BLASTX nr result

ID: Ophiopogon25_contig00051079 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00051079
         (482 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY51517.1| DNA/RNA polymerase [Rhizophagus irregularis]           152   1e-39
gb|PKK68782.1| DNA/RNA polymerase [Rhizophagus irregularis]           150   4e-39
gb|PKC14919.1| DNA/RNA polymerase [Rhizophagus irregularis] >gi|...   150   6e-39
gb|EXX50803.1| hypothetical protein RirG_267380 [Rhizophagus irr...   150   6e-39

>gb|PKY51517.1| DNA/RNA polymerase [Rhizophagus irregularis]
          Length = 784

 Score =  152 bits (383), Expect = 1e-39
 Identities = 73/89 (82%), Positives = 75/89 (84%), Gaps = 1/89 (1%)
 Frame = -1

Query: 482 AQVNDNKTRVKDTVVIQENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKIN-XXXX 306
           AQVND+KTRVK+T VIQENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKIN     
Sbjct: 696 AQVNDDKTRVKNTDVIQENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKINGVRGR 755

Query: 305 XXXXXXXXGSPHPTVTLHNFFPSSHLGIH 219
                   GSPHPTVTLHNFFPSSHLGIH
Sbjct: 756 RGRGRGRRGSPHPTVTLHNFFPSSHLGIH 784


>gb|PKK68782.1| DNA/RNA polymerase [Rhizophagus irregularis]
          Length = 782

 Score =  150 bits (379), Expect = 4e-39
 Identities = 72/88 (81%), Positives = 74/88 (84%)
 Frame = -1

Query: 482 AQVNDNKTRVKDTVVIQENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKINXXXXX 303
           AQVND+KTRVK+T VI ENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKIN     
Sbjct: 696 AQVNDDKTRVKNTDVIHENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKIN-GVRG 754

Query: 302 XXXXXXXGSPHPTVTLHNFFPSSHLGIH 219
                  GSPHPTVTLHNFFPSSHLGIH
Sbjct: 755 RRGRGRRGSPHPTVTLHNFFPSSHLGIH 782


>gb|PKC14919.1| DNA/RNA polymerase [Rhizophagus irregularis]
 gb|PKC60569.1| DNA/RNA polymerase [Rhizophagus irregularis]
 gb|PKY20879.1| DNA/RNA polymerase [Rhizophagus irregularis]
          Length = 784

 Score =  150 bits (378), Expect = 6e-39
 Identities = 72/89 (80%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
 Frame = -1

Query: 482 AQVNDNKTRVKDTVVIQENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKIN-XXXX 306
           AQVND+KTRVK+T VI ENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKIN     
Sbjct: 696 AQVNDDKTRVKNTDVIHENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKINGVRGR 755

Query: 305 XXXXXXXXGSPHPTVTLHNFFPSSHLGIH 219
                   GSPHPTVTLHNFFPSSHLGIH
Sbjct: 756 RGRGRGRRGSPHPTVTLHNFFPSSHLGIH 784


>gb|EXX50803.1| hypothetical protein RirG_267380 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC35427.1| DNA polymerase kappa [Rhizophagus irregularis DAOM 181602]
 gb|POG60327.1| hypothetical protein GLOIN_2v1714532 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 784

 Score =  150 bits (378), Expect = 6e-39
 Identities = 72/89 (80%), Positives = 74/89 (83%), Gaps = 1/89 (1%)
 Frame = -1

Query: 482 AQVNDNKTRVKDTVVIQENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKIN-XXXX 306
           AQVND+KTRVK+T VI ENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKIN     
Sbjct: 696 AQVNDDKTRVKNTDVIHENWNCPICNRHFDNPTRMRVNSHFEACRAPRFPNTKINGVRGR 755

Query: 305 XXXXXXXXGSPHPTVTLHNFFPSSHLGIH 219
                   GSPHPTVTLHNFFPSSHLGIH
Sbjct: 756 RGRGRGRRGSPHPTVTLHNFFPSSHLGIH 784


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