BLASTX nr result
ID: Ophiopogon25_contig00050427
seq
BLASTX 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Ophiopogon25_contig00050427
(424 letters)
Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
149,584,005 sequences; 54,822,741,787 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|POG58804.1| hypothetical protein GLOIN_2v1488326 [Rhizophagus... 86 1e-16
gb|PKC08872.1| TPR-like protein [Rhizophagus irregularis] 86 1e-16
gb|PKC60056.1| TPR-like protein [Rhizophagus irregularis] >gi|13... 86 1e-16
gb|PKK78254.1| TPR-like protein [Rhizophagus irregularis] 86 1e-16
gb|EXX67531.1| hypothetical protein RirG_113470 [Rhizophagus irr... 86 1e-16
gb|PKY55600.1| TPR-like protein, partial [Rhizophagus irregularis] 82 3e-15
emb|CDS14219.1| hypothetical protein LRAMOSA06389 [Lichtheimia r... 58 6e-07
emb|CDH53064.1| signal recognition particle 72 kda [Lichtheimia ... 58 6e-07
ref|XP_018283631.1| hypothetical protein PHYBLDRAFT_184120 [Phyc... 57 1e-06
ref|XP_019631662.1| PREDICTED: signal recognition particle subun... 57 1e-06
gb|OQR75807.1| signal recognition particle 72 kDa protein-like [... 57 1e-06
gb|EYC22890.1| hypothetical protein Y032_0016g3007 [Ancylostoma ... 56 2e-06
gb|ORX88451.1| protein prenylyltransferase [Basidiobolus meristo... 57 2e-06
gb|EDL89886.1| rCG57035, isoform CRA_a [Rattus norvegicus] 54 2e-06
gb|KIH62085.1| SRP72 RNA-binding domain protein [Ancylostoma duo... 56 2e-06
ref|XP_013307598.1| tetratricopeptide repeat protein [Necator am... 56 2e-06
gb|EPB77045.1| SRP72 RNA-binding domain protein [Ancylostoma cey... 56 2e-06
ref|XP_003740064.1| PREDICTED: signal recognition particle subun... 56 2e-06
ref|XP_015807134.1| PREDICTED: signal recognition particle subun... 56 2e-06
pdb|5M73|D Chain D, Structure Of The Human Srp S Domain With Srp... 54 2e-06
>gb|POG58804.1| hypothetical protein GLOIN_2v1488326 [Rhizophagus irregularis DAOM
181602=DAOM 197198]
Length = 599
Score = 85.5 bits (210), Expect = 1e-16
Identities = 45/66 (68%), Positives = 45/66 (68%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKXXXXXXXXXXXXXXXXXXXXXGK 245
LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK GK
Sbjct: 499 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKGGSQGTAVAGGGIGGTGSANIGK 558
Query: 244 SAVSEN 227
SAVSEN
Sbjct: 559 SAVSEN 564
>gb|PKC08872.1| TPR-like protein [Rhizophagus irregularis]
Length = 599
Score = 85.5 bits (210), Expect = 1e-16
Identities = 45/66 (68%), Positives = 45/66 (68%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKXXXXXXXXXXXXXXXXXXXXXGK 245
LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK GK
Sbjct: 499 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKGGSQGTAVAGGGIGGTGSANIGK 558
Query: 244 SAVSEN 227
SAVSEN
Sbjct: 559 SAVSEN 564
>gb|PKC60056.1| TPR-like protein [Rhizophagus irregularis]
gb|PKY24386.1| TPR-like protein [Rhizophagus irregularis]
Length = 604
Score = 85.5 bits (210), Expect = 1e-16
Identities = 45/66 (68%), Positives = 45/66 (68%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKXXXXXXXXXXXXXXXXXXXXXGK 245
LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK GK
Sbjct: 504 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKGGSQGTAVAGGGIGGTGSANIGK 563
