BLASTX nr result

ID: Ophiopogon25_contig00053069 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00053069
         (354 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_020150301.1| vegetative cell wall protein gp1-like [Aegil...    53   6e-06

>ref|XP_020150301.1| vegetative cell wall protein gp1-like [Aegilops tauschii subsp.
           tauschii]
 ref|XP_020152180.1| vegetative cell wall protein gp1-like [Aegilops tauschii subsp.
           tauschii]
          Length = 203

 Score = 53.1 bits (126), Expect = 6e-06
 Identities = 45/122 (36%), Positives = 50/122 (40%), Gaps = 16/122 (13%)
 Frame = +1

Query: 1   PRPRPAQTLSTPCCL--LAAPTHGQPRPVRAPIIANPLPRVGPDRATRSTARP---RLLG 165
           PRP PA   +    L  L    HG PRP RA     P PR        S + P    LL 
Sbjct: 28  PRPAPASATTAVPALRRLGRVRHGSPRPRRA----RPRPRAAASCPAASPSSPCHGLLLT 83

Query: 166 SRHHHP*EPNPCRLLLAD---------TQP--APPTMSTPGLAPTILPLLTSLGRTTPTP 312
              H P  P+P RLLLAD          QP  A P   TP   P +L L     R +P P
Sbjct: 84  GPRHRP-SPHPPRLLLADDASSSSSPKAQPSLAAPCSPTPARTPVLLLLPVPSRRCSPAP 142

Query: 313 PH 318
           PH
Sbjct: 143 PH 144


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