BLASTX nr result

ID: Ophiopogon25_contig00051438 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00051438
         (433 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC68981.1| hypothetical protein RhiirA1_533803 [Rhizophagus ...    80   8e-16

>gb|PKC68981.1| hypothetical protein RhiirA1_533803 [Rhizophagus irregularis]
          Length = 213

 Score = 80.5 bits (197), Expect = 8e-16
 Identities = 60/110 (54%), Positives = 66/110 (60%), Gaps = 3/110 (2%)
 Frame = +2

Query: 17  SSLSRIFNNFGLVVADPINDAPNEFSSLSGVLISKRLLALWGDSLPFSLRALFMLIVDSG 196
           S+  R FNNFGLVVADPINDAPNE   +   L       LW DSLPFSLRALF   VD  
Sbjct: 7   SNFCRRFNNFGLVVADPINDAPNE---IFFALWRFDFQELWDDSLPFSLRALFN--VD-- 59

Query: 197 V*IKDTEA-SHTVLAGI--VVPSTSTSIHLGSCSDVADIAVSPVRSFWNI 337
              KDTEA  H +L     ++P  S SI     SDVADI VS VRSFW +
Sbjct: 60  ---KDTEAIPHRLLESSYHLLPVPSISI---PRSDVADITVSLVRSFWKL 103


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