BLASTX nr result
ID: Ophiopogon25_contig00052641
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00052641
(647 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKY40391.1| beta and beta-prime subunits of DNA dependent RNA... 388 e-123
gb|EXX55206.1| Rpo31p [Rhizophagus irregularis DAOM 197198w] >gi... 387 e-122
gb|PKC18006.1| beta and beta-prime subunits of DNA dependent RNA... 320 7e-98
gb|ORY04347.1| RNA polymerase III largest subunit Rpc1 [Basidiob... 275 6e-82
gb|OBS69655.1| hypothetical protein A6R68_01805 [Neotoma lepida] 233 9e-74
gb|AHJ25860.1| DNA-directed RNA polymerase III subunit RPC1, par... 231 5e-73
gb|AAM12032.1| RNA polymerase III subunit RPC155-D, partial [Hom... 232 8e-73
ref|XP_005893850.1| PREDICTED: DNA-directed RNA polymerase III s... 231 4e-72
ref|XP_009989579.1| PREDICTED: DNA-directed RNA polymerase III s... 228 3e-71
ref|XP_021881486.1| hypothetical protein BCR41DRAFT_353588 [Lobo... 244 8e-71
gb|AAH86344.1| Polr3a protein, partial [Rattus norvegicus] 232 1e-70
ref|XP_010159873.1| PREDICTED: DNA-directed RNA polymerase III s... 228 8e-70
ref|XP_010794066.1| PREDICTED: DNA-directed RNA polymerase III s... 226 3e-69
gb|ORY61989.1| beta and beta-prime subunits of DNA dependent RNA... 239 4e-69
gb|OZJ06503.1| hypothetical protein BZG36_00634 [Bifiguratus ade... 238 6e-69
gb|KFH65268.1| DNA-directed RNA polymerase III subunit C1 [Morti... 238 6e-69
ref|XP_014010783.1| PREDICTED: DNA-directed RNA polymerase III s... 223 6e-69
gb|OAQ27992.1| beta and beta-prime subunits of DNA dependent RNA... 238 8e-69
gb|ORX55348.1| hypothetical protein BCR36DRAFT_581379 [Piromyces... 238 8e-69
ref|XP_010188749.1| PREDICTED: DNA-directed RNA polymerase III s... 228 9e-69
>gb|PKY40391.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Rhizophagus irregularis]
Length = 1415
Score = 388 bits (996), Expect = e-123
Identities = 200/209 (95%), Positives = 200/209 (95%)
Frame = -2
Query: 646 RLQILKRALPKVIVKGIQTVTRAVISEXXXXXXXXLVEGYGLREVMTTEGIVGIETTSNN 467
RLQILKRALPKVIVKGIQTVTRAVISE LVEGYGLREVMTTEGIVGIETTSNN
Sbjct: 1207 RLQILKRALPKVIVKGIQTVTRAVISEGKGGKKLLLVEGYGLREVMTTEGIVGIETTSNN 1266
Query: 466 INEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISN 287
INEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISN
Sbjct: 1267 INEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISN 1326
Query: 286 MKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFEN 107
MKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRK QFEN
Sbjct: 1327 MKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKPQFEN 1386
Query: 106 EKPPKRKLIFDTKENHVKFIYGDTAIDDA 20
EKPPKRKLIFDTKENHVKFIYGDTAIDDA
Sbjct: 1387 EKPPKRKLIFDTKENHVKFIYGDTAIDDA 1415
>gb|EXX55206.1| Rpo31p [Rhizophagus irregularis DAOM 197198w]
dbj|GBC47550.1| DNA-directed RNA polymerase III subunit RPC1 [Rhizophagus irregularis
DAOM 181602]
gb|PKC68317.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Rhizophagus irregularis]
gb|PKK78008.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Rhizophagus irregularis]
gb|PKY20463.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Rhizophagus irregularis]
gb|POG74624.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Rhizophagus irregularis DAOM 181602=DAOM 197198]
