BLASTX nr result

ID: Ophiopogon25_contig00050178 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00050178
         (426 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC16438.1| hypothetical protein RIR_0459200 [Rhizophagus ir...    58   4e-14
gb|ANQ32211.1| MATA-HMG [Rhizophagus irregularis] >gi|1042418201...    60   6e-11
gb|ANQ32210.1| MATA-HMG [Rhizophagus irregularis] >gi|1042418197...    60   6e-11

>dbj|GBC16438.1| hypothetical protein RIR_0459200 [Rhizophagus irregularis DAOM
           181602]
          Length = 202

 Score = 58.2 bits (139), Expect(2) = 4e-14
 Identities = 25/26 (96%), Positives = 25/26 (96%)
 Frame = -2

Query: 146 FCPQCFNPIEETSYPKNNIDLPSEST 69
           F PQCFNPIEETSYPKNNIDLPSEST
Sbjct: 175 FAPQCFNPIEETSYPKNNIDLPSEST 200



 Score = 47.4 bits (111), Expect(2) = 4e-14
 Identities = 20/20 (100%), Positives = 20/20 (100%)
 Frame = -3

Query: 220 PTPTEIYDITPQFLLPSDNY 161
           PTPTEIYDITPQFLLPSDNY
Sbjct: 153 PTPTEIYDITPQFLLPSDNY 172


>gb|ANQ32211.1| MATA-HMG [Rhizophagus irregularis]
 gb|ANQ32214.1| MATA-HMG [Rhizophagus irregularis]
          Length = 415

 Score = 60.5 bits (145), Expect(2) = 6e-11
 Identities = 28/29 (96%), Positives = 28/29 (96%), Gaps = 1/29 (3%)
 Frame = -3

Query: 244 YSLYSQHPPTPT-EIYDITPQFLLPSDNY 161
           YSLYSQHPPTPT EIYDITPQFLLPSDNY
Sbjct: 269 YSLYSQHPPTPTTEIYDITPQFLLPSDNY 297



 Score = 34.3 bits (77), Expect(2) = 6e-11
 Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 10/41 (24%)
 Frame = -2

Query: 146 FCPQCFNPIEETSY------PKNNID----LPSESTFEYLL 54
           F PQCFNPIEETSY        NN D    + S   F Y +
Sbjct: 300 FAPQCFNPIEETSYISPHALTNNNFDSFLNIQSVDKFPYFI 340


>gb|ANQ32210.1| MATA-HMG [Rhizophagus irregularis]
 gb|ANQ32212.1| MATA-HMG [Rhizophagus irregularis]
 gb|ANQ32213.1| MATA-HMG [Rhizophagus irregularis]
 dbj|GBC17455.1| hmg-box transcription factor [Rhizophagus irregularis DAOM 181602]
          Length = 415

 Score = 60.5 bits (145), Expect(2) = 6e-11
 Identities = 28/29 (96%), Positives = 28/29 (96%), Gaps = 1/29 (3%)
 Frame = -3

Query: 244 YSLYSQHPPTPT-EIYDITPQFLLPSDNY 161
           YSLYSQHPPTPT EIYDITPQFLLPSDNY
Sbjct: 269 YSLYSQHPPTPTTEIYDITPQFLLPSDNY 297



 Score = 34.3 bits (77), Expect(2) = 6e-11
 Identities = 19/41 (46%), Positives = 21/41 (51%), Gaps = 10/41 (24%)
 Frame = -2

Query: 146 FCPQCFNPIEETSY------PKNNID----LPSESTFEYLL 54
           F PQCFNPIEETSY        NN D    + S   F Y +
Sbjct: 300 FAPQCFNPIEETSYISPHALTNNNFDSFLNIQSVDKFPYFI 340


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