAASLLEAQTSDGKTIDQGIAYILMIVALVVTYLV 65


>gb|EAY84967.1| hypothetical protein OsI_06332 [Oryza sativa Indica Group]
          Length = 66

 Score = 66.6 bits (161), Expect = 8e-12
 Identities = 33/59 (55%), Positives = 43/59 (72%)
 Frame = -1

Query: 427 RVRALFLTYAMVAGLLHPFLCRXXXXXXXXXAKTIDGKAIDQAIAYMLMLVALIVTYLV 251
           +V+A+ LTY ++A LLHP LC+         A+T DGK IDQ IAY+LM+VAL+VTYLV
Sbjct: 7   KVQAVILTYVLLAVLLHPLLCQGSPAAFLLEAQTSDGKTIDQGIAYILMIVALVVTYLV 65


>gb|AQK96351.1| hypothetical protein ZEAMMB73_Zm00001d011257 [Zea mays]
          Length = 67

 Score = 52.4 bits (124), Expect = 3e-06
 Identities = 30/67 (44%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
 Frame = -1

Query: 439 MSFDRVRALFLTYAMVAGLLHPFLCRXXXXXXXXXAK---TIDGKAIDQAIAYMLMLVAL 269
           MS    R   L Y ++A LLHP LC                +D KAIDQ +AY+LML+AL
Sbjct: 1   MSSLTARLALLAYLLLATLLHPCLCHAAAAAPAARGAGNWRMDPKAIDQGVAYVLMLLAL 60

Query: 268 IVTYLVH 248
            VTY+VH
Sbjct: 61  FVTYIVH 67


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