BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00050024
         (1454 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABC17959.1| RNA polymerase II second largest subunit, partial...   854   0.0  
gb|PKK76623.1| DNA-directed RNA polymerase II subunit RPB2 [Rhiz...   871   0.0  
gb|EXX69835.1| Rpb2p [Rhizophagus irregularis DAOM 197198w] >gi|...   871   0.0  
gb|PKY44798.1| DNA-directed RNA polymerase II subunit RPB2 [Rhiz...   870   0.0  
dbj|GBC12777.1| DNA-directed RNA polymerase II subunit RPB2 [Rhi...   871   0.0  
gb|ABM27012.1| RNA polymerase II second largest subunit, partial...   813   0.0  
gb|ABM27011.1| RNA polymerase II second largest subunit, partial...   812   0.0  
gb|ABC17945.1| RNA polymerase II second largest subunit, partial...   749   0.0  
gb|ABM27013.1| RNA polymerase II second largest subunit, partial...   745   0.0  
gb|ATP61809.1| RNA polymerase II second largest subunit, partial...   675   0.0  
gb|ATP61815.1| RNA polymerase II second largest subunit, partial...   668   0.0  
gb|ABC17942.1| RNA polymerase II second largest subunit, partial...   660   0.0  
gb|ABC17941.1| RNA polymerase II second largest subunit, partial...   659   0.0  
gb|ABM27010.1| RNA polymerase II second largest subunit, partial...   662   0.0  
gb|ABM27009.1| RNA polymerase II second largest subunit, partial...   662   0.0  
gb|ABC17952.1| RNA polymerase II second largest subunit, partial...   655   0.0  
emb|CEG83450.1| Putative DNA-directed RNA polymerase [Rhizopus m...   661   0.0  
gb|AEX16088.1| RPB2, partial [Mucor circinelloides f. lusitanicu...   658   0.0  
emb|CEG69569.1| Putative DNA-directed RNA polymerase [Rhizopus m...   664   0.0  
gb|ORX89614.1| DNA-dependent RNA polymerase II second largest su...   666   0.0  

>gb|ABC17959.1| RNA polymerase II second largest subunit, partial [Rhizophagus
            intraradices]
          Length = 764

 Score =  854 bits (2206), Expect = 0.0
 Identities = 441/485 (90%), Positives = 444/485 (91%), Gaps = 1/485 (0%)
 Frame = -3

Query: 1452 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1273
            RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC
Sbjct: 174  RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 233

Query: 1272 RPLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNP 1093
            RPLFIVE ARLKITKGLIQKLD    KNRQAGQV                       DNP
Sbjct: 234  RPLFIVESARLKITKGLIQKLD----KNRQAGQVEESDDDLFDDDENIDDDMEEEDIDNP 289

Query: 1092 EXXXXXXXXXXXS-FGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQ 916
            E           S FGWQELISNSVVEYIDAEEEETVMICMTPEDLA+SRVFHETGEVKQ
Sbjct: 290  EQPSRRRRKKKKSSFGWQELISNSVVEYIDAEEEETVMICMTPEDLASSRVFHETGEVKQ 349

Query: 915  EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 736
            EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK
Sbjct: 350  EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 409

Query: 735  QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 556
            QAMGIYVTN+QLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ
Sbjct: 410  QAMGIYVTNHQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 469

Query: 555  EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLED 376
            EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKE+TLRLKHGTYEKLED
Sbjct: 470  EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKETTLRLKHGTYEKLED 529

Query: 375  DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT 196
            DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTH QRDASTPMRSTETGIVDQVMVT
Sbjct: 530  DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHTQRDASTPMRSTETGIVDQVMVT 589

Query: 195  TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 16
            TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH
Sbjct: 590  TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 649

Query: 15   AIPSR 1
            AIPSR
Sbjct: 650  AIPSR 654


>gb|PKK76623.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus irregularis]
          Length = 1284

 Score =  871 bits (2251), Expect = 0.0
 Identities = 447/485 (92%), Positives = 449/485 (92%), Gaps = 1/485 (0%)
 Frame = -3

Query: 1452 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1273
            RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC
Sbjct: 603  RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 662

Query: 1272 RPLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNP 1093
            RPLFIVE ARLKITKGLIQKLDVYKMKNRQAGQV                       DNP
Sbjct: 663  RPLFIVESARLKITKGLIQKLDVYKMKNRQAGQVEESDDDLFDDDGNIDDDMEEEDIDNP 722

Query: 1092 EXXXXXXXXXXXS-FGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQ 916
            E           S FGWQELISNSVVEYIDAEEEETVMICMTPEDLA+SRVFHETGEVKQ
Sbjct: 723  EQSSRRRRKKKKSSFGWQELISNSVVEYIDAEEEETVMICMTPEDLASSRVFHETGEVKQ 782

Query: 915  EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 736
            EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK
Sbjct: 783  EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 842

Query: 735  QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 556
            QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ
Sbjct: 843  QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 902

Query: 555  EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLED 376
            EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKE+TLRLKHGTYEKLED
Sbjct: 903  EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKETTLRLKHGTYEKLED 962

Query: 375  DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT 196
            DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT
Sbjct: 963  DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT 1022

Query: 195  TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 16
            TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH
Sbjct: 1023 TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 1082

Query: 15   AIPSR 1
            AIPSR
Sbjct: 1083 AIPSR 1087


>gb|EXX69835.1| Rpb2p [Rhizophagus irregularis DAOM 197198w]
 gb|PKC15990.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus irregularis]
 gb|PKC73782.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus irregularis]
 gb|PKY18013.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus irregularis]
 gb|POG79284.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus irregularis
            DAOM 181602=DAOM 197198]
          Length = 1287

