BLASTX nr result
ID: Ophiopogon25_contig00052559
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00052559
(503 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKK70560.1| Sec34-domain-containing protein [Rhizophagus irre... 77 8e-21
gb|PKY47036.1| Sec34-domain-containing protein [Rhizophagus irre... 77 1e-20
dbj|GBC25380.1| Conserved oligomeric Golgi complex subunit 3 [Rh... 77 1e-20
gb|EXX74982.1| Cog3p [Rhizophagus irregularis DAOM 197198w] 77 1e-20
>gb|PKK70560.1| Sec34-domain-containing protein [Rhizophagus irregularis]
Length = 854
Score = 77.4 bits (189), Expect(3) = 8e-21
Identities = 59/142 (41%), Positives = 64/142 (45%), Gaps = 31/142 (21%)
Frame = +1
Query: 142 LSDLGPGTP*RTVLPTQFSVKDNLKQITYSRLN----------RXXXXXXXXXXXXXXTS 291
LSDLGPG+P RT PT SVKDNLKQ +YSRL+ TS
Sbjct: 47 LSDLGPGSPQRTASPTPSSVKDNLKQSSYSRLSTSPLPKSRSTTNLLAAEFQADEAAATS 106
Query: 292 TPDASLGIPH---------------------QNGGCL*KFLTVVTMYREACSKFWNKLIL 408
TPDASLGIP FLTVVTMYREACSKF ++
Sbjct: 107 TPDASLGIPQPIETTQQFFDWFARMEADMEKDQEDVYRNFLTVVTMYREACSKFLEQIDT 166
Query: 409 Q*NYLMI*IVIFKLVEEGTKAL 474
FK VEE TKAL
Sbjct: 167 TVKLFNDLDSNFKFVEERTKAL 188
Score = 49.3 bits (116), Expect(3) = 8e-21
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 21 MATTISQFKGITLEEWDAKAKLTEL*NYEIL 113
MATTISQ+KGITLEEW+AK KLTEL +L
Sbjct: 1 MATTISQYKGITLEEWEAKTKLTELQRQSVL 31
Score = 21.2 bits (43), Expect(3) = 8e-21
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 92 IIKLRDTCTELPPEE 136
+++L+D C ELP E
Sbjct: 30 VLELQDACAELPLPE 44
>gb|PKY47036.1| Sec34-domain-containing protein [Rhizophagus irregularis]
Length = 857
Score = 76.6 bits (187), Expect(3) = 1e-20
Identities = 59/142 (41%), Positives = 63/142 (44%), Gaps = 31/142 (21%)
Frame = +1
Query: 142 LSDLGPGTP*RTVLPTQFSVKDNLKQITYSRLN----------RXXXXXXXXXXXXXXTS 291
LSDLGPG+P RT PT SVKDNLKQ YSRL+ TS
Sbjct: 47 LSDLGPGSPQRTASPTPSSVKDNLKQSPYSRLSTSPLPKSRSTTNLLAAEFQADEAAATS 106
Query: 292 TPDASLGIPH---------------------QNGGCL*KFLTVVTMYREACSKFWNKLIL 408
TPDASLGIP FLTVVTMYREACSKF ++
Sbjct: 107 TPDASLGIPQPIETTQQFFDWFARMEADMEKDQEDVYRNFLTVVTMYREACSKFLEQIDT 166
Query: 409 Q*NYLMI*IVIFKLVEEGTKAL 474
FK VEE TKAL
Sbjct: 167 TVKLFNDLDSNFKFVEERTKAL 188
Score = 49.3 bits (116), Expect(3) = 1e-20
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 21 MATTISQFKGITLEEWDAKAKLTEL*NYEIL 113
MATTISQ+KGITLEEW+AK KLTEL +L
Sbjct: 1 MATTISQYKGITLEEWEAKTKLTELQRQSVL 31
Score = 21.2 bits (43), Expect(3) = 1e-20
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 92 IIKLRDTCTELPPEE 136
