BLASTX nr result

ID: Ophiopogon25_contig00050462 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00050462
         (398 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ONK72755.1| uncharacterized protein A4U43_C04F22830 [Asparagu...    80   4e-15
gb|ABD63139.1| Reverse transcriptase family protein [Asparagus o...    74   2e-12
gb|ONK80588.1| uncharacterized protein A4U43_C01F19510 [Asparagu...    64   3e-09

>gb|ONK72755.1| uncharacterized protein A4U43_C04F22830 [Asparagus officinalis]
          Length = 378

 Score = 80.5 bits (197), Expect = 4e-15
 Identities = 53/119 (44%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
 Frame = +3

Query: 48  NVVTPFPREEDGCTASLTDADGEKSAFAAEKEVLPGSGTRSVKKFSKNYYHAAGGSAEIP 227
           N+++P   E +     LTD++ E+   AA  E  PG  TRS K + +NY   A  + E P
Sbjct: 29  NMISPSVSENNDHLKPLTDSEEERIVLAAYPEGNPG--TRSGKVYLRNYDQNAQEAEEQP 86

Query: 228 EEVESQPPKQPAEWKKQ--LRYSSALRKDTTEGSSAPPHFNVMVQLANIPACITFYELL 398
           ++     PK+PA+  KQ  LR++  L +D  E +SAP  FNVMVQLANIPA IT YELL
Sbjct: 87  QDPGGSVPKKPADKGKQKELRFNKNLHQDLGE-TSAPYQFNVMVQLANIPARITLYELL 144


>gb|ABD63139.1| Reverse transcriptase family protein [Asparagus officinalis]
          Length = 1181

 Score = 73.6 bits (179), Expect = 2e-12
 Identities = 52/120 (43%), Positives = 69/120 (57%), Gaps = 4/120 (3%)
 Frame = +3

Query: 51  VVTPFPREEDGCTASLTDADGEKSAFAAEKEVLPGS--GTRSVKKFSKNYYHAAGGSAEI 224
           +++P   E D    +LTD++ E+ A AA     PG   GTRS K + K+Y   A    E 
Sbjct: 1   MISPSITENDDHLKTLTDSEEERIALAA----YPGDNPGTRSGKAYLKDYGQNAQEVEEQ 56

Query: 225 PEEVESQPPKQPAEWKKQ--LRYSSALRKDTTEGSSAPPHFNVMVQLANIPACITFYELL 398
           P++     PK+PA+  KQ  LR++  L ++  E SS P  FNVM QLANIPA IT YELL
Sbjct: 57  PQDAGGSVPKKPADKGKQKELRFNRNLHQEHGE-SSNPFQFNVMAQLANIPARITLYELL 115


>gb|ONK80588.1| uncharacterized protein A4U43_C01F19510 [Asparagus officinalis]
          Length = 353

 Score = 63.9 bits (154), Expect = 3e-09
 Identities = 43/118 (36%), Positives = 62/118 (52%)
 Frame = +3

Query: 45  CNVVTPFPREEDGCTASLTDADGEKSAFAAEKEVLPGSGTRSVKKFSKNYYHAAGGSAEI 224
           CN ++  P +E   T SL+ ++ ++ AF  +   +  SGT   K++ K Y        + 
Sbjct: 28  CNAISAVP-DEGVETTSLSSSENKQLAFTMQPAQI--SGTHGEKEYLKKYSKTTATLPKQ 84

Query: 225 PEEVESQPPKQPAEWKKQLRYSSALRKDTTEGSSAPPHFNVMVQLANIPACITFYELL 398
            +EV  Q         K+LRYS ALRKD  + S     F+V+ QLANIPA IT +ELL
Sbjct: 85  GKEVAEQTQV------KELRYSKALRKDAPKSSKDSFRFDVLAQLANIPARITLFELL 136


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