 Score =  871 bits (2251), Expect = 0.0
 Identities = 447/485 (92%), Positives = 449/485 (92%), Gaps = 1/485 (0%)
 Frame = -3

Query: 1452 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1273
            RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC
Sbjct: 606  RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 665

Query: 1272 RPLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNP 1093
            RPLFIVE ARLKITKGLIQKLDVYKMKNRQAGQV                       DNP
Sbjct: 666  RPLFIVESARLKITKGLIQKLDVYKMKNRQAGQVEESDDDLFDDDENIDDDMEEEDIDNP 725

Query: 1092 EXXXXXXXXXXXS-FGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQ 916
            E           S FGWQELISNSVVEYIDAEEEETVMICMTPEDLA+SRVFHETGEVKQ
Sbjct: 726  EQSSRRRRKKKKSSFGWQELISNSVVEYIDAEEEETVMICMTPEDLASSRVFHETGEVKQ 785

Query: 915  EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 736
            EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK
Sbjct: 786  EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 845

Query: 735  QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 556
            QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ
Sbjct: 846  QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 905

Query: 555  EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLED 376
            EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKE+TLRLKHGTYEKLED
Sbjct: 906  EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKETTLRLKHGTYEKLED 965

Query: 375  DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT 196
            DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT
Sbjct: 966  DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT 1025

Query: 195  TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 16
            TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH
Sbjct: 1026 TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 1085

Query: 15   AIPSR 1
            AIPSR
Sbjct: 1086 AIPSR 1090


>gb|PKY44798.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus irregularis]
          Length = 1284

 Score =  870 bits (2247), Expect = 0.0
 Identities = 446/485 (91%), Positives = 448/485 (92%), Gaps = 1/485 (0%)
 Frame = -3

Query: 1452 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1273
            RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC
Sbjct: 603  RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 662

Query: 1272 RPLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNP 1093
            RPLFIVE ARLKITKGLIQKLDVYKMKNRQAGQV                       DNP
Sbjct: 663  RPLFIVESARLKITKGLIQKLDVYKMKNRQAGQVEESDDDLFDDDENIDDDMEEEDIDNP 722

Query: 1092 EXXXXXXXXXXXS-FGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQ 916
            E           S FGWQELISNSVVEYIDAEEEETVMICMTPEDLA+SRVFHETGEVKQ
Sbjct: 723  EQSSRRRRKKKKSSFGWQELISNSVVEYIDAEEEETVMICMTPEDLASSRVFHETGEVKQ 782

Query: 915  EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 736
            EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK
Sbjct: 783  EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 842

Query: 735  QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 556
            QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ
Sbjct: 843  QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 902

Query: 555  EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLED 376
            EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKE+TLRLKHGTYEKLED
Sbjct: 903  EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKETTLRLKHGTYEKLED 962

Query: 375  DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT 196
            DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTH QRDASTPMRSTETGIVDQVMVT
Sbjct: 963  DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHTQRDASTPMRSTETGIVDQVMVT 1022

Query: 195  TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 16
            TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH
Sbjct: 1023 TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 1082

Query: 15   AIPSR 1
            AIPSR
Sbjct: 1083 AIPSR 1087


>dbj|GBC12777.1| DNA-directed RNA polymerase II subunit RPB2 [Rhizophagus irregularis
            DAOM 181602]
          Length = 1650

 Score =  871 bits (2251), Expect = 0.0
 Identities = 447/485 (92%), Positives = 449/485 (92%), Gaps = 1/485 (0%)
 Frame = -3

Query: 1452 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1273
            RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC
Sbjct: 1002 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1061

Query: 1272 RPLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNP 1093
            RPLFIVE ARLKITKGLIQKLDVYKMKNRQAGQV                       DNP
Sbjct: 1062 RPLFIVESARLKITKGLIQKLDVYKMKNRQAGQVEESDDDLFDDDENIDDDMEEEDIDNP 1121

Query: 1092 EXXXXXXXXXXXS-FGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQ 916
            E           S FGWQELISNSVVEYIDAEEEETVMICMTPEDLA+SRVFHETGEVKQ
Sbjct: 1122 EQSSRRRRKKKKSSFGWQELISNSVVEYIDAEEEETVMICMTPEDLASSRVFHETGEVKQ 1181

Query: 915  EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 736
            EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK
Sbjct: 1182 EKAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGK 1241

Query: 735  QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 556
            QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ
Sbjct: 1242 QAMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQ 1301

Query: 555  EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLED 376
            EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKE+TLRLKHGTYEKLED
Sbjct: 1302 EDSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKETTLRLKHGTYEKLED 1361

Query: 375  DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT 196
            DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT
Sbjct: 1362 DGLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVT 1421

Query: 195  TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 16
            TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH
Sbjct: 1422 TNAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPH 1481

Query: 15   AIPSR 1
            AIPSR
Sbjct: 1482 AIPSR 1486


>gb|ABM27012.1| RNA polymerase II second largest subunit, partial [Funneliformis
            mosseae]
          Length = 883

 Score =  813 bits (2101), Expect = 0.0
 Identities = 411/484 (84%), Positives = 430/484 (88%)
 Frame = -3

Query: 1452 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1273
            +DN KVFVNGKW GISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIRE+ELRIYTDAGRVC
Sbjct: 364  KDNTKVFVNGKWAGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIRERELRIYTDAGRVC 423

