BLASTX nr result

ID: Ophiopogon25_contig00050353 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00050353
         (656 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKC18064.1| hypothetical protein RhiirA5_345445 [Rhizophagus ...   120   6e-31
dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizop...    95   6e-30
gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MO...   120   9e-28

>gb|PKC18064.1| hypothetical protein RhiirA5_345445 [Rhizophagus irregularis]
          Length = 166

 Score =  120 bits (302), Expect = 6e-31
 Identities = 60/78 (76%), Positives = 60/78 (76%)
 Frame = -3

Query: 654 GSPTLNNGNANFWTDPNPSNSDTMINSNGSNGVKTTTASVEDLERQXXXXXXXXXXXXXX 475
           GSPTLNNGNAN WTDPNPSNSDTMINSNGSNGVKTTTASVEDLERQ              
Sbjct: 89  GSPTLNNGNANLWTDPNPSNSDTMINSNGSNGVKTTTASVEDLERQVANARREAEVLELR 148

Query: 474 XXXVIKKNTHHLQDAWKS 421
              VIKKNTHHLQDAWKS
Sbjct: 149 LRAVIKKNTHHLQDAWKS 166


>dbj|GBC37745.1| CCR4-NOT transcription complex subunit 4 [Rhizophagus irregularis
            DAOM 181602]
          Length = 1270

 Score = 95.1 bits (235), Expect(2) = 6e-30
 Identities = 44/45 (97%), Positives = 44/45 (97%)
 Frame = -3

Query: 654  GSPTLNNGNANFWTDPNPSNSDTMINSNGSNGVKTTTASVEDLER 520
            GSPTLNNGNAN WTDPNPSNSDTMINSNGSNGVKTTTASVEDLER
Sbjct: 1195 GSPTLNNGNANLWTDPNPSNSDTMINSNGSNGVKTTTASVEDLER 1239



 Score = 64.3 bits (155), Expect(2) = 6e-30
 Identities = 31/32 (96%), Positives = 31/32 (96%)
 Frame = -1

Query: 437  RMLGSHKGINISVAFISRLSKHFASFPLSVFF 342
            RMLGSHKGIN SVAFISRLSKHFASFPLSVFF
Sbjct: 1239 RMLGSHKGINTSVAFISRLSKHFASFPLSVFF 1270


>gb|EXX69317.1| CCR4-NOT core ubiquitin-protein ligase subunit MOT2 [Rhizophagus
            irregularis DAOM 197198w]
          Length = 1335

 Score =  120 bits (302), Expect = 9e-28
 Identities = 60/78 (76%), Positives = 60/78 (76%)
 Frame = -3

Query: 654  GSPTLNNGNANFWTDPNPSNSDTMINSNGSNGVKTTTASVEDLERQXXXXXXXXXXXXXX 475
            GSPTLNNGNAN WTDPNPSNSDTMINSNGSNGVKTTTASVEDLERQ              
Sbjct: 1258 GSPTLNNGNANLWTDPNPSNSDTMINSNGSNGVKTTTASVEDLERQVANARREAEVLELR 1317

Query: 474  XXXVIKKNTHHLQDAWKS 421
               VIKKNTHHLQDAWKS
Sbjct: 1318 LRAVIKKNTHHLQDAWKS 1335


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