BLASTX nr result

ID: Ophiopogon25_contig00050242 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00050242
         (451 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|POG65180.1| hypothetical protein GLOIN_2v1668848 [Rhizophagus...    65   2e-11
gb|PKK63789.1| hypothetical protein RhiirC2_716730 [Rhizophagus ...    58   1e-07

>gb|POG65180.1| hypothetical protein GLOIN_2v1668848 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 62

 Score = 65.5 bits (158), Expect = 2e-11
 Identities = 32/64 (50%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
 Frame = +2

Query: 11  MYFSTFLKVIFVAFLCFLTLNILNIEAGPIK--TKNVTALGCLPVNVTCDNRETCCNTCL 184
           MY+ TFLKVIF+  LCFLT   LN+EA P+   TK+   L CLP    CD    CC+ C+
Sbjct: 1   MYYPTFLKVIFIVSLCFLT---LNVEAQPLNGVTKSKRQLSCLPSGSRCDKFSNCCSRCV 57

Query: 185 ANRC 196
             RC
Sbjct: 58  KGRC 61


>gb|PKK63789.1| hypothetical protein RhiirC2_716730 [Rhizophagus irregularis]
          Length = 157

 Score = 58.2 bits (139), Expect = 1e-07
 Identities = 33/67 (49%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
 Frame = +2

Query: 2   QYTMYFSTFLKVIFVAFLCFLTLNILNIEAGPIKTKNVTALGCLPVNVTC-DNRETCCN- 175
           QYTMYFSTFLKVIFV  LCFLTLN+   +      K    L CLP    C      CC+ 
Sbjct: 91  QYTMYFSTFLKVIFVVSLCFLTLNV-EAQRNNAVAKAKDPLSCLPSGSPCGSGYPRCCSY 149

Query: 176 TCLANRC 196
            C+  RC
Sbjct: 150 RCVRGRC 156


Top