Query: 1272 RPLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNP 1093
            RPLFIVE  RL+ITKGLIQKLDV+KMK                                 
Sbjct: 424  RPLFIVENERLRITKGLIQKLDVFKMKKMT------------------------------ 453

Query: 1092 EXXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQE 913
                         FGWQ+LISNSV+EYIDAEEEETVMICMTPEDLAA+RVFHETGE KQE
Sbjct: 454  -------------FGWQDLISNSVIEYIDAEEEETVMICMTPEDLAAARVFHETGETKQE 500

Query: 912  KAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ 733
            KAHERD+AARVK++TNLKI++WTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ
Sbjct: 501  KAHERDVAARVKSETNLKIHSWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ 560

Query: 732  AMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE 553
            AMGIYVTNYQLRMDTLANILYYPQKP+VTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE
Sbjct: 561  AMGIYVTNYQLRMDTLANILYYPQKPLVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE 620

Query: 552  DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDD 373
            DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKE+TLRLKHGTYEKLE+D
Sbjct: 621  DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKETTLRLKHGTYEKLEED 680

Query: 372  GLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTT 193
            GLIAPGTRVSGDDIIIGKVTPIS +T+ELGQR+TTH +RDASTPMRSTETGIVDQVMVTT
Sbjct: 681  GLIAPGTRVSGDDIIIGKVTPISPDTVELGQRKTTHTKRDASTPMRSTETGIVDQVMVTT 740

Query: 192  NAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHA 13
            NAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGI PDLVINPHA
Sbjct: 741  NAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGITPDLVINPHA 800

Query: 12   IPSR 1
            IPSR
Sbjct: 801  IPSR 804


>gb|ABM27011.1| RNA polymerase II second largest subunit, partial [Funneliformis
            mosseae]
          Length = 883

 Score =  812 bits (2097), Expect = 0.0
 Identities = 410/484 (84%), Positives = 430/484 (88%)
 Frame = -3

Query: 1452 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1273
            +DN KVFVNGKW GISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIRE+ELRIYTDAGRVC
Sbjct: 364  KDNTKVFVNGKWAGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIRERELRIYTDAGRVC 423

Query: 1272 RPLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNP 1093
            RPLFIVE  RL+ITKGLIQKLDV+KMK                                 
Sbjct: 424  RPLFIVENERLRITKGLIQKLDVFKMKKMT------------------------------ 453

Query: 1092 EXXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQE 913
                         FGWQ+LISNSV+EYIDAEEEETVMICMTPEDLAA+RVFHETGE KQE
Sbjct: 454  -------------FGWQDLISNSVIEYIDAEEEETVMICMTPEDLAAARVFHETGETKQE 500

Query: 912  KAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ 733
            KAHERD+AARVK++TNLKI++WTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ
Sbjct: 501  KAHERDVAARVKSETNLKIHSWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ 560

Query: 732  AMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE 553
            AMGIYVTNYQLRMDTLANILYYPQKP+VTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE
Sbjct: 561  AMGIYVTNYQLRMDTLANILYYPQKPLVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE 620

Query: 552  DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDD 373
            DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKE+TLRLKHGTYEKLE+D
Sbjct: 621  DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKETTLRLKHGTYEKLEED 680

Query: 372  GLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTT 193
            GLIAPGTRVSGDDIIIGKVTPIS +T+ELGQR+T+H +RDASTPMRSTETGIVDQVMVTT
Sbjct: 681  GLIAPGTRVSGDDIIIGKVTPISPDTVELGQRKTSHTKRDASTPMRSTETGIVDQVMVTT 740

Query: 192  NAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHA 13
            NAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGI PDLVINPHA
Sbjct: 741  NAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGITPDLVINPHA 800

Query: 12   IPSR 1
            IPSR
Sbjct: 801  IPSR 804


>gb|ABC17945.1| RNA polymerase II second largest subunit, partial [Dentiscutata
            heterogama]
          Length = 761

 Score =  749 bits (1935), Expect = 0.0
 Identities = 378/484 (78%), Positives = 411/484 (84%)
 Frame = -3

Query: 1452 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1273
            RDN KVFVNGKW GIS++PEQL+ TL+GLRR+VDVSPEVSVVRDIREKELRIYTDAGRVC
Sbjct: 174  RDNTKVFVNGKWAGISTAPEQLANTLRGLRRSVDVSPEVSVVRDIREKELRIYTDAGRVC 233

Query: 1272 RPLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNP 1093
            RPLFIVE   L I+K LI  LD    K R +GQV                        N 
Sbjct: 234  RPLFIVEDQCLVISKELINNLD---QKGRTSGQVYDDEYPDEDNRHVDGEEIQGE---NA 287

Query: 1092 EXXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQE 913
            +            + W +LISN  +EYIDAEEEETVMICMTPEDLAAS  F++TG  +  
Sbjct: 288  QEQSQKRRQDRQVYVWHDLISNGAIEYIDAEEEETVMICMTPEDLAASMHFYQTGIARTS 347

Query: 912  KAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ 733
            K HE+D+AARVK+++NL I+TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ
Sbjct: 348  KTHEKDVAARVKSESNLSIHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ 407

Query: 732  AMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE 553
            AMGIYVTNYQLRMDTLANILYYPQKP+VTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE
Sbjct: 408  AMGIYVTNYQLRMDTLANILYYPQKPLVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE 467

Query: 552  DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDD 373
            +SVIMNQSSIDRGLFRSIFYRSYMDQEKKVG+L+IEEF+KPT+E+TLRLKHGTYEKLE+D
Sbjct: 468  NSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGILSIEEFDKPTRETTLRLKHGTYEKLEED 527

