BLASTX nr result

ID: Ophiopogon25_contig00052663 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00052663
         (429 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC41632.1| Pre-mRNA-processing ATP-dependent RNA helicase P...    80   6e-15

>dbj|GBC41632.1| Pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Rhizophagus
           irregularis DAOM 181602]
          Length = 400

 Score = 80.5 bits (197), Expect = 6e-15
 Identities = 37/40 (92%), Positives = 37/40 (92%)
 Frame = -3

Query: 364 KPALFQHPNYLQFWLAYFYYSSYYGLRLITTFQLNMGKYT 245
           KPALFQHPNYLQFWLAYFYYSSYYGLR   TFQLNMGKYT
Sbjct: 364 KPALFQHPNYLQFWLAYFYYSSYYGLR---TFQLNMGKYT 400


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