BLASTX nr result
ID: Ophiopogon25_contig00051279
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00051279
(737 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|PKY38479.1| RdRP-domain-containing protein [Rhizophagus irreg... 100 8e-41
dbj|GBC17974.1| RNA-dependent RNA polymerase [Rhizophagus irregu... 100 2e-40
gb|PKC65618.1| RdRP-domain-containing protein [Rhizophagus irreg... 100 2e-40
gb|PKK77508.1| RdRP-domain-containing protein [Rhizophagus irreg... 100 2e-40
gb|PKC09716.1| RdRP-domain-containing protein [Rhizophagus irreg... 100 2e-40
gb|POG67667.1| putative RNA-directed RNA polymerase [Rhizophagus... 93 4e-38
gb|EXX59583.1| hypothetical protein RirG_187760 [Rhizophagus irr... 75 6e-29
dbj|GBC24019.1| RNA-directed RNA polymerase [Rhizophagus irregul... 75 6e-29
gb|POG74151.1| hypothetical protein GLOIN_2v1578121 [Rhizophagus... 75 6e-29
gb|PKC05364.1| RdRP-domain-containing protein [Rhizophagus irreg... 75 6e-29
gb|PKY44466.1| RdRP-domain-containing protein [Rhizophagus irreg... 74 1e-28
gb|PKK66115.1| RdRP-domain-containing protein [Rhizophagus irreg... 75 6e-27
gb|PKC61472.1| RdRP-domain-containing protein, partial [Rhizopha... 73 1e-22
gb|PKK69173.1| RdRP-domain-containing protein [Rhizophagus irreg... 71 5e-22
gb|EXX54681.1| hypothetical protein RirG_232240 [Rhizophagus irr... 62 1e-20
gb|PKY42676.1| RdRP-domain-containing protein [Rhizophagus irreg... 62 1e-20
gb|PKY19633.1| RdRP-domain-containing protein [Rhizophagus irreg... 62 1e-20
gb|PKK63861.1| RdRP-domain-containing protein [Rhizophagus irreg... 62 1e-20
gb|PKC01591.1| RdRP-domain-containing protein [Rhizophagus irreg... 62 1e-20
gb|POG62721.1| RNA dependent RNA polymerase [Rhizophagus irregul... 62 1e-20
>gb|PKY38479.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 572
Score = 100 bits (249), Expect(3) = 8e-41
Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Frame = +1
Query: 130 DERLIPQKSYEPMNYQAQKPKCNDGI-YQNI--FRELYLF*-QT*YDRERSFGKGGFIRS 297
DERLIP K YEPMNY AQKP+ + + +NI F Y+F + K F
Sbjct: 165 DERLIPPKMYEPMNYTAQKPRMVENVTMENIKSFFVKYIFSDKLGMIANAHLAKADFFE- 223
Query: 298 LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ LHGQC+R+AQ HS F K PPEFPPEL AS+FPDFME+ D++SYESQKVL
Sbjct: 224 VGALHGQCKRLAQLHSDAVDFPKTGRPPEFPPELRASKFPDFMEKADRQSYESQKVL 280
Score = 62.0 bits (149), Expect(3) = 8e-41
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D+RL+V+ Y+EFLDDAR GL+ QFGIMTEIEV S YIVN ITKVD
Sbjct: 305 DERLYVEGYDEFLDDARKLKREYDANIRGLMNQFGIMTEIEVTSGYIVNTITKVD 359
Score = 54.3 bits (129), Expect(3) = 8e-41
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VME +I IKRHY+KLFEQEF S +I+PE RSRMESK
Sbjct: 370 VMEALIPIKRHYKKLFEQEFYNGGSNIITPEIRSRMESK 408
>dbj|GBC17974.1| RNA-dependent RNA polymerase [Rhizophagus irregularis DAOM 181602]
Length = 1329
Score = 100 bits (249), Expect(3) = 2e-40
Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Frame = +1
Query: 130 DERLIPQKSYEPMNYQAQKPKCNDGI-YQNI--FRELYLF*-QT*YDRERSFGKGGFIRS 297
DERLIP K YEPMNY AQKP+ + + +NI F Y+F + K F
Sbjct: 922 DERLIPPKMYEPMNYTAQKPRMVENVTMENIKSFFVKYIFSDKLGMIANAHLAKADFFE- 980
Query: 298 LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ LHGQC+R+AQ HS F K PPEFPPEL AS+FPDFME+ D++SYESQKVL
Sbjct: 981 VGALHGQCKRLAQLHSDAVDFPKTGRPPEFPPELRASKFPDFMEKADRQSYESQKVL 1037
Score = 62.0 bits (149), Expect(3) = 2e-40
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D+RL+V+ Y+EFLDDAR GL+ QFGIMTEIEV S YIVN ITKVD
Sbjct: 1062 DERLYVEGYDEFLDDARKLKREYDANIRGLMNQFGIMTEIEVTSGYIVNTITKVD 1116
Score = 53.1 bits (126), Expect(3) = 2e-40
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VME +I IKRHY+KLFEQEF S +I+P+ RSRMESK
Sbjct: 1127 VMEALIPIKRHYKKLFEQEFYNGGSNIITPDIRSRMESK 1165
>gb|PKC65618.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 827
Score = 100 bits (249), Expect(3) = 2e-40
Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Frame = +1
Query: 130 DERLIPQKSYEPMNYQAQKPKCNDGI-YQNI--FRELYLF*-QT*YDRERSFGKGGFIRS 297
DERLIP K YEPMNY AQKP+ + + +NI F Y+F + K F
Sbjct: 420 DERLIPPKMYEPMNYTAQKPRMVENVTMENIKSFFVKYIFSDKLGMIANAHLAKADFFE- 478
Query: 298 LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ LHGQC+R+AQ HS F K PPEFPPEL AS+FPDFME+ D++SYESQKVL
Sbjct: 479 VGALHGQCKRLAQLHSDAVDFPKTGRPPEFPPELRASKFPDFMEKADRQSYESQKVL 535
Score = 62.0 bits (149), Expect(3) = 2e-40
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D+RL+V+ Y+EFLDDAR GL+ QFGIMTEIEV S YIVN ITKVD
Sbjct: 560 DERLYVEGYDEFLDDARKLKREYDANIRGLMNQFGIMTEIEVTSGYIVNTITKVD 614
Score = 53.1 bits (126), Expect(3) = 2e-40
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VME +I IKRHY+KLFEQEF S +I+P+ RSRMESK
Sbjct: 625 VMEALIPIKRHYKKLFEQEFYNGGSNIITPDIRSRMESK 663
>gb|PKK77508.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 651
Score = 100 bits (249), Expect(3) = 2e-40
Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Frame = +1
Query: 130 DERLIPQKSYEPMNYQAQKPKCNDGI-YQNI--FRELYLF*-QT*YDRERSFGKGGFIRS 297
DERLIP K YEPMNY AQKP+ + + +NI F Y+F + K F
Sbjct: 244 DERLIPPKMYEPMNYTAQKPRMVENVTMENIKSFFVKYIFSDKLGMIANAHLAKADFFE- 302
Query: 298 LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ LHGQC+R+AQ HS F K PPEFPPEL AS+FPDFME+ D++SYESQKVL
Sbjct: 303 VGALHGQCKRLAQLHSDAVDFPKTGRPPEFPPELRASKFPDFMEKADRQSYESQKVL 359
Score = 62.0 bits (149), Expect(3) = 2e-40
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D+RL+V+ Y+EFLDDAR GL+ QFGIMTEIEV S YIVN ITKVD
Sbjct: 384 DERLYVEGYDEFLDDARKLKREYDANIRGLMNQFGIMTEIEVTSGYIVNTITKVD 438
Score = 53.1 bits (126), Expect(3) = 2e-40
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VME +I IKRHY+KLFEQEF S +I+P+ RSRMESK
Sbjct: 449 VMEALIPIKRHYKKLFEQEFYNGGSNIITPDIRSRMESK 487