Query: 372  GLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTT 193
            GLIAPGTRVSGDDIIIGKVTPI   T+ELGQR+ TH  RDASTPMRSTE GIVDQVMVTT
Sbjct: 528  GLIAPGTRVSGDDIIIGKVTPIPEHTIELGQRKNTHTHRDASTPMRSTENGIVDQVMVTT 587

Query: 192  NAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHA 13
            NAEGMKFVKVRVRSTR+PQMGDKFASRHGQKGTIGITYRQEDMPFT+EGI PDL+INPHA
Sbjct: 588  NAEGMKFVKVRVRSTRIPQMGDKFASRHGQKGTIGITYRQEDMPFTSEGITPDLIINPHA 647

Query: 12   IPSR 1
            IPSR
Sbjct: 648  IPSR 651


>gb|ABM27013.1| RNA polymerase II second largest subunit, partial [Gigaspora
            gigantea]
          Length = 894

 Score =  745 bits (1924), Expect = 0.0
 Identities = 377/484 (77%), Positives = 408/484 (84%)
 Frame = -3

Query: 1452 RDNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVC 1273
            RDN KVFVNGKW GIS++PEQL+ TL+GLRR+VDVSPEVSVVRDIREKELRIYTDAGRVC
Sbjct: 364  RDNTKVFVNGKWAGISTAPEQLANTLRGLRRSVDVSPEVSVVRDIREKELRIYTDAGRVC 423

Query: 1272 RPLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNP 1093
            RPLFIVE   L I+K LI  LD                                   +N 
Sbjct: 424  RPLFIVEDQCLVISKELIDNLD-------------------------------DIHGENA 452

Query: 1092 EXXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQE 913
            E            + W +LISN  +EYIDAEEEETVMICMTPEDLAASR +++TG  +  
Sbjct: 453  EKQSQKRRQDRQVYVWHDLISNGAIEYIDAEEEETVMICMTPEDLAASRNYYQTGISQAS 512

Query: 912  KAHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ 733
            KAHE+DIAARVK+++NL I+TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ
Sbjct: 513  KAHEKDIAARVKSESNLSIHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQ 572

Query: 732  AMGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE 553
            AMGIYVTNYQLRMDTLANILYYPQKP+VTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE
Sbjct: 573  AMGIYVTNYQLRMDTLANILYYPQKPLVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQE 632

Query: 552  DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDD 373
            DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVG+L+IEEF+KPT+E+TLRLKHGTYEKLEDD
Sbjct: 633  DSVIMNQSSIDRGLFRSIFYRSYMDQEKKVGILSIEEFDKPTRETTLRLKHGTYEKLEDD 692

Query: 372  GLIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTT 193
            GLIAPGTRVSGDDIIIGKVTPI   T+ELGQR+ +H  RDASTPMRSTE GIVDQVMVTT
Sbjct: 693  GLIAPGTRVSGDDIIIGKVTPIPEHTIELGQRKDSHTHRDASTPMRSTENGIVDQVMVTT 752

Query: 192  NAEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHA 13
            NAEGMKFVKVRVRSTR+PQMGDKFASRHGQKGTIGITYRQEDMPFT+EGI PDL+INPHA
Sbjct: 753  NAEGMKFVKVRVRSTRIPQMGDKFASRHGQKGTIGITYRQEDMPFTSEGITPDLIINPHA 812

Query: 12   IPSR 1
            IPSR
Sbjct: 813  IPSR 816


>gb|ATP61809.1| RNA polymerase II second largest subunit, partial [Endogone sp.]
          Length = 510

 Score =  675 bits (1742), Expect = 0.0
 Identities = 344/483 (71%), Positives = 385/483 (79%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  K+FVNG WVGI   P +L  TLK LRR VD+SPEVSVVRDIREKELR+YTDAGR CR
Sbjct: 48   DATKIFVNGVWVGIHRDPAELVRTLKELRRCVDISPEVSVVRDIREKELRLYTDAGRCCR 107

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PLFIVE  +L I K  I +L   +  + Q+                              
Sbjct: 108  PLFIVEKQKLLIKKDHITRLAESREDDTQS------------------------------ 137

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        +GWQ+L+S  +VEYIDAEEEET MICMTPEDLA SR   ETG   +E 
Sbjct: 138  ------------YGWQDLVSGGLVEYIDAEEEETAMICMTPEDLAESREMAETGFAPKE- 184

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
               RD+A+RVK+  +   +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 185  ---RDVASRVKSQNSGYAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 241

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MGIY+TNYQ+RMDTLANILYYPQKP+VTTR+ME+LRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 242  MGIYLTNYQVRMDTLANILYYPQKPLVTTRSMEYLRFRELPAGQNAIVAILCYSGYNQED 301

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            SVIMNQSSIDRGLFRS+F+RSYMD EKKVGM+ +EEFEKPT+++TLRLKHGTYEKLE+DG
Sbjct: 302  SVIMNQSSIDRGLFRSLFFRSYMDAEKKVGMMVMEEFEKPTRDTTLRLKHGTYEKLEEDG 361

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSG+DIIIGK  PI  ++ ELGQR  TH +RDASTP+RSTETGIVDQVMVTTN
Sbjct: 362  LIAPGTRVSGEDIIIGKTAPIPPDSEELGQRTGTHSKRDASTPLRSTETGIVDQVMVTTN 421

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             EG+KFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPF+AEG+ PDL+INPHAI
Sbjct: 422  QEGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFSAEGVTPDLIINPHAI 481

Query: 9    PSR 1
            PSR
Sbjct: 482  PSR 484


>gb|ATP61815.1| RNA polymerase II second largest subunit, partial [Jimgerdemannia
            flammicorona]
          Length = 510