Length = 1415
Score = 387 bits (995), Expect = e-122
Identities = 199/209 (95%), Positives = 200/209 (95%)
Frame = -2
Query: 646 RLQILKRALPKVIVKGIQTVTRAVISEXXXXXXXXLVEGYGLREVMTTEGIVGIETTSNN 467
RLQ+LKRALPKVIVKGIQTVTRAVISE LVEGYGLREVMTTEGIVGIETTSNN
Sbjct: 1207 RLQVLKRALPKVIVKGIQTVTRAVISEGKGGKKLLLVEGYGLREVMTTEGIVGIETTSNN 1266
Query: 466 INEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISN 287
INEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISN
Sbjct: 1267 INEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISN 1326
Query: 286 MKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFEN 107
MKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFEN
Sbjct: 1327 MKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFEN 1386
Query: 106 EKPPKRKLIFDTKENHVKFIYGDTAIDDA 20
EKPPKRKLIFDTKENHVKF YGDTAIDDA
Sbjct: 1387 EKPPKRKLIFDTKENHVKFTYGDTAIDDA 1415
>gb|PKC18006.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Rhizophagus irregularis]
Length = 1381
Score = 320 bits (819), Expect = 7e-98
Identities = 166/175 (94%), Positives = 167/175 (95%)
Frame = -2
Query: 646 RLQILKRALPKVIVKGIQTVTRAVISEXXXXXXXXLVEGYGLREVMTTEGIVGIETTSNN 467
RLQ+LKRALPKVIVKGIQTVTRAVISE LVEGYGLREVMTTEGIVGIETTSNN
Sbjct: 1207 RLQVLKRALPKVIVKGIQTVTRAVISEGKGGKKLLLVEGYGLREVMTTEGIVGIETTSNN 1266
Query: 466 INEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISN 287
INEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISN
Sbjct: 1267 INEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISN 1326
Query: 286 MKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRK 122
MKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRK
Sbjct: 1327 MKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRK 1381
>gb|ORY04347.1| RNA polymerase III largest subunit Rpc1 [Basidiobolus meristosporus
CBS 931.73]
Length = 1393
Score = 275 bits (704), Expect = 6e-82
Identities = 144/196 (73%), Positives = 162/196 (82%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVISEXXXXXXXXLVEGYGLREVMTTEGIVGIETTSNNI 464
LQ LKRALP+VI+KGI +V RAVISE LVEGYGLREVMTTEGIVG ETTSN++
Sbjct: 1198 LQALKRALPQVIIKGIPSVNRAVISEVTGGKVQLLVEGYGLREVMTTEGIVGTETTSNHV 1257
Query: 463 NEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISNM 284
E+ KVLGIEAARNTI EIQYTM +HGM+IDPRHVMLLGDIMT+KGEVLGI RFGI+ M
Sbjct: 1258 MEIQKVLGIEAARNTICHEIQYTMSKHGMTIDPRHVMLLGDIMTYKGEVLGITRFGIAKM 1317
Query: 283 KSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFENE 104
K SVLMLASFEKTTDHLFDAA+++KRD +EGVSE IIMG+PM +GTGLFKLI KS+ E
Sbjct: 1318 KDSVLMLASFEKTTDHLFDAAMYAKRDSIEGVSECIIMGIPMPIGTGLFKLIHKSEQET- 1376
Query: 103 KPPKRKLIFDTKENHV 56
P R L+FD E HV
Sbjct: 1377 LPKPRSLLFDNPEFHV 1392
>gb|OBS69655.1| hypothetical protein A6R68_01805 [Neotoma lepida]
Length = 254
Score = 233 bits (593), Expect = 9e-74
Identities = 126/202 (62%), Positives = 146/202 (72%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G TTS
Sbjct: 53 LQFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKFKLLVEGDNLRAVMATHGVKGTRTTS 112
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR TII EIQYTM HGMSID RHVMLL D+MT+KGEVLGI RFG+
Sbjct: 113 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL 172
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K+
Sbjct: 173 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAN- 231
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
+ KPP+R LIFDT E H+ +
Sbjct: 232 RDPKPPRRPLIFDTNEFHIPLV 253
>gb|AHJ25860.1| DNA-directed RNA polymerase III subunit RPC1, partial [Panthera
tigris altaica]
Length = 255
Score = 231 bits (588), Expect = 5e-73
Identities = 125/202 (61%), Positives = 145/202 (71%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G TTS
Sbjct: 54 LQFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTS 113
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR TII EIQYTM HGMSID RHVMLL D+MT+KGEVLGI RFG+
Sbjct: 114 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL 173
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K+
Sbjct: 174 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAD- 232
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
+ PP+R LIFDT E H+ +
Sbjct: 233 RDPSPPRRPLIFDTNEFHIPLV 254
>gb|AAM12032.1| RNA polymerase III subunit RPC155-D, partial [Homo sapiens]
Length = 299
Score = 232 bits (591), Expect = 8e-73
Identities = 126/202 (62%), Positives = 145/202 (71%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G TTS
Sbjct: 98 LQFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTS 157
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR TII EIQYTM HGMSID RHVMLL D+MT+KGEVLGI RFG+
Sbjct: 158 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL 217
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K+
Sbjct: 218 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAD- 276
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
+ PPKR LIFDT E H+ +
Sbjct: 277 RDPNPPKRPLIFDTNEFHIPLV 298
>ref|XP_005893850.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC1, partial
[Bos mutus]
Length = 319
Score = 231 bits (588), Expect = 4e-72
Identities = 125/202 (61%), Positives = 145/202 (71%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G TTS
Sbjct: 118 LQFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTRTTS 177
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR TII EIQYTM HGMSID RHVMLL D+MT+KGEVLGI RFG+
Sbjct: 178 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL 237
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K+
Sbjct: 238 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAN- 296
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
+ PP+R LIFDT E H+ +
Sbjct: 297 RDPSPPRRPLIFDTNEFHIPLV 318
>ref|XP_009989579.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC1-like,
partial [Tauraco erythrolophus]
Length = 309
Score = 228 bits (581), Expect = 3e-71
Identities = 124/202 (61%), Positives = 146/202 (72%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G +T+S
Sbjct: 108 LQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS 167
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR TII EIQYTM HGMSID RHVMLL D+MT+KGEVLGI RFG+
Sbjct: 168 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL 227
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K+
Sbjct: 228 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK 287
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
E+ PP+R LIFD E H+ +
Sbjct: 288 ES-TPPRRPLIFDNNEFHIPIV 308
>ref|XP_021881486.1| hypothetical protein BCR41DRAFT_353588 [Lobosporangium transversale]
gb|ORZ16139.1| hypothetical protein BCR41DRAFT_353588 [Lobosporangium transversale]
Length = 1394
Score = 244 bits (622), Expect = 8e-71
Identities = 123/189 (65%), Positives = 151/189 (79%), Gaps = 2/189 (1%)
Frame = -2
Query: 634 LKRALPKVIVKGIQTVTRAVISEXXXXXXXXL--VEGYGLREVMTTEGIVGIETTSNNIN 461
LKRALP++I+KG+ V RAVI+E VEGYGLRE+M TEG+VG +T SN++
Sbjct: 1205 LKRALPEIIIKGLPQVNRAVINEIQGSGGKKELLVEGYGLRELMNTEGVVGTQTRSNHVM 1264
Query: 460 EVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISNMK 281
EV KVLGIEAAR TI+ EI+ M HG++IDPRHVMLLGDIMT KGEVLGI RFGI+ MK
Sbjct: 1265 EVWKVLGIEAARRTILDEIKSVMDSHGLTIDPRHVMLLGDIMTSKGEVLGITRFGIAKMK 1324
Query: 280 SSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFENEK 101
SV+MLASFEKTTDHLF+AAL+SK+D +EGVSE IIMG+PM +GTGLFKLI++ +
Sbjct: 1325 DSVMMLASFEKTTDHLFEAALYSKKDAIEGVSECIIMGIPMSIGTGLFKLIKRDSAHDRI 1384
Query: 100 PPKRKLIFD 74
PP+R+L+FD
Sbjct: 1385 PPRRRLLFD 1393
>gb|AAH86344.1| Polr3a protein, partial [Rattus norvegicus]
Length = 491
Score = 232 bits (592), Expect = 1e-70
Identities = 126/202 (62%), Positives = 146/202 (72%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G TTS
Sbjct: 290 LQFLKEDLPKVVVQGIPEVSRAVIHIDEQSGKEKFKLLVEGDNLRAVMATHGVKGTRTTS 349
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR TII EIQYTM HGMSID RHVMLL D+MT+KGEVLGI RFG+
Sbjct: 350 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL 409
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K+
Sbjct: 410 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAN- 468
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
+ KPP+R LIFDT E H+ +
Sbjct: 469 RDPKPPRRPLIFDTHEFHIPLV 490
>ref|XP_010159873.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC1-like,
partial [Eurypyga helias]
Length = 423
Score = 228 bits (581), Expect = 8e-70
Identities = 124/202 (61%), Positives = 146/202 (72%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G +T+S
Sbjct: 222 LQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS 281
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR TII EIQYTM HGMSID RHVMLL D+MT+KGEVLGI RFG+
Sbjct: 282 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL 341
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K+
Sbjct: 342 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK 401
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
E+ PP+R LIFD E H+ +
Sbjct: 402 ES-TPPRRPLIFDNNEFHIPIV 422
>ref|XP_010794066.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC1-like
[Notothenia coriiceps]
Length = 421
Score = 226 bits (577), Expect = 3e-69
Identities = 122/202 (60%), Positives = 148/202 (73%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G +TTS
Sbjct: 220 LQQLKGELPKVVVQGIPEVSRAVIHIDEQSTKTMYKLLVEGDNLRSVMATHGVKGSKTTS 279
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR+TII EIQYTM HGMSID RHVMLLGD+M++KGE+LGI RFG+
Sbjct: 280 NNTYEVEKTLGIEAARSTIINEIQYTMSNHGMSIDRRHVMLLGDLMSYKGEILGITRFGL 339
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K++
Sbjct: 340 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAE- 398
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
++ P KR L+FD + H+ I
Sbjct: 399 KDPSPVKRPLLFDNADFHIPLI 420
>gb|ORY61989.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Neocallimastix californiae]
Length = 1395
Score = 239 bits (609), Expect = 4e-69
Identities = 121/197 (61%), Positives = 156/197 (79%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVISEXXXXXXXXLVEGYGLREVMTTEGIVGIETTSNNI 464
L+ LKRALPKVI+KGI ++ RAVI+E VEGYGLREVM +GI G+E+++N+I
Sbjct: 1201 LEALKRALPKVIIKGIPSINRAVINEEKDGLKLL-VEGYGLREVMAIDGINGLESSTNHI 1259
Query: 463 NEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISNM 284
E+ VLGIEAARN+II+EIQYTM HGM +D RH MLL D+MTFKGE+LGI RFGI+ M
Sbjct: 1260 IEMQHVLGIEAARNSIIKEIQYTMQSHGMQLDFRHCMLLSDLMTFKGEILGITRFGIAKM 1319
Query: 283 KSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFENE 104
K SVLMLASFEKTTDHLFDA+ + K+D ++GVSE +IMG+PM +GTG+FKL++K+ E E
Sbjct: 1320 KDSVLMLASFEKTTDHLFDASFYGKKDSIDGVSECVIMGIPMHVGTGIFKLLQKT--EKE 1377
Query: 103 KPPKRKLIFDTKENHVK 53
P L+FD+K +H++
Sbjct: 1378 LPKPHTLLFDSKTHHLR 1394
>gb|OZJ06503.1| hypothetical protein BZG36_00634 [Bifiguratus adelaidae]
Length = 1582
Score = 238 bits (608), Expect = 6e-69
Identities = 130/197 (65%), Positives = 151/197 (76%), Gaps = 2/197 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVISEXXXXXXXXL--VEGYGLREVMTTEGIVGIETTSN 470
L+ LKR+L V++KG+ V RAVISE VEGYGLR+VMTTEGIVG +TTSN
Sbjct: 1143 LRNLKRSLTNVVIKGLHEVRRAVISEKEGGKGEKQLLVEGYGLRDVMTTEGIVGEKTTSN 1202
Query: 469 NINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGIS 290
+I +V KVLGIEAAR TII EIQ TM HGM+IDPRH LL D+MT KGEVLGI RFGI+
Sbjct: 1203 HIMDVQKVLGIEAARATIIYEIQRTMEMHGMTIDPRHTKLLADVMTSKGEVLGITRFGIA 1262
Query: 289 NMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFE 110
MK SVLMLASFEKTTDHLFDA+L+SK D +EGVSE IIMG+PM +GTGLFKLI + E
Sbjct: 1263 KMKDSVLMLASFEKTTDHLFDASLYSKCDAIEGVSEQIIMGIPMSIGTGLFKLIYTPE-E 1321
Query: 109 NEKPPKRKLIFDTKENH 59
+KP R+L+FD E H
Sbjct: 1322 EKKPAPRQLLFDHPEFH 1338
>gb|KFH65268.1| DNA-directed RNA polymerase III subunit C1 [Mortierella verticillata
NRRL 6337]
Length = 1394
Score = 238 bits (608), Expect = 6e-69
Identities = 122/189 (64%), Positives = 148/189 (78%), Gaps = 2/189 (1%)
Frame = -2
Query: 634 LKRALPKVIVKGIQTVTRAVISEXXXXXXXXL--VEGYGLREVMTTEGIVGIETTSNNIN 461
LKR LP +I+KG+ V RAVI+E VEGYGLRE+M TEG+VG +T SN++
Sbjct: 1205 LKRQLPDIIIKGLPQVNRAVINEIQGSGGRKELLVEGYGLRELMNTEGVVGTQTRSNHVM 1264
Query: 460 EVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISNMK 281
EV KVLGIEAAR TI+ EI+ M HG++IDPRHVMLLGDIMT KGEVLGI RFGI+ MK
Sbjct: 1265 EVWKVLGIEAARRTILDEIKSVMDSHGLTIDPRHVMLLGDIMTSKGEVLGITRFGIAKMK 1324
Query: 280 SSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFENEK 101
SV+MLASFEKTTDHLF+AAL+SK+D +EGVSE IIMG+PM +GTGLFKLI++ ++
Sbjct: 1325 DSVMMLASFEKTTDHLFEAALYSKKDAIEGVSECIIMGIPMSIGTGLFKLIKRDDAQDRI 1384
Query: 100 PPKRKLIFD 74
P RKL+FD
Sbjct: 1385 PISRKLLFD 1393
>ref|XP_014010783.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC1-like,
partial [Salmo salar]
Length = 334
Score = 223 bits (568), Expect = 6e-69
Identities = 120/202 (59%), Positives = 147/202 (72%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G TTS
Sbjct: 133 LQSLKDNLPKVVVQGIPEVSRAVIHIDEQTGKNKYKLLVEGDNLRSVMATHGVNGNRTTS 192
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR+TII EIQYTM HGMSID RHVMLL D+M++KGE+LGI RFG+
Sbjct: 193 NNTYEVEKTLGIEAARSTIINEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL 252
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K+
Sbjct: 253 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKAD- 311
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
++ PP+R L+FD+ + H+ +
Sbjct: 312 KDPTPPRRPLLFDSADFHIPLV 333
>gb|OAQ27992.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
[Mortierella elongata AG-77]
Length = 1394
Score = 238 bits (607), Expect = 8e-69
Identities = 121/189 (64%), Positives = 149/189 (78%), Gaps = 2/189 (1%)
Frame = -2
Query: 634 LKRALPKVIVKGIQTVTRAVISEXXXXXXXXL--VEGYGLREVMTTEGIVGIETTSNNIN 461
LKR LP +I+KG+ V RAVI+E VEGYGLRE+M TEG+VG +T SN++
Sbjct: 1205 LKRQLPDIIIKGLPQVNRAVINEIQGSGGKKELLVEGYGLRELMNTEGVVGTQTRSNHVM 1264
Query: 460 EVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISNMK 281
EV KVLGIEAAR TI+ EI+ M HG++IDPRHVMLLGDIMT KGEVLGI RFGI+ MK
Sbjct: 1265 EVWKVLGIEAARRTILDEIKSVMDSHGLTIDPRHVMLLGDIMTSKGEVLGITRFGIAKMK 1324
Query: 280 SSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFENEK 101
SV+MLASFEKTTDHLF+A+L+SK+D +EGVSE IIMG+PM +GTGLFKLI++ ++
Sbjct: 1325 DSVMMLASFEKTTDHLFEASLYSKKDAIEGVSECIIMGIPMSIGTGLFKLIKRDDAQDRI 1384
Query: 100 PPKRKLIFD 74
P +RKL+FD
Sbjct: 1385 PIRRKLLFD 1393
>gb|ORX55348.1| hypothetical protein BCR36DRAFT_581379 [Piromyces finnis]
Length = 1395
Score = 238 bits (607), Expect = 8e-69
Identities = 119/197 (60%), Positives = 157/197 (79%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVISEXXXXXXXXLVEGYGLREVMTTEGIVGIETTSNNI 464
L+ LKRALPKVI+KGI ++ RAVI+E VEGYGLREVM +G+ G+E+++N+I
Sbjct: 1201 LEALKRALPKVIIKGIPSINRAVINEEKDGLKLL-VEGYGLREVMAIDGVNGLESSTNHI 1259
Query: 463 NEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGISNM 284
E+ +VLGIEAARN+II+EIQYTM HGM +D RH MLL D+MTFKGE+LGI RFGI+ M
Sbjct: 1260 IEMQQVLGIEAARNSIIKEIQYTMQSHGMQLDFRHCMLLSDLMTFKGEILGITRFGIAKM 1319
Query: 283 KSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQFENE 104
K SVLMLASFEKTTDHLFDA+ + K+D ++GVSE +IMG+PM +GTG+FKL++K+ E E
Sbjct: 1320 KDSVLMLASFEKTTDHLFDASFYGKKDSIDGVSECVIMGIPMHVGTGIFKLLQKT--EKE 1377
Query: 103 KPPKRKLIFDTKENHVK 53
P L+FD++ +H++
Sbjct: 1378 LPKPHNLLFDSQTHHLR 1394
>ref|XP_010188749.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC1-like,
partial [Mesitornis unicolor]
Length = 518
Score = 228 bits (581), Expect = 9e-69
Identities = 124/202 (61%), Positives = 146/202 (72%), Gaps = 3/202 (1%)
Frame = -2
Query: 643 LQILKRALPKVIVKGIQTVTRAVI---SEXXXXXXXXLVEGYGLREVMTTEGIVGIETTS 473
LQ LK LPKV+V+GI V+RAVI + LVEG LR VM T G+ G +T+S
Sbjct: 317 LQSLKEELPKVVVQGIPEVSRAVIHIDEQSGKEKYKLLVEGDNLRAVMATHGVKGTKTSS 376
Query: 472 NNINEVHKVLGIEAARNTIIQEIQYTMGRHGMSIDPRHVMLLGDIMTFKGEVLGIHRFGI 293
NN EV K LGIEAAR TII EIQYTM HGMSID RHVMLL D+MT+KGEVLGI RFG+
Sbjct: 377 NNTYEVEKTLGIEAARTTIINEIQYTMVNHGMSIDRRHVMLLSDLMTYKGEVLGITRFGL 436
Query: 292 SNMKSSVLMLASFEKTTDHLFDAALHSKRDCLEGVSESIIMGMPMQLGTGLFKLIRKSQF 113
+ MK SVLMLASFEKT DHLFDAA ++D + GVSE IIMG+PM +GTGLFKL+ K+
Sbjct: 437 AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHKADK 496
Query: 112 ENEKPPKRKLIFDTKENHVKFI 47
E+ PP+R LIFD E H+ +
Sbjct: 497 ES-TPPRRPLIFDNNEFHIPIV 517