BLASTX nr result

ID: Ophiopogon25_contig00052629 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00052629
         (872 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC15509.1| Elongation factor 1 alpha-like protein [Rhizopha...   477   e-159
gb|POG57760.1| hypothetical protein GLOIN_2v991201 [Rhizophagus ...   378   e-128
gb|PKK65660.1| hypothetical protein RhiirC2_59392 [Rhizophagus i...   357   e-122

>dbj|GBC15509.1| Elongation factor 1 alpha-like protein [Rhizophagus irregularis DAOM
            181602]
          Length = 1007

 Score =  477 bits (1228), Expect = e-159
 Identities = 254/294 (86%), Positives = 255/294 (86%), Gaps = 4/294 (1%)
 Frame = +3

Query: 3    SNVDHGKRYPSPVVFGANQRNPESHHLLENKTRTIFANCVSPNDIWMGHDVKWCSLTPNK 182
            SNVDHGKRYPSPVVFGANQRNPESHHLLENKTRTIFANCVSPNDIWMGHDVKWCSLTPNK
Sbjct: 133  SNVDHGKRYPSPVVFGANQRNPESHHLLENKTRTIFANCVSPNDIWMGHDVKWCSLTPNK 192

Query: 183  LMFAENSIHEMQKILHYGGLLGGADSEKPKSTQSKLSSLHSQLDSTNDMFSTRTTNEHKR 362
            LMFAENSIHEMQ+ LHYGGLLGGADSEKPKSTQSKLSSLHSQLDSTNDMFSTRTTNEHKR
Sbjct: 193  LMFAENSIHEMQQNLHYGGLLGGADSEKPKSTQSKLSSLHSQLDSTNDMFSTRTTNEHKR 252

Query: 363  FSARINNNIDSQLNVGESSFSKPEIRXXXXXXXXXAQLNMKQSIRPSLSSMATNXXXXXX 542
            FS RINNNIDSQLNVGESSFSKPEIR         AQLNMKQSIRPSLSSMATN      
Sbjct: 253  FSVRINNNIDSQLNVGESSFSKPEIRSSELSLSSLAQLNMKQSIRPSLSSMATNTTLKLE 312

Query: 543  XXXXXXXXXXXXXXXAPSLSSLAQKSILQSSGRVSLTRLASKKLDNRSPLQKTMTPIISS 722
                           APSLSSLAQKSILQSSGRVSLTRLASKKLDNRSPLQKTMTPII S
Sbjct: 313  SSKSQTSSSLQLNSQAPSLSSLAQKSILQSSGRVSLTRLASKKLDNRSPLQKTMTPII-S 371

Query: 723  KQSKTL-SDTNCLHDSTALSSSSEIVNEVSQPIMND---EITQSKEFIQNSHQL 872
            KQSKTL SDTNCLHDST LSSSSEIVNEVSQ IMND   EITQSKEFIQNSHQL
Sbjct: 372  KQSKTLSSDTNCLHDSTTLSSSSEIVNEVSQTIMNDQISEITQSKEFIQNSHQL 425


>gb|POG57760.1| hypothetical protein GLOIN_2v991201 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 336

 Score =  378 bits (971), Expect = e-128
 Identities = 208/248 (83%), Positives = 209/248 (84%), Gaps = 4/248 (1%)
 Frame = +3

Query: 141 MGHDVKWCSLTPNKLMFAENSIHEMQKILHYGGLLGGADSEKPKSTQSKLSSLHSQLDST 320
           MGHDVKWCSLTPNKLMFAENSIHEMQ+ LHYGGLLGGADSEKPKSTQSKLSSLHSQLDST
Sbjct: 1   MGHDVKWCSLTPNKLMFAENSIHEMQQNLHYGGLLGGADSEKPKSTQSKLSSLHSQLDST 60

Query: 321 NDMFSTRTTNEHKRFSARINNNIDSQLNVGESSFSKPEIRXXXXXXXXXAQLNMKQSIRP 500
           NDMFSTRTTNEHKRFS RINNNIDSQLNVGESSFSKPEIR         AQLNMKQSIRP
Sbjct: 61  NDMFSTRTTNEHKRFSVRINNNIDSQLNVGESSFSKPEIRSSELSLSSLAQLNMKQSIRP 120

Query: 501 SLSSMATNXXXXXXXXXXXXXXXXXXXXXAPSLSSLAQKSILQSSGRVSLTRLASKKLDN 680
           SLSSMATN                     APSLSSLAQKSILQSSGRVSLTRLASKKLDN
Sbjct: 121 SLSSMATNTTLKLESSKSQTSSSLQLNSQAPSLSSLAQKSILQSSGRVSLTRLASKKLDN 180

Query: 681 RSPLQKTMTPIISSKQSKTL-SDTNCLHDSTALSSSSEIVNEVSQPIMND---EITQSKE 848
           RSPLQKTMTPII SKQSKTL SDTNCLHDST LSSSSEIVNEVSQ IMND   EITQSKE
Sbjct: 181 RSPLQKTMTPII-SKQSKTLSSDTNCLHDSTTLSSSSEIVNEVSQTIMNDQISEITQSKE 239

Query: 849 FIQNSHQL 872
           FIQNSHQL
Sbjct: 240 FIQNSHQL 247


>gb|PKK65660.1| hypothetical protein RhiirC2_59392 [Rhizophagus irregularis]
          Length = 231

 Score =  357 bits (916), Expect = e-122
 Identities = 194/232 (83%), Positives = 196/232 (84%), Gaps = 1/232 (0%)
 Frame = +3

Query: 141 MGHDVKWCSLTPNKLMFAENSIHEMQKILHYGGLLGGADSEKPKSTQSKLSSLHSQLDST 320
           MGHDVKWCSLTPNKLMFAENSIHEMQ+ LHYGGLLGGADSEKPKSTQSKLSSLHSQLDST
Sbjct: 1   MGHDVKWCSLTPNKLMFAENSIHEMQQNLHYGGLLGGADSEKPKSTQSKLSSLHSQLDST 60

Query: 321 NDMFSTRTTNEHKRFSARINNNIDSQLNVGESSFSKPEIRXXXXXXXXXAQLNMKQSIRP 500
           NDMFSTRTTNEHKRFS RINNNIDSQLNVGESSFSKPEIR         AQLNMKQSIRP
Sbjct: 61  NDMFSTRTTNEHKRFSVRINNNIDSQLNVGESSFSKPEIRSSELSLSSLAQLNMKQSIRP 120

Query: 501 SLSSMATNXXXXXXXXXXXXXXXXXXXXXAPSLSSLAQKSILQSSGRVSLTRLASKKLDN 680
           SLSSMATN                     APSLSSLAQKSILQSSGRVSLTRLASKKLDN
Sbjct: 121 SLSSMATNTTLKLESSKSQTSSSLQLNSQAPSLSSLAQKSILQSSGRVSLTRLASKKLDN 180

Query: 681 RSPLQKTMTPIISSKQSKTL-SDTNCLHDSTALSSSSEIVNEVSQPIMNDEI 833
           RSPLQKTMTPII SKQSKTL SDTNCLHDST LSSSSEIVNEVSQ IMND+I
Sbjct: 181 RSPLQKTMTPII-SKQSKTLSSDTNCLHDSTTLSSSSEIVNEVSQTIMNDQI 231


Top