BLASTX nr result

ID: Ophiopogon25_contig00050476 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00050476
         (504 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX73421.1| hypothetical protein RirG_060470 [Rhizophagus irr...   238   2e-77
dbj|GBC35392.1| Exosome complex exonuclease RRP6 [Rhizophagus ir...   242   3e-72
dbj|GBC35391.1| exosome complex exonuclease rrp6 [Rhizophagus ir...   238   2e-70
gb|PKK69707.1| hypothetical protein RhiirC2_747871, partial [Rhi...   236   6e-70
gb|EXX79929.1| hypothetical protein RirG_000910 [Rhizophagus irr...   117   6e-31

>gb|EXX73421.1| hypothetical protein RirG_060470 [Rhizophagus irregularis DAOM
           197198w]
          Length = 197

 Score =  238 bits (606), Expect = 2e-77
 Identities = 130/168 (77%), Positives = 130/168 (77%), Gaps = 1/168 (0%)
 Frame = -2

Query: 503 KVPKKRRMNDMDEEDGVEQAEPVMTESSSSRNDEHTTTITHNNKAKQV-QTSQGSAPXXX 327
           K  KKRRMNDMDEEDGVEQAEPVMTESS  RNDEHTTTITHNNKAKQV QTSQGSAP   
Sbjct: 31  KSSKKRRMNDMDEEDGVEQAEPVMTESS--RNDEHTTTITHNNKAKQVVQTSQGSAPKKP 88

Query: 326 XXXXXXXXXXKSDDISEKAGTNGVEFDTMDHTELPPXXXXXXXXXXXXXXXXXXXSKCAV 147
                     KSDDISEKAGTNGVEFDTMDHTELPP                   SKCAV
Sbjct: 89  RKKNKKAKLMKSDDISEKAGTNGVEFDTMDHTELPPTVTSRLSTSVTSTISVDTSSKCAV 148

Query: 146 KVETKKNTTSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD 3
           KVETKKN TSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD
Sbjct: 149 KVETKKNATSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD 196


>dbj|GBC35392.1| Exosome complex exonuclease RRP6 [Rhizophagus irregularis DAOM
            181602]
          Length = 879

 Score =  242 bits (618), Expect = 3e-72
 Identities = 130/167 (77%), Positives = 130/167 (77%)
 Frame = -2

Query: 503  KVPKKRRMNDMDEEDGVEQAEPVMTESSSSRNDEHTTTITHNNKAKQVQTSQGSAPXXXX 324
            K  KKRRMNDMDEEDGVEQAEPVMTESS  RNDEHTTTITHNNKAKQVQTSQGSAP    
Sbjct: 692  KSSKKRRMNDMDEEDGVEQAEPVMTESS--RNDEHTTTITHNNKAKQVQTSQGSAPKKPR 749

Query: 323  XXXXXXXXXKSDDISEKAGTNGVEFDTMDHTELPPXXXXXXXXXXXXXXXXXXXSKCAVK 144
                     KSDDISEKAGTNGVEFDTMDHTELPP                   SKCAVK
Sbjct: 750  KKNKKAKLMKSDDISEKAGTNGVEFDTMDHTELPPTVTSRLSTSVTSTISVDTSSKCAVK 809

Query: 143  VETKKNTTSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD 3
            VETKKN TSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD
Sbjct: 810  VETKKNATSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD 856


>dbj|GBC35391.1| exosome complex exonuclease rrp6 [Rhizophagus irregularis DAOM
            181602]
          Length = 880

 Score =  238 bits (606), Expect = 2e-70
 Identities = 130/168 (77%), Positives = 130/168 (77%), Gaps = 1/168 (0%)
 Frame = -2

Query: 503  KVPKKRRMNDMDEEDGVEQAEPVMTESSSSRNDEHTTTITHNNKAKQV-QTSQGSAPXXX 327
            K  KKRRMNDMDEEDGVEQAEPVMTESS  RNDEHTTTITHNNKAKQV QTSQGSAP   
Sbjct: 692  KSSKKRRMNDMDEEDGVEQAEPVMTESS--RNDEHTTTITHNNKAKQVVQTSQGSAPKKP 749

Query: 326  XXXXXXXXXXKSDDISEKAGTNGVEFDTMDHTELPPXXXXXXXXXXXXXXXXXXXSKCAV 147
                      KSDDISEKAGTNGVEFDTMDHTELPP                   SKCAV
Sbjct: 750  RKKNKKAKLMKSDDISEKAGTNGVEFDTMDHTELPPTVTSRLSTSVTSTISVDTSSKCAV 809

Query: 146  KVETKKNTTSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD 3
            KVETKKN TSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD
Sbjct: 810  KVETKKNATSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD 857


>gb|PKK69707.1| hypothetical protein RhiirC2_747871, partial [Rhizophagus
            irregularis]
          Length = 857

 Score =  236 bits (601), Expect = 6e-70
 Identities = 129/168 (76%), Positives = 129/168 (76%), Gaps = 1/168 (0%)
 Frame = -2

Query: 503  KVPKKRRMNDMDEEDGVEQAEPVMTESSSSRNDEHTTTITHNNKAKQV-QTSQGSAPXXX 327
            K  K RRMNDMDEEDGVEQAEPVMTESS  RNDEHTTTITHNNKAKQV QTSQGSAP   
Sbjct: 692  KSSKNRRMNDMDEEDGVEQAEPVMTESS--RNDEHTTTITHNNKAKQVVQTSQGSAPKKP 749

Query: 326  XXXXXXXXXXKSDDISEKAGTNGVEFDTMDHTELPPXXXXXXXXXXXXXXXXXXXSKCAV 147
                      KSDDISEKAGTNGVEFDTMDHTELPP                   SKCAV
Sbjct: 750  RKKNKKAKLMKSDDISEKAGTNGVEFDTMDHTELPPTVTSRLSTSVTSTISVDTSSKCAV 809

Query: 146  KVETKKNTTSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD 3
            KVETKKN TSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD
Sbjct: 810  KVETKKNATSIQTPFDPYGQTVIDERLKRSDPRLPSAPSSGNRSMTMD 857


>gb|EXX79929.1| hypothetical protein RirG_000910 [Rhizophagus irregularis DAOM
           197198w]
          Length = 103

 Score =  117 bits (292), Expect = 6e-31
 Identities = 60/80 (75%), Positives = 60/80 (75%)
 Frame = -2

Query: 242 MDHTELPPXXXXXXXXXXXXXXXXXXXSKCAVKVETKKNTTSIQTPFDPYGQTVIDERLK 63
           MDHTELPP                   SKCAVKVETKKN TSIQTPFDPYGQTVIDERLK
Sbjct: 1   MDHTELPPTVTSRLSTSVTSTISVDTSSKCAVKVETKKNATSIQTPFDPYGQTVIDERLK 60

Query: 62  RSDPRLPSAPSSGNRSMTMD 3
           RSDPRLPSAPSSGNRSMTMD
Sbjct: 61  RSDPRLPSAPSSGNRSMTMD 80


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