BLASTX nr result

ID: Ophiopogon25_contig00051159 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00051159
         (425 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PRQ15612.1| hypothetical protein RchiOBHm_MTg0498411 (mitocho...    53   3e-06
ref|YP_009049820.1| hypothetical protein (mitochondrion) [Capsic...    52   4e-06

>gb|PRQ15612.1| hypothetical protein RchiOBHm_MTg0498411 (mitochondrion) [Rosa
           chinensis]
          Length = 122

 Score = 53.1 bits (126), Expect = 3e-06
 Identities = 26/41 (63%), Positives = 28/41 (68%)
 Frame = -3

Query: 414 C*ILTYPKALKPNSWWIPGDKVKVLIPASLPRTSRCSSQPT 292
           C I+T+  ALKPN WWIPGDK K L P  LP T RCSS  T
Sbjct: 32  CWIVTHHTALKPNLWWIPGDKAKALDP--LPHTLRCSSPRT 70


>ref|YP_009049820.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG89896.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|AIG90178.1| hypothetical protein (mitochondrion) [Capsicum annuum]
 gb|PHT62422.1| hypothetical protein T459_33727 [Capsicum annuum]
 gb|ATW72821.1| orf102 (mitochondrion) [Solanum commersonii]
 gb|AUS83342.1| hypothetical protein (mitochondrion) [Solanum tuberosum]
 gb|AUS83349.1| hypothetical protein (mitochondrion) [Solanum tuberosum]
 gb|AUS83389.1| hypothetical protein (mitochondrion) [Solanum tuberosum]
 gb|AUS83411.1| hypothetical protein (mitochondrion) [Solanum tuberosum]
 gb|AUS83454.1| hypothetical protein (mitochondrion) [Solanum tuberosum]
          Length = 102

 Score = 52.4 bits (124), Expect = 4e-06
 Identities = 26/41 (63%), Positives = 29/41 (70%)
 Frame = -3

Query: 423 SKLC*ILTYPKALKPNSWWIPGDKVKVLIPASLPRTSRCSS 301
           S+ C I+T+  ALKPN WWIPGDKVK   P  LP T RCSS
Sbjct: 29  SEPCWIVTHHTALKPNLWWIPGDKVKTQHP--LPHTLRCSS 67


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