BLASTX nr result

ID: Ophiopogon25_contig00050923 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00050923
         (507 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC39244.1| Tis13_94715: PROVISIONAL [Rhizophagus irregulari...    54   3e-06

>dbj|GBC39244.1| Tis13_94715: PROVISIONAL [Rhizophagus irregularis DAOM 181602]
          Length = 135

 Score = 54.3 bits (129), Expect = 3e-06
 Identities = 25/34 (73%), Positives = 29/34 (85%)
 Frame = +3

Query: 360 FFYIGNVFGVRIHMESLFSVISKDSRGSFPTSAD 461
           + +IGNV GVRIH++SLFSV SKD RGSFPTS D
Sbjct: 99  YLHIGNVLGVRIHVKSLFSVNSKDLRGSFPTSTD 132


Top