>gb|PKC09716.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 651
Score = 100 bits (249), Expect(3) = 2e-40
Identities = 61/117 (52%), Positives = 74/117 (63%), Gaps = 5/117 (4%)
Frame = +1
Query: 130 DERLIPQKSYEPMNYQAQKPKCNDGI-YQNI--FRELYLF*-QT*YDRERSFGKGGFIRS 297
DERLIP K YEPMNY AQKP+ + + +NI F Y+F + K F
Sbjct: 244 DERLIPPKMYEPMNYTAQKPRMVENVTMENIKSFFVKYIFSDKLGMIANAHLAKADFFE- 302
Query: 298 LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ LHGQC+R+AQ HS F K PPEFPPEL AS+FPDFME+ D++SYESQKVL
Sbjct: 303 VGALHGQCKRLAQLHSDAVDFPKTGRPPEFPPELRASKFPDFMEKADRQSYESQKVL 359
Score = 62.0 bits (149), Expect(3) = 2e-40
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D+RL+V+ Y+EFLDDAR GL+ QFGIMTEIEV S YIVN ITKVD
Sbjct: 384 DERLYVEGYDEFLDDARKLKREYDANIRGLMNQFGIMTEIEVTSGYIVNTITKVD 438
Score = 53.1 bits (126), Expect(3) = 2e-40
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VME +I IKRHY+KLFEQEF S +I+P+ RSRMESK
Sbjct: 449 VMEALIPIKRHYKKLFEQEFYNGGSNIITPDIRSRMESK 487
>gb|POG67667.1| putative RNA-directed RNA polymerase [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 807
Score = 92.8 bits (229), Expect(3) = 4e-38
Identities = 58/115 (50%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Frame = +1
Query: 136 RLIPQKSYEPMNYQAQKPKCNDGI-YQNI--FRELYLF*-QT*YDRERSFGKGGFIRSLP 303
RLIP K+YEPMN AQKP+ + + +NI F Y+F + K F +
Sbjct: 449 RLIPIKAYEPMNNTAQKPRMVENVTMENIKSFFVKYIFSDKLGMIANAHLAKADFFE-VG 507
Query: 304 LLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
LHGQC+R+AQ HS F K PPEFPPEL AS+FPDFME+ D++SYESQKVL
Sbjct: 508 ALHGQCKRLAQLHSDAVDFPKTGRPPEFPPELRASKFPDFMEKADRQSYESQKVL 562
Score = 62.0 bits (149), Expect(3) = 4e-38
Identities = 34/55 (61%), Positives = 39/55 (70%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D+RL+V+ Y+EFLDDAR GL+ QFGIMTEIEV S YIVN ITKVD
Sbjct: 587 DERLYVEGYDEFLDDARKLKREYDANIRGLMNQFGIMTEIEVTSGYIVNTITKVD 641
Score = 53.1 bits (126), Expect(3) = 4e-38
Identities = 26/39 (66%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VME +I IKRHY+KLFEQEF S +I+P+ RSRMESK
Sbjct: 652 VMEALIPIKRHYKKLFEQEFYNGGSNIITPDIRSRMESK 690
>gb|EXX59583.1| hypothetical protein RirG_187760 [Rhizophagus irregularis DAOM
197198w]
Length = 1283
Score = 74.7 bits (182), Expect(3) = 6e-29
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQK-SYEPMNYQAQKPKCNDGIYQNIFRELYLF*QT*YDRERSFGKGGFIRS--- 297
DERLIPQK + PMNY+AQ P+ + + + ++ ++ D ++
Sbjct: 887 DERLIPQKKNLGPMNYEAQNPEMVENVTMDHVKKFFVNYML-SDEIDMIANAHMAKADTS 945
Query: 298 -LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS + K P FPPEL A +FPDFME TDK +Y+S+KVL
Sbjct: 946 DVGAFHGQCIRLAQLHSEAVDYPKTGRPAIFPPELRAHKFPDFMEITDKATYQSEKVL 1003
Score = 51.6 bits (122), Expect(3) = 6e-29
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
+M+ VI IKRHYRKLFE EF E + V+SP AR+RME+K
Sbjct: 1089 IMDAVIPIKRHYRKLFEGEFYGEGTRVVSPGARNRMEAK 1127
Score = 50.4 bits (119), Expect(3) = 6e-29
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D RL+V+ Y+ +L+DAR GL+ QFGI TE EV S YIVN IT VD
Sbjct: 1024 DNRLYVEGYQAYLEDARILKSAYDADIRGLMNQFGIATEFEVTSGYIVNTITNVD 1078
>dbj|GBC24019.1| RNA-directed RNA polymerase [Rhizophagus irregularis DAOM 181602]
Length = 1245
Score = 74.7 bits (182), Expect(3) = 6e-29
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQK-SYEPMNYQAQKPKCNDGIYQNIFRELYLF*QT*YDRERSFGKGGFIRS--- 297
DERLIPQK + PMNY+AQ P+ + + + ++ ++ D ++
Sbjct: 887 DERLIPQKKNLGPMNYEAQNPEMVENVTMDHVKKFFVNYML-SDEIDMIANAHMAKADTS 945
Query: 298 -LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS + K P FPPEL A +FPDFME TDK +Y+S+KVL
Sbjct: 946 DVGAFHGQCIRLAQLHSEAVDYPKTGRPAIFPPELRAHKFPDFMEITDKATYQSEKVL 1003
Score = 51.6 bits (122), Expect(3) = 6e-29
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
+M+ VI IKRHYRKLFE EF E + V+SP AR+RME+K
Sbjct: 1089 IMDAVIPIKRHYRKLFEGEFYGEGTRVVSPGARNRMEAK 1127
Score = 50.4 bits (119), Expect(3) = 6e-29
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D RL+V+ Y+ +L+DAR GL+ QFGI TE EV S YIVN IT VD
Sbjct: 1024 DNRLYVEGYQAYLEDARILKSAYDADIRGLMNQFGIATEFEVTSGYIVNTITNVD 1078
>gb|POG74151.1| hypothetical protein GLOIN_2v1578121 [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 1222
Score = 74.7 bits (182), Expect(3) = 6e-29
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQK-SYEPMNYQAQKPKCNDGIYQNIFRELYLF*QT*YDRERSFGKGGFIRS--- 297
DERLIPQK + PMNY+AQ P+ + + + ++ ++ D ++
Sbjct: 826 DERLIPQKKNLGPMNYEAQNPEMVENVTMDHVKKFFVNYML-SDEIDMIANAHMAKADTS 884
Query: 298 -LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS + K P FPPEL A +FPDFME TDK +Y+S+KVL
Sbjct: 885 DVGAFHGQCIRLAQLHSEAVDYPKTGRPAIFPPELRAHKFPDFMEITDKATYQSEKVL 942
Score = 51.6 bits (122), Expect(3) = 6e-29
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
+M+ VI IKRHYRKLFE EF E + V+SP AR+RME+K
Sbjct: 1028 IMDAVIPIKRHYRKLFEGEFYGEGTRVVSPGARNRMEAK 1066
Score = 50.4 bits (119), Expect(3) = 6e-29
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D RL+V+ Y+ +L+DAR GL+ QFGI TE EV S YIVN IT VD
Sbjct: 963 DNRLYVEGYQAYLEDARILKSAYDADIRGLMNQFGIATEFEVTSGYIVNTITNVD 1017
>gb|PKC05364.1| RdRP-domain-containing protein [Rhizophagus irregularis]
gb|PKC64821.1| RdRP-domain-containing protein [Rhizophagus irregularis]
gb|PKY23293.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 949
Score = 74.7 bits (182), Expect(3) = 6e-29
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQK-SYEPMNYQAQKPKCNDGIYQNIFRELYLF*QT*YDRERSFGKGGFIRS--- 297
DERLIPQK + PMNY+AQ P+ + + + ++ ++ D ++
Sbjct: 553 DERLIPQKKNLGPMNYEAQNPEMVENVTMDHVKKFFVNYML-SDEIDMIANAHMAKADTS 611
Query: 298 -LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS + K P FPPEL A +FPDFME TDK +Y+S+KVL