 Score =  668 bits (1723), Expect = 0.0
 Identities = 344/483 (71%), Positives = 381/483 (78%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  K+FVNG WVGI   P +L  TLK LRR VD+SPEVSVVRDIREKELR+YTD+GR CR
Sbjct: 48   DATKIFVNGVWVGIHRDPAELVRTLKELRRCVDISPEVSVVRDIREKELRLYTDSGRCCR 107

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PL IVE  RL I K  I KL   +  + Q+                              
Sbjct: 108  PLSIVENQRLLINKEHIMKLAESREDDTQS------------------------------ 137

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        +GWQ+L++  +VEYI AEEEET MICMTPEDLA SR   ETG     +
Sbjct: 138  ------------YGWQDLVAGGIVEYIGAEEEETAMICMTPEDLAESRENAETGM----Q 181

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
              ERD+A+RV++  +   +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 182  PKERDVASRVRSQNSGYAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 241

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MGIY+TNYQ+RMDTLANILYYPQKP+VT+R+ME+LRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 242  MGIYLTNYQVRMDTLANILYYPQKPLVTSRSMEYLRFRELPAGQNAIVAILCYSGYNQED 301

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            SVIMNQSSIDRGLFRS+F+RSYMD EKKVGM+ +EEFEKPT+ESTLRLKHGTYEKLEDDG
Sbjct: 302  SVIMNQSSIDRGLFRSLFFRSYMDAEKKVGMMVMEEFEKPTRESTLRLKHGTYEKLEDDG 361

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSGDDIIIGK  PI  ++ ELGQR TTH +RDAS P+RSTETGIVDQVMVTTN
Sbjct: 362  LIAPGTRVSGDDIIIGKTAPIPPDSEELGQRTTTHSKRDASMPLRSTETGIVDQVMVTTN 421

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             EG+KFVKVRVRSTRVPQMGDK ASR GQKGTIGITYRQEDMPF+AEGI PDLVINPHAI
Sbjct: 422  QEGLKFVKVRVRSTRVPQMGDKSASRRGQKGTIGITYRQEDMPFSAEGITPDLVINPHAI 481

Query: 9    PSR 1
            PSR
Sbjct: 482  PSR 484


>gb|ABC17942.1| RNA polymerase II second largest subunit, partial [Basidiobolus
            ranarum]
          Length = 720

 Score =  660 bits (1703), Expect = 0.0
 Identities = 332/483 (68%), Positives = 375/483 (77%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  K+FVNG WVGI   P  L  T++  RR VD+SPEVS+VRDIR+KE+R YTDAGRVCR
Sbjct: 174  DATKIFVNGVWVGIHRDPGNLIETMRRFRRRVDISPEVSIVRDIRDKEIRFYTDAGRVCR 233

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PL++VE  R+ + K  +  L + +                                    
Sbjct: 234  PLYVVENQRITLRKEHVVALQMREYDGEP------------------------------- 262

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        FGWQ+L+ N +VEY+DAEEEE  MICMTPEDLA SR++ + G + + +
Sbjct: 263  ------------FGWQDLVVNGIVEYLDAEEEEVSMICMTPEDLAESRMYSKLGYIPERE 310

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
            A   DIA+RVK+   L  +TWTHCEIHPSMILG CASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 311  A---DIASRVKSSAALITHTWTHCEIHPSMILGTCASIIPFPDHNQSPRNTYQSAMGKQA 367

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MGIYVTNYQLRMDT+ANILYYPQKP+ TTRAME+LRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 368  MGIYVTNYQLRMDTMANILYYPQKPLCTTRAMEYLRFRELPAGQNAIVAILCYSGYNQED 427

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            S+IMNQ+SIDRGLFRSIFYRSYMDQEKKVGM+ +EEFEKPT+ESTLRLK GTYEKLE DG
Sbjct: 428  SLIMNQTSIDRGLFRSIFYRSYMDQEKKVGMMVMEEFEKPTRESTLRLKRGTYEKLEGDG 487

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSGDDIIIGK  PI  ++ ELGQR  TH +RDASTP+RSTE GIVDQVM+TTN
Sbjct: 488  LIAPGTRVSGDDIIIGKTAPIPPDSEELGQRTKTHNKRDASTPLRSTENGIVDQVMLTTN 547

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             EG+KFVKVRVRSTRVPQMGDKFASRHGQKGTIG+TYRQEDMPF  EGI PDL+INPHAI
Sbjct: 548  QEGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGVTYRQEDMPFNREGIVPDLIINPHAI 607

Query: 9    PSR 1
            PSR
Sbjct: 608  PSR 610


>gb|ABC17941.1| RNA polymerase II second largest subunit, partial [Endogone
            pisiformis]
          Length = 720

 Score =  659 bits (1699), Expect = 0.0
 Identities = 337/483 (69%), Positives = 378/483 (78%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  K+FVNG WVGI   P +L  TLK LRR VD+SPEVSVVRDIREKELR+YTDAGR CR
Sbjct: 174  DATKIFVNGVWVGIHRDPAELVRTLKELRRCVDISPEVSVVRDIREKELRLYTDAGRCCR 233

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PLFIVE  +L I K  I KL   +  + Q+                              
Sbjct: 234  PLFIVEKQKLLIKKDHITKLAESREDDTQS------------------------------ 263

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        +GWQ+L+S  +VEYIDAEEEET MICMTPEDL+ SR   ETG   +E 
Sbjct: 264  ------------YGWQDLVSGGLVEYIDAEEEETAMICMTPEDLSESREMAETGFAPKE- 310

