BLASTX nr result

ID: Ophiopogon25_contig00053087 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00053087
         (425 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX70336.1| hypothetical protein RirG_088410 [Rhizophagus irr...    81   3e-17
gb|PKY59986.1| hypothetical protein RhiirA4_412594, partial [Rhi...    79   2e-16

>gb|EXX70336.1| hypothetical protein RirG_088410 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC54217.1| hypothetical protein RIR_3527700 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC16385.1| hypothetical protein RhiirA5_347814 [Rhizophagus irregularis]
 gb|PKC75308.1| hypothetical protein RhiirA1_407979 [Rhizophagus irregularis]
 gb|PKK68263.1| hypothetical protein RhiirC2_750494 [Rhizophagus irregularis]
 gb|PKY18510.1| hypothetical protein RhiirB3_405666 [Rhizophagus irregularis]
          Length = 104

 Score = 81.3 bits (199), Expect = 3e-17
 Identities = 51/104 (49%), Positives = 52/104 (50%), Gaps = 3/104 (2%)
 Frame = +1

Query: 43  MGKSAKFYKRLSKKEKKVQXXXXXXXXXXXXXXXXXXXXXXXXXXXX---AKPSAXXXXX 213
           MGKSAKFYKRLSKKEK VQ                               AKPSA     
Sbjct: 1   MGKSAKFYKRLSKKEKIVQSIISNNDNNNNNIKSESQSSILLSSQDSLNSAKPSATTKIT 60

Query: 214 XXXXXXXXXXXXXNDNGNKNNEKDYVDIFTGKKLHKPLIGRDEK 345
                        N NGNKNNEKDYVDIFTGKKL+K LIGRDEK
Sbjct: 61  KKQNKRKKVKAVTNGNGNKNNEKDYVDIFTGKKLYKSLIGRDEK 104


>gb|PKY59986.1| hypothetical protein RhiirA4_412594, partial [Rhizophagus
           irregularis]
          Length = 101

 Score = 79.3 bits (194), Expect = 2e-16
 Identities = 49/101 (48%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
 Frame = +1

Query: 43  MGKSAKFYKRLSKKEKKVQXXXXXXXXXXXXXXXXXXXXXXXXXXXX--AKPSAXXXXXX 216
           MGKSAKFYKRLSKKEK VQ                              AKPSA      
Sbjct: 1   MGKSAKFYKRLSKKEKIVQSIISNNNNNNNIKSESQSSILLSSQDSLNSAKPSATTKITK 60

Query: 217 XXXXXXXXXXXXNDNGNKNNEKDYVDIFTGKKLHKPLIGRD 339
                       N NGNKNNEKDYVDIFTGK+L+KPLIGRD
Sbjct: 61  KQNKRKKVKAVTNGNGNKNNEKDYVDIFTGKELYKPLIGRD 101


Top