Sbjct: 612 DVGAFHGQCIRLAQLHSEAVDYPKTGRPAIFPPELRAHKFPDFMEITDKATYQSEKVL 669
Score = 51.6 bits (122), Expect(3) = 6e-29
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
+M+ VI IKRHYRKLFE EF E + V+SP AR+RME+K
Sbjct: 755 IMDAVIPIKRHYRKLFEGEFYGEGTRVVSPGARNRMEAK 793
Score = 50.4 bits (119), Expect(3) = 6e-29
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D RL+V+ Y+ +L+DAR GL+ QFGI TE EV S YIVN IT VD
Sbjct: 690 DNRLYVEGYQAYLEDARILKSAYDADIRGLMNQFGIATEFEVTSGYIVNTITNVD 744
>gb|PKY44466.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 945
Score = 73.6 bits (179), Expect(3) = 1e-28
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIP-QKSYEPMNYQAQKPKCNDGIYQNIFRELYLF*QT*YDRERSFGKGGFIRS--- 297
DERLIP +K+ PMNY+AQ+P+ + + + ++ ++ D ++
Sbjct: 549 DERLIPPKKNLGPMNYEAQEPEMVENVTMDHVKKFFVNYML-SDEIDMIANAHMAKADTS 607
Query: 298 -LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS + K P FPPEL A +FPDFME TDK +Y+S+KVL
Sbjct: 608 DVGAFHGQCIRLAQLHSEAVDYPKTGRPAIFPPELRAHKFPDFMEITDKATYQSEKVL 665
Score = 51.6 bits (122), Expect(3) = 1e-28
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
+M+ VI IKRHYRKLFE EF E + V+SP AR+RME+K
Sbjct: 751 IMDAVIPIKRHYRKLFEGEFYGEGTRVVSPGARNRMEAK 789
Score = 50.4 bits (119), Expect(3) = 1e-28
Identities = 28/55 (50%), Positives = 34/55 (61%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D RL+V+ Y+ +L+DAR GL+ QFGI TE EV S YIVN IT VD
Sbjct: 686 DNRLYVEGYQAYLEDARILKSAYDADIRGLMNQFGIATEFEVTSGYIVNTITNVD 740
>gb|PKK66115.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 1176
Score = 74.7 bits (182), Expect(3) = 6e-27
Identities = 47/118 (39%), Positives = 66/118 (55%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQK-SYEPMNYQAQKPKCNDGIYQNIFRELYLF*QT*YDRERSFGKGGFIRS--- 297
DERLIPQK + PMNY+AQ P+ + + + ++ ++ D ++
Sbjct: 885 DERLIPQKKNLGPMNYEAQNPEMVENVTMDHVKKFFVNYML-SDEIDMIANAHMAKADTS 943
Query: 298 -LPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS + K P FPPEL A +FPDFME TDK +Y+S+KVL
Sbjct: 944 DVGAFHGQCIRLAQLHSEAVDYPKTGRPAIFPPELRAHKFPDFMEITDKATYQSEKVL 1001
Score = 51.6 bits (122), Expect(3) = 6e-27
Identities = 25/39 (64%), Positives = 31/39 (79%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
+M+ VI IKRHYRKLFE EF E + V+SP AR+RME+K
Sbjct: 1069 IMDAVIPIKRHYRKLFEGEFYGEGTRVVSPGARNRMEAK 1107
Score = 43.5 bits (101), Expect(3) = 6e-27
Identities = 23/44 (52%), Positives = 28/44 (63%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDARGLIIQFGIMTEIEVISEYIVNIITKVD 599
D RL+V+ Y+ +L+D FGI TE EV S YIVN IT VD
Sbjct: 1022 DNRLYVEGYQAYLED-------FGIATEFEVTSGYIVNTITNVD 1058
>gb|PKC61472.1| RdRP-domain-containing protein, partial [Rhizophagus irregularis]
Length = 460
Score = 73.2 bits (178), Expect(2) = 1e-22
Identities = 40/75 (53%), Positives = 51/75 (68%), Gaps = 9/75 (12%)
Frame = +1
Query: 307 LHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVLLI---- 471
L+G+C R+AQ HS +LK PP FPPEL A EFPDFME++DKKSY+S KVL I
Sbjct: 214 LNGKCIRLAQLHSGAVDYLKTGTPPVFPPELRADEFPDFMEKSDKKSYKSNKVLGILYRS 273
Query: 472 ----KDYLLIDMKNF 504
++Y +D+KNF
Sbjct: 274 INVSEEYTPLDVKNF 288
Score = 62.0 bits (149), Expect(2) = 1e-22
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = +2
Query: 182 KNQNVTMEYIRIFFVNYIFSDKLDMIANAHLAKADSFEV 298
KNQ+VT+E I+ FFVNY+FSDKL++IANAHLAKADS +V
Sbjct: 173 KNQSVTIEDIKKFFVNYLFSDKLELIANAHLAKADSSDV 211
Score = 54.3 bits (129), Expect(2) = 2e-09
Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D+RL+ D +EEFLDDAR GL+ QFGI EIEV S YIVN IT +D
Sbjct: 289 DKRLYADGFEEFLDDARKLKREYDANIRGLMNQFGINNEIEVTSGYIVNTITNID 343
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VME +I IKRHY+KLF+QE+ S + SR+ESK
Sbjct: 354 VMEALIPIKRHYKKLFDQEWE-------SNKDHSRVESK 385
>gb|PKK69173.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 474
Score = 71.2 bits (173), Expect(2) = 5e-22
Identities = 39/75 (52%), Positives = 51/75 (68%), Gaps = 9/75 (12%)
Frame = +1
Query: 307 LHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVLLI---- 471
L+G+C R+AQ HS +LK PP FPPEL A EFPDFME++DKKSY+S KVL I
Sbjct: 228 LNGKCIRLAQLHSGAVDYLKTGTPPVFPPELRADEFPDFMEKSDKKSYKSNKVLGILYRS 287
Query: 472 ----KDYLLIDMKNF 504
++Y +++KNF
Sbjct: 288 INVSEEYTPLNIKNF 302
Score = 62.0 bits (149), Expect(2) = 5e-22
Identities = 29/39 (74%), Positives = 36/39 (92%)
Frame = +2
Query: 182 KNQNVTMEYIRIFFVNYIFSDKLDMIANAHLAKADSFEV 298
KNQ+VT+E I+ FFVNY+FSDKL++IANAHLAKADS +V
Sbjct: 187 KNQSVTIEDIKKFFVNYLFSDKLELIANAHLAKADSSDV 225
Score = 54.3 bits (129), Expect(2) = 2e-09
Identities = 30/55 (54%), Positives = 35/55 (63%), Gaps = 11/55 (20%)
Frame = +3
Query: 468 DQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
D+RL+ D +EEFLDDAR GL+ QFGI EIEV S YIVN IT +D
Sbjct: 303 DKRLYADGFEEFLDDARKLKREYDANIRGLMNQFGINNEIEVTSGYIVNTITNID 357
Score = 36.6 bits (83), Expect(2) = 2e-09
Identities = 20/39 (51%), Positives = 26/39 (66%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VME +I IKRHY+KLF+QE+ S + SR+ESK
Sbjct: 368 VMEALIPIKRHYKKLFDQEWE-------SNKDHSRVESK 399
>gb|EXX54681.1| hypothetical protein RirG_232240 [Rhizophagus irregularis DAOM
197198w]
dbj|GBC10886.1| RNA-dependent RNA polymerase [Rhizophagus irregularis DAOM 181602]
Length = 1186
Score = 62.4 bits (150), Expect(3) = 1e-20
Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQKS-YEPMNYQAQKPKCNDGI----YQNIFRELYLF*QT*YDRERSFGKGGFIR 294
DERLIP+K EPM Y+AQ+P + + Q+ F L Q K
Sbjct: 854 DERLIPKKKRIEPMAYEAQRPDYIENVTIEDVQSFFVNYILSDQLGIIANSHLAKADHFE 913
Query: 295 SLPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS F K +P L A+ FPDFME+ DK +Y S+KVL
Sbjct: 914 T-GAFHGQCIRLAQLHSEAVDFPKTGKPAILSSVLRANTFPDFMEKHDKPTYISEKVL 970
Score = 47.0 bits (110), Expect(3) = 1e-20
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VM+ ISI+RHYRKLFE+EF + + +ISP A +RM +K
Sbjct: 1056 VMDAFISIRRHYRKLFEEEFYGKGTNIISPVAHNRMRAK 1094
Score = 38.9 bits (89), Expect(3) = 1e-20
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Frame = +3
Query: 465 VDQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
+D RL V Y+ ++++AR GL+ Q+G+ TE EV S YIVN I ++
Sbjct: 990 LDDRLHVQGYKTYVEEARKIKSTYDADIKGLMNQYGVKTEFEVTSGYIVNTIINLE 1045
>gb|PKY42676.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 889
Score = 62.4 bits (150), Expect(3) = 1e-20
Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQKS-YEPMNYQAQKPKCNDGI----YQNIFRELYLF*QT*YDRERSFGKGGFIR 294
DERLIP+K EPM Y+AQ+P + + Q+ F L Q K
Sbjct: 557 DERLIPKKKRIEPMAYEAQRPDYIENVTIEDVQSFFVNYILSDQLGIIANSHLAKADHFE 616
Query: 295 SLPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS F K +P L A+ FPDFME+ DK +Y S+KVL
Sbjct: 617 T-GAFHGQCIRLAQLHSEAVDFPKTGKPAILSSVLRANTFPDFMEKHDKPTYISEKVL 673
Score = 47.0 bits (110), Expect(3) = 1e-20
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VM+ ISI+RHYRKLFE+EF + + +ISP A +RM +K
Sbjct: 759 VMDAFISIRRHYRKLFEEEFYGKGTNIISPVAHNRMRAK 797
Score = 38.9 bits (89), Expect(3) = 1e-20
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Frame = +3
Query: 465 VDQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
+D RL V Y+ ++++AR GL+ Q+G+ TE EV S YIVN I ++
Sbjct: 693 LDDRLHVQGYKTYVEEARKIKSTYDADIKGLMNQYGVKTEFEVTSGYIVNTIINLE 748
>gb|PKY19633.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 889
Score = 62.4 bits (150), Expect(3) = 1e-20
Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQKS-YEPMNYQAQKPKCNDGI----YQNIFRELYLF*QT*YDRERSFGKGGFIR 294
DERLIP+K EPM Y+AQ+P + + Q+ F L Q K
Sbjct: 557 DERLIPKKKRIEPMAYEAQRPDYIENVTIEDVQSFFVNYILSDQLGIIANSHLAKADHFE 616
Query: 295 SLPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS F K +P L A+ FPDFME+ DK +Y S+KVL
Sbjct: 617 T-GAFHGQCIRLAQLHSEAVDFPKTGKPAILSSVLRANTFPDFMEKHDKPTYISEKVL 673
Score = 47.0 bits (110), Expect(3) = 1e-20
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VM+ ISI+RHYRKLFE+EF + + +ISP A +RM +K
Sbjct: 759 VMDAFISIRRHYRKLFEEEFYGKGTNIISPVAHNRMRAK 797
Score = 38.9 bits (89), Expect(3) = 1e-20
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Frame = +3
Query: 465 VDQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
+D RL V Y+ ++++AR GL+ Q+G+ TE EV S YIVN I ++
Sbjct: 693 LDDRLHVQGYKTYVEEARKIKRTYDADIKGLMNQYGVKTEFEVTSGYIVNTIINLE 748
>gb|PKK63861.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 889
Score = 62.4 bits (150), Expect(3) = 1e-20
Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQKS-YEPMNYQAQKPKCNDGI----YQNIFRELYLF*QT*YDRERSFGKGGFIR 294
DERLIP+K EPM Y+AQ+P + + Q+ F L Q K
Sbjct: 557 DERLIPKKKRIEPMAYEAQRPDYIENVTIEDVQSFFVNYILSDQLGIIANSHLAKADHFE 616
Query: 295 SLPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS F K +P L A+ FPDFME+ DK +Y S+KVL
Sbjct: 617 T-GAFHGQCIRLAQLHSEAVDFPKTGKPAILSSVLRANTFPDFMEKHDKPTYISEKVL 673
Score = 47.0 bits (110), Expect(3) = 1e-20
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VM+ ISI+RHYRKLFE+EF + + +ISP A +RM +K
Sbjct: 759 VMDAFISIRRHYRKLFEEEFYGKGTNIISPVAHNRMRAK 797
Score = 38.9 bits (89), Expect(3) = 1e-20
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Frame = +3
Query: 465 VDQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
+D RL V Y+ ++++AR GL+ Q+G+ TE EV S YIVN I ++
Sbjct: 693 LDDRLHVQGYKTYVEEARKIKRTYDADIKGLMNQYGVKTEFEVTSGYIVNTIINLE 748
>gb|PKC01591.1| RdRP-domain-containing protein [Rhizophagus irregularis]
Length = 889
Score = 62.4 bits (150), Expect(3) = 1e-20
Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQKS-YEPMNYQAQKPKCNDGI----YQNIFRELYLF*QT*YDRERSFGKGGFIR 294
DERLIP+K EPM Y+AQ+P + + Q+ F L Q K
Sbjct: 557 DERLIPKKKRIEPMAYEAQRPDYIENVTIEDVQSFFVNYILSDQLGIIANSHLAKADHFE 616
Query: 295 SLPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS F K +P L A+ FPDFME+ DK +Y S+KVL
Sbjct: 617 T-GAFHGQCIRLAQLHSEAVDFPKTGKPAILSSVLRANTFPDFMEKHDKPTYISEKVL 673
Score = 47.0 bits (110), Expect(3) = 1e-20
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VM+ ISI+RHYRKLFE+EF + + +ISP A +RM +K
Sbjct: 759 VMDAFISIRRHYRKLFEEEFYGKGTNIISPVAHNRMRAK 797
Score = 38.9 bits (89), Expect(3) = 1e-20
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Frame = +3
Query: 465 VDQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
+D RL V Y+ ++++AR GL+ Q+G+ TE EV S YIVN I ++
Sbjct: 693 LDDRLHVQGYKTYVEEARKIKSTYDADIKGLMNQYGVKTEFEVTSGYIVNTIINLE 748
>gb|POG62721.1| RNA dependent RNA polymerase [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 889
Score = 62.4 bits (150), Expect(3) = 1e-20
Identities = 46/118 (38%), Positives = 59/118 (50%), Gaps = 6/118 (5%)
Frame = +1
Query: 130 DERLIPQKS-YEPMNYQAQKPKCNDGI----YQNIFRELYLF*QT*YDRERSFGKGGFIR 294
DERLIP+K EPM Y+AQ+P + + Q+ F L Q K
Sbjct: 557 DERLIPKKKRIEPMAYEAQRPDYIENVTIEDVQSFFVNYILSDQLGIIANSHLAKADHFE 616
Query: 295 SLPLLHGQCRRIAQFHSMP*IFLKR-EPPEFPPELHASEFPDFMEETDKKSYESQKVL 465
+ HGQC R+AQ HS F K +P L A+ FPDFME+ DK +Y S+KVL
Sbjct: 617 T-GAFHGQCIRLAQLHSEAVDFPKTGKPAILSSVLRANTFPDFMEKHDKPTYISEKVL 673
Score = 47.0 bits (110), Expect(3) = 1e-20
Identities = 22/39 (56%), Positives = 30/39 (76%)
Frame = +2
Query: 620 VMEIVISIKRHYRKLFEQEFSIEDSIVISPEARSRMESK 736
VM+ ISI+RHYRKLFE+EF + + +ISP A +RM +K
Sbjct: 759 VMDAFISIRRHYRKLFEEEFYGKGTNIISPVAHNRMRAK 797
Score = 38.9 bits (89), Expect(3) = 1e-20
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 11/56 (19%)
Frame = +3
Query: 465 VDQRLFVDRYEEFLDDAR-----------GLIIQFGIMTEIEVISEYIVNIITKVD 599
+D RL V Y+ ++++AR GL+ Q+G+ TE EV S YIVN I ++
Sbjct: 693 LDDRLHVQGYKTYVEEARKIKSTYDADIKGLMNQYGVKTEFEVTSGYIVNTIINLE 748