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
               RD+A+RVK+  +   +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSA     
Sbjct: 311  ---RDVASRVKSQNSGYAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAXXXXX 367

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
              IY+TNYQ+RMDTLANILYYPQKP+VTTR+ME+LRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 368  XXIYLTNYQVRMDTLANILYYPQKPLVTTRSMEYLRFRELPAGQNAIVAILCYSGYNQED 427

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            SVIMNQSSIDRGLFRS+F+RSYMD EKKVGM+ +EEFEKPT+++TLRLKHGTYEKLE+DG
Sbjct: 428  SVIMNQSSIDRGLFRSLFFRSYMDAEKKVGMMVMEEFEKPTRDTTLRLKHGTYEKLEEDG 487

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSG+DIIIGK  PI  ++ ELGQR  TH +RDASTP+RSTETGIVDQVMVTTN
Sbjct: 488  LIAPGTRVSGEDIIIGKTAPIPPDSEELGQRTGTHSKRDASTPLRSTETGIVDQVMVTTN 547

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             EG+KFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPF+AEG+ PDL+INPHAI
Sbjct: 548  QEGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFSAEGVTPDLIINPHAI 607

Query: 9    PSR 1
            PSR
Sbjct: 608  PSR 610


>gb|ABM27010.1| RNA polymerase II second largest subunit, partial [Basidiobolus
            ranarum]
          Length = 883

 Score =  662 bits (1709), Expect = 0.0
 Identities = 332/483 (68%), Positives = 376/483 (77%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  K+FVNG WVGI   P  L  T++  RR VD+SPEVS+VRDIR+KE+R YTDAGRVCR
Sbjct: 368  DATKIFVNGVWVGIHRDPGNLIETMRRFRRRVDISPEVSIVRDIRDKEIRFYTDAGRVCR 427

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PL++VE  R+ + K  +  L + +                                    
Sbjct: 428  PLYVVENQRITLRKEHVVALQMREYDGEP------------------------------- 456

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        FGWQ+L+ N +VEY+DAEEEE  MICMTPEDL+ SR++ + G + +  
Sbjct: 457  ------------FGWQDLVVNGIVEYLDAEEEEVSMICMTPEDLSESRMYSKLGYIPER- 503

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
              E D+A+RVK+   L  +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 504  --EVDVASRVKSSAALITHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 561

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MGIYVTNYQLRMDT+ANILYYPQKP+ TTRAME+LRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 562  MGIYVTNYQLRMDTMANILYYPQKPLCTTRAMEYLRFRELPAGQNAIVAILCYSGYNQED 621

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            S+IMNQ+SIDRGLFRSIFYRSYMDQEKKVGM+ +EEFEKPT+ESTLRLKHGTYEKLE DG
Sbjct: 622  SLIMNQTSIDRGLFRSIFYRSYMDQEKKVGMMVMEEFEKPTRESTLRLKHGTYEKLEGDG 681

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSGDDIIIGK  PI  ++ ELGQR  TH +RDASTP+RSTE GIVDQVM+TTN
Sbjct: 682  LIAPGTRVSGDDIIIGKTAPIPPDSEELGQRTKTHSKRDASTPLRSTENGIVDQVMLTTN 741

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             EG+KFVKVRVRSTRVPQMGDKFASRHGQKGTIG+TYRQEDMPF  EGI PDL+INPHAI
Sbjct: 742  QEGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGVTYRQEDMPFNNEGIVPDLIINPHAI 801

Query: 9    PSR 1
            PSR
Sbjct: 802  PSR 804


>gb|ABM27009.1| RNA polymerase II second largest subunit, partial [Mucor hiemalis]
          Length = 884

 Score =  662 bits (1707), Expect = 0.0
 Identities = 331/483 (68%), Positives = 381/483 (78%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  KVFVNG W+GI   P +L  +LK +RR+VD+SPEVS+VRDIREKELR+YTDAGR CR
Sbjct: 372  DATKVFVNGVWIGIHRDPGELINSLKQMRRSVDISPEVSIVRDIREKELRMYTDAGRCCR 431

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PLF+VE  +L++ +  I ++                                        
Sbjct: 432  PLFLVENQQLRLNREHIMRIQ--------------------------------------- 452

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        FGWQ++I++ +VEY+DA+EEET MICMTPEDLA SR+  + G   QE 
Sbjct: 453  -------DTEDDFGWQDMIADGIVEYVDADEEETAMICMTPEDLAESRMTAQYGAPLQET 505

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
               RD+A+RVK+ T    +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 506  ---RDLASRVKSQTGSYSHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 562

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MG+Y+TN+Q RMDTLANILYYPQKP+ TTR+MEFLRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 563  MGVYLTNFQTRMDTLANILYYPQKPLTTTRSMEFLRFRELPAGQNAIVAILCYSGYNQED 622

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            SVIMNQSSIDRGLFRS+F+R+YMD EKK GM+ +EEFEKPT++STLRLKHGTYEKLEDDG
Sbjct: 623  SVIMNQSSIDRGLFRSLFFRTYMDAEKKAGMMFMEEFEKPTRDSTLRLKHGTYEKLEDDG 682

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSGDDIIIGK  PI  ++ ELGQR TTH +RDASTP+RSTETGIVDQVM+TTN
Sbjct: 683  LIAPGTRVSGDDIIIGKTAPIPADSEELGQRTTTHNKRDASTPLRSTETGIVDQVMLTTN 742

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             +G+KFVKVRVRSTRVPQMGDKFASRHGQKGTIG+TYRQED PF+AEGI PDL+INPHAI
Sbjct: 743  QDGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGMTYRQEDFPFSAEGITPDLIINPHAI 802