Query: 244 SAVSEN 227
SAVSEN
Sbjct: 564 SAVSEN 569
>gb|PKK78254.1| TPR-like protein [Rhizophagus irregularis]
Length = 669
Score = 85.5 bits (210), Expect = 1e-16
Identities = 45/66 (68%), Positives = 45/66 (68%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKXXXXXXXXXXXXXXXXXXXXXGK 245
LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK GK
Sbjct: 569 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKGGSQGTAVAGGGIGGTGSANIGK 628
Query: 244 SAVSEN 227
SAVSEN
Sbjct: 629 SAVSEN 634
>gb|EXX67531.1| hypothetical protein RirG_113470 [Rhizophagus irregularis DAOM
197198w]
dbj|GBC15462.1| Signal recognition particle subunit SRP72 [Rhizophagus irregularis
DAOM 181602]
Length = 669
Score = 85.5 bits (210), Expect = 1e-16
Identities = 45/66 (68%), Positives = 45/66 (68%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKXXXXXXXXXXXXXXXXXXXXXGK 245
LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK GK
Sbjct: 569 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMKGGSQGTAVAGGGIGGTGSANIGK 628
Query: 244 SAVSEN 227
SAVSEN
Sbjct: 629 SAVSEN 634
>gb|PKY55600.1| TPR-like protein, partial [Rhizophagus irregularis]
Length = 527
Score = 81.6 bits (200), Expect = 3e-15
Identities = 37/37 (100%), Positives = 37/37 (100%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK 314
LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK
Sbjct: 467 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK 503
>emb|CDS14219.1| hypothetical protein LRAMOSA06389 [Lichtheimia ramosa]
Length = 664
Score = 57.8 bits (138), Expect = 6e-07
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK 314
LPK YDP PDPERWIPKRERS+++ KGK K+ K
Sbjct: 565 LPKDYDPEKTPDPERWIPKRERSTYRVKGKNKKAATK 601
>emb|CDH53064.1| signal recognition particle 72 kda [Lichtheimia corymbifera
JMRC:FSU:9682]
Length = 666
Score = 57.8 bits (138), Expect = 6e-07
Identities = 24/37 (64%), Positives = 28/37 (75%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK 314
LPK YDP PDPERWIPKRERS+++ KGK K+ K
Sbjct: 565 LPKDYDPEKTPDPERWIPKRERSTYRVKGKNKKAASK 601
>ref|XP_018283631.1| hypothetical protein PHYBLDRAFT_184120 [Phycomyces blakesleeanus
NRRL 1555(-)]
gb|OAD65591.1| hypothetical protein PHYBLDRAFT_184120 [Phycomyces blakesleeanus
NRRL 1555(-)]
Length = 674
Score = 57.0 bits (136), Expect = 1e-06
Identities = 23/37 (62%), Positives = 31/37 (83%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQLMK 314
LPK+ DPS PDPERW+PKRERS+++AKGK K+ ++
Sbjct: 570 LPKNCDPSRTPDPERWLPKRERSTYRAKGKNKKAALR 606
>ref|XP_019631662.1| PREDICTED: signal recognition particle subunit SRP72-like
[Branchiostoma belcheri]
Length = 682
Score = 57.0 bits (136), Expect = 1e-06
Identities = 23/34 (67%), Positives = 29/34 (85%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQ 323
LPK+YDPS+ PDPERW+P R+RS FK + KRKQ+
Sbjct: 570 LPKNYDPSVTPDPERWLPIRDRSYFKGRRKRKQK 603
>gb|OQR75807.1| signal recognition particle 72 kDa protein-like [Tropilaelaps
mercedesae]
Length = 373
Score = 56.6 bits (135), Expect = 1e-06
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQ 323
LPK+YDP++ PDPERW+PK ERS+FK +G+R ++
Sbjct: 280 LPKNYDPNVTPDPERWLPKWERSTFKKRGRRNRE 313
>gb|EYC22890.1| hypothetical protein Y032_0016g3007 [Ancylostoma ceylanicum]
Length = 283
Score = 56.2 bits (134), Expect = 2e-06
Identities = 20/33 (60%), Positives = 30/33 (90%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQ 326
LPK+YDP++PPDPERW+PK+ER+++K K K+ +
Sbjct: 194 LPKNYDPNVPPDPERWLPKQERAAYKKKQKKNR 226
>gb|ORX88451.1| protein prenylyltransferase [Basidiobolus meristosporus CBS 931.73]
Length = 661
Score = 56.6 bits (135), Expect = 2e-06
Identities = 21/32 (65%), Positives = 29/32 (90%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRK 329
LPK+YDPS PDPERW+PKRER++++ KGK++
Sbjct: 567 LPKNYDPSATPDPERWLPKRERAAYRPKGKKR 598
>gb|EDL89886.1| rCG57035, isoform CRA_a [Rattus norvegicus]
Length = 140
Score = 54.3 bits (129), Expect = 2e-06
Identities = 23/39 (58%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKA--KGKRKQQLMK 314
LPK+YDP + PDPERW+P RERS ++ KGK+K Q+ K
Sbjct: 31 LPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGK 69
>gb|KIH62085.1| SRP72 RNA-binding domain protein [Ancylostoma duodenale]
Length = 492
Score = 56.2 bits (134), Expect = 2e-06
Identities = 20/33 (60%), Positives = 30/33 (90%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQ 326
LPK+YDP++PPDPERW+PK+ER+++K K K+ +
Sbjct: 396 LPKNYDPNVPPDPERWLPKQERAAYKKKQKKNR 428
>ref|XP_013307598.1| tetratricopeptide repeat protein [Necator americanus]
gb|ETN85371.1| tetratricopeptide repeat protein [Necator americanus]
Length = 578
Score = 56.2 bits (134), Expect = 2e-06
Identities = 20/33 (60%), Positives = 30/33 (90%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQ 326
LPK+YDP++PPDPERW+PK+ER+++K K K+ +
Sbjct: 489 LPKNYDPNVPPDPERWLPKQERAAYKKKQKKNR 521
>gb|EPB77045.1| SRP72 RNA-binding domain protein [Ancylostoma ceylanicum]
Length = 617
Score = 56.2 bits (134), Expect = 2e-06
Identities = 20/33 (60%), Positives = 30/33 (90%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQ 326
LPK+YDP++PPDPERW+PK+ER+++K K K+ +
Sbjct: 540 LPKNYDPNVPPDPERWLPKQERAAYKKKQKKNR 572
>ref|XP_003740064.1| PREDICTED: signal recognition particle subunit SRP72 [Galendromus
occidentalis]
Length = 656
Score = 56.2 bits (134), Expect = 2e-06
Identities = 21/34 (61%), Positives = 30/34 (88%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKAKGKRKQQ 323
LPK+YDP++ PDPERW+P+ ERS+FK +GKR ++
Sbjct: 568 LPKNYDPNVQPDPERWLPRWERSTFKKRGKRARE 601
>ref|XP_015807134.1| PREDICTED: signal recognition particle subunit SRP72
[Nothobranchius furzeri]
Length = 670
Score = 56.2 bits (134), Expect = 2e-06
Identities = 24/39 (61%), Positives = 32/39 (82%), Gaps = 2/39 (5%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSF--KAKGKRKQQLMK 314
LPK+YDP++ PDPERW+P RERS + K KGK+K+Q+ K
Sbjct: 559 LPKNYDPNVTPDPERWLPMRERSYYRGKKKGKKKEQIGK 597
>pdb|5M73|D Chain D, Structure Of The Human Srp S Domain With Srp72 Rna-binding
Domain
pdb|5M73|H Chain H, Structure Of The Human Srp S Domain With Srp72 Rna-binding
Domain
Length = 158
Score = 54.3 bits (129), Expect = 2e-06
Identities = 23/39 (58%), Positives = 30/39 (76%), Gaps = 2/39 (5%)
Frame = -1
Query: 424 LPKSYDPSIPPDPERWIPKRERSSFKA--KGKRKQQLMK 314
LPK+YDP + PDPERW+P RERS ++ KGK+K Q+ K
Sbjct: 52 LPKNYDPKVTPDPERWLPMRERSYYRGRKKGKKKDQIGK 90