+++L+D C ELP E
Sbjct: 30 VLELQDACAELPLPE 44
>dbj|GBC25380.1| Conserved oligomeric Golgi complex subunit 3 [Rhizophagus
irregularis DAOM 181602]
gb|PKC10313.1| Sec34-domain-containing protein [Rhizophagus irregularis]
gb|PKC76404.1| Sec34-domain-containing protein [Rhizophagus irregularis]
gb|PKY23241.1| Sec34-domain-containing protein [Rhizophagus irregularis]
gb|POG71648.1| conserved oligomeric Golgi complex subunit [Rhizophagus irregularis
DAOM 181602=DAOM 197198]
Length = 854
Score = 76.6 bits (187), Expect(3) = 1e-20
Identities = 59/142 (41%), Positives = 63/142 (44%), Gaps = 31/142 (21%)
Frame = +1
Query: 142 LSDLGPGTP*RTVLPTQFSVKDNLKQITYSRLN----------RXXXXXXXXXXXXXXTS 291
LSDLGPG+P RT PT SVKDNLKQ YSRL+ TS
Sbjct: 47 LSDLGPGSPQRTASPTPSSVKDNLKQSPYSRLSTSPLPKSRSTTNLLAAEFQADEAAATS 106
Query: 292 TPDASLGIPH---------------------QNGGCL*KFLTVVTMYREACSKFWNKLIL 408
TPDASLGIP FLTVVTMYREACSKF ++
Sbjct: 107 TPDASLGIPQPIETTQQFFDWFARMEADMEKDQEDVYRNFLTVVTMYREACSKFLEQIDT 166
Query: 409 Q*NYLMI*IVIFKLVEEGTKAL 474
FK VEE TKAL
Sbjct: 167 TVKLFNDLDSNFKFVEERTKAL 188
Score = 49.3 bits (116), Expect(3) = 1e-20
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 21 MATTISQFKGITLEEWDAKAKLTEL*NYEIL 113
MATTISQ+KGITLEEW+AK KLTEL +L
Sbjct: 1 MATTISQYKGITLEEWEAKTKLTELQRQSVL 31
Score = 21.2 bits (43), Expect(3) = 1e-20
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 92 IIKLRDTCTELPPEE 136
+++L+D C ELP E
Sbjct: 30 VLELQDACAELPLPE 44
>gb|EXX74982.1| Cog3p [Rhizophagus irregularis DAOM 197198w]
Length = 816
Score = 76.6 bits (187), Expect(3) = 1e-20
Identities = 59/142 (41%), Positives = 63/142 (44%), Gaps = 31/142 (21%)
Frame = +1
Query: 142 LSDLGPGTP*RTVLPTQFSVKDNLKQITYSRLN----------RXXXXXXXXXXXXXXTS 291
LSDLGPG+P RT PT SVKDNLKQ YSRL+ TS
Sbjct: 47 LSDLGPGSPQRTASPTPSSVKDNLKQSPYSRLSTSPLPKSRSTTNLLAAEFQADEAAATS 106
Query: 292 TPDASLGIPH---------------------QNGGCL*KFLTVVTMYREACSKFWNKLIL 408
TPDASLGIP FLTVVTMYREACSKF ++
Sbjct: 107 TPDASLGIPQPIETTQQFFDWFARMEADMEKDQEDVYRNFLTVVTMYREACSKFLEQIDT 166
Query: 409 Q*NYLMI*IVIFKLVEEGTKAL 474
FK VEE TKAL
Sbjct: 167 TVKLFNDLDSNFKFVEERTKAL 188
Score = 49.3 bits (116), Expect(3) = 1e-20
Identities = 23/31 (74%), Positives = 26/31 (83%)
Frame = +3
Query: 21 MATTISQFKGITLEEWDAKAKLTEL*NYEIL 113
MATTISQ+KGITLEEW+AK KLTEL +L
Sbjct: 1 MATTISQYKGITLEEWEAKTKLTELQRQSVL 31
Score = 21.2 bits (43), Expect(3) = 1e-20
Identities = 7/15 (46%), Positives = 11/15 (73%)
Frame = +2
Query: 92 IIKLRDTCTELPPEE 136
+++L+D C ELP E
Sbjct: 30 VLELQDACAELPLPE 44