Query: 9    PSR 1
            PSR
Sbjct: 803  PSR 805


>gb|ABC17952.1| RNA polymerase II second largest subunit, partial [Umbelopsis
            ramanniana]
          Length = 717

 Score =  655 bits (1689), Expect = 0.0
 Identities = 331/483 (68%), Positives = 380/483 (78%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  K+FVNG WVGI   P +L  +LK +RR+VD+SPEVS+VRDIREKELR+YTDAGR CR
Sbjct: 174  DATKIFVNGVWVGIHRDPGELITSLKQMRRSVDISPEVSIVRDIREKELRMYTDAGRCCR 233

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PLFIVE  +LK+TK  +  L                                     +P+
Sbjct: 234  PLFIVEDQQLKLTKDHVALLQ------------------------------------DPD 257

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        + WQ+LIS+ ++EYIDAEEEET MICMTPEDLA SR   E G+  Q  
Sbjct: 258  SN----------YRWQDLISDGIIEYIDAEEEETAMICMTPEDLAESRYSAEYGKPLQS- 306

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
              +RD+A+R+KT  +   +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 307  --DRDVASRLKTQQSGYSHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 364

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MG+Y+TNYQ+RMDTLANILYYPQKP+ TTR+MEFLRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 365  MGVYLTNYQVRMDTLANILYYPQKPLTTTRSMEFLRFRELPAGQNAIVAILCYSGYNQED 424

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            SVIMNQSSIDRGLFRS+F R+YMD EKK GM+ +EEFEKPT+++TLRLKHGTYEKLE+DG
Sbjct: 425  SVIMNQSSIDRGLFRSLFLRTYMDAEKKAGMMFMEEFEKPTRDNTLRLKHGTYEKLEEDG 484

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSGDDIIIGK  PI  ++ ELGQR   H +RDASTP+RSTETGIVDQVMVTTN
Sbjct: 485  LIAPGTRVSGDDIIIGKTAPIPADSEELGQRTKGHNKRDASTPLRSTETGIVDQVMVTTN 544

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             +G+KFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYR ED+PF+ EG+ PD++INPHAI
Sbjct: 545  QDGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRHEDLPFSGEGVTPDIIINPHAI 604

Query: 9    PSR 1
            PSR
Sbjct: 605  PSR 607


>emb|CEG83450.1| Putative DNA-directed RNA polymerase [Rhizopus microsporus]
          Length = 896

 Score =  661 bits (1705), Expect = 0.0
 Identities = 330/483 (68%), Positives = 384/483 (79%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  KVFVNG W+GI   P +L  +LK +RR+VD+SPEVS+VRDIREKELR+YTDAGR CR
Sbjct: 267  DATKVFVNGVWIGIHRDPGELVTSLKQMRRSVDISPEVSIVRDIREKELRMYTDAGRCCR 326

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PLF+V+  +L++T+  + +L                                     +P+
Sbjct: 327  PLFLVDNQQLRLTREHVSRLQ------------------------------------DPD 350

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        +GWQ+LI+  +VEY+DA+EEET MICMTPEDLA SR+  + G   Q+ 
Sbjct: 351  DD----------YGWQDLIAEGIVEYVDADEEETAMICMTPEDLAESRMAAQYGAPLQQT 400

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
               R +A+RVK+ T    +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 401  ---RSLASRVKSQTGTYAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 457

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MG+Y+TN+Q+RMDTLANILYYPQKP+ TTR+MEFLRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 458  MGVYLTNFQMRMDTLANILYYPQKPLTTTRSMEFLRFRELPAGQNAIVAILCYSGYNQED 517

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            SVIMNQSSIDRGLFRS+F+R+YMD EKK GM+ +EEFEKPT+E+TLRLKHGTYEKLEDDG
Sbjct: 518  SVIMNQSSIDRGLFRSLFFRTYMDAEKKAGMMFMEEFEKPTRETTLRLKHGTYEKLEDDG 577

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSGDDIIIGK  PI  E+ ELGQR +TH +RDASTP+RSTETGIVDQVM+TTN
Sbjct: 578  LIAPGTRVSGDDIIIGKTAPIPPESEELGQRTSTHSKRDASTPLRSTETGIVDQVMLTTN 637

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             +G+KFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQED PF+AEGI PDL+INPHAI
Sbjct: 638  QDGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDFPFSAEGITPDLIINPHAI 697

Query: 9    PSR 1
            PS+
Sbjct: 698  PSQ 700


>gb|AEX16088.1| RPB2, partial [Mucor circinelloides f. lusitanicus]
 gb|OAC98965.1| hypothetical protein MUCCIDRAFT_149398 [Mucor circinelloides f.
            lusitanicus CBS 277.49]
          Length = 931

 Score =  658 bits (1698), Expect = 0.0
 Identities = 329/483 (68%), Positives = 380/483 (78%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  KVFVNG W+GI   P +L  +LK +RR+VD+SPEVS+VRDIREKELR+YTDAGR CR
Sbjct: 381  DATKVFVNGVWIGIHRDPGELINSLKQMRRSVDISPEVSIVRDIREKELRMYTDAGRCCR 440

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PLF+VE  +LK+T+  + ++                                        
Sbjct: 441  PLFLVENQQLKLTRDHVLRIQ--------------------------------------- 461

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        +GWQ +I++ +VEY+DA+EEET MICMTPEDLA SR+  E G   QE 
Sbjct: 462  -------DTEDDYGWQNMIADGIVEYVDADEEETAMICMTPEDLAESRMTAEYGAPLQET 514

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
               RD+ +RVK+ T    +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 515  ---RDLFSRVKSQTGSYSHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 571

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MG+Y+TN+Q RMDTLANILYYPQKP+ TTR+MEFLRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 572  MGVYLTNFQTRMDTLANILYYPQKPLTTTRSMEFLRFRELPAGQNAIVAILCYSGYNQED 631

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            SVIMNQSSIDRGLFRS+F+R+YMD EKK GM+ +EEFEKPT+++TLRLKHGTYEKLE+DG
Sbjct: 632  SVIMNQSSIDRGLFRSLFFRTYMDAEKKAGMMFMEEFEKPTRDTTLRLKHGTYEKLEEDG 691

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSGDDIIIGK  PI  ++ ELGQR TTH +RDASTP+RSTETGIVDQVM+TTN
Sbjct: 692  LIAPGTRVSGDDIIIGKTAPIPADSEELGQRTTTHNKRDASTPLRSTETGIVDQVMLTTN 751

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             +G+KFVKVRVRSTRVPQMGDKFASRHGQKGTIG+TYRQED PF+AEGI PDL+INPHAI
Sbjct: 752  QDGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGMTYRQEDFPFSAEGITPDLIINPHAI 811

Query: 9    PSR 1
            PSR
Sbjct: 812  PSR 814


>emb|CEG69569.1| Putative DNA-directed RNA polymerase [Rhizopus microsporus]
          Length = 1114

 Score =  664 bits (1712), Expect = 0.0
 Identities = 332/483 (68%), Positives = 384/483 (79%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  KVFVNG W+GI   P +L  +LK +RR+VD+SPEVS+VRDIREKELR+YTDAGR CR
Sbjct: 481  DATKVFVNGVWIGIHRDPGELVTSLKQMRRSVDISPEVSIVRDIREKELRMYTDAGRCCR 540

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PLF+V+  +L++T+  + +L                                     +P+
Sbjct: 541  PLFLVDNQQLRLTREHVSRLQ------------------------------------DPD 564

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        +GWQ+LI+  +VEY+DA+EEET MICMTPEDLA SR+  + G   Q+ 
Sbjct: 565  DD----------YGWQDLIAEGIVEYVDADEEETAMICMTPEDLAESRMAAQYGAPLQQT 614

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
               R +A+RVK+ T    +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 615  ---RSLASRVKSQTGTYAHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 671

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MG+Y+TN+Q+RMDTLANILYYPQKP+ TTR+MEFLRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 672  MGVYLTNFQMRMDTLANILYYPQKPLTTTRSMEFLRFRELPAGQNAIVAILCYSGYNQED 731

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            SVIMNQSSIDRGLFRS+F+R+YMD EKK GM+ +EEFEKPT+ESTLRLKHGTYEKLEDDG
Sbjct: 732  SVIMNQSSIDRGLFRSLFFRTYMDAEKKAGMMFMEEFEKPTRESTLRLKHGTYEKLEDDG 791

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSGDDIIIGK  PI  E+ ELGQR +TH +RDASTP+RSTETGIVDQVM+TTN
Sbjct: 792  LIAPGTRVSGDDIIIGKTAPIPPESEELGQRTSTHSKRDASTPLRSTETGIVDQVMLTTN 851

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             +G+KFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQED PF+AEGI PDL+INPHAI
Sbjct: 852  QDGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDFPFSAEGITPDLIINPHAI 911

Query: 9    PSR 1
            PSR
Sbjct: 912  PSR 914


>gb|ORX89614.1| DNA-dependent RNA polymerase II second largest subunit [Basidiobolus
            meristosporus CBS 931.73]
          Length = 1216

 Score =  666 bits (1718), Expect = 0.0
 Identities = 333/483 (68%), Positives = 377/483 (78%)
 Frame = -3

Query: 1449 DNAKVFVNGKWVGISSSPEQLSYTLKGLRRTVDVSPEVSVVRDIREKELRIYTDAGRVCR 1270
            D  K+FVNG WVGI   P  L  T++  RR VD+SPEVS+VRDIR+KE+R YTDAGRVCR
Sbjct: 582  DATKIFVNGVWVGIHRDPGNLIETMRRFRRRVDISPEVSIVRDIRDKEIRFYTDAGRVCR 641

Query: 1269 PLFIVEGARLKITKGLIQKLDVYKMKNRQAGQVXXXXXXXXXXXXXXXXXXXXXXXDNPE 1090
            PL++VE  R+ + K  +Q L + +                                    
Sbjct: 642  PLYVVENQRIMLRKEHVQALQMREYDGEP------------------------------- 670

Query: 1089 XXXXXXXXXXXSFGWQELISNSVVEYIDAEEEETVMICMTPEDLAASRVFHETGEVKQEK 910
                        FGWQ+L+ N +VEY+DAEEEE  MICMTPEDLA SR++ + G + +  
Sbjct: 671  ------------FGWQDLVVNGIVEYLDAEEEEVSMICMTPEDLAESRMYSKLGYIPER- 717

Query: 909  AHERDIAARVKTDTNLKIYTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 730
              E D+A+RVK+   L  +TWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA
Sbjct: 718  --EVDVASRVKSSAALITHTWTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQA 775

Query: 729  MGIYVTNYQLRMDTLANILYYPQKPVVTTRAMEFLRFRELPAGQNAIVAILCYSGYNQED 550
            MGIYVTNYQLRMDT+ANILYYPQKP+ TTRAME+LRFRELPAGQNAIVAILCYSGYNQED
Sbjct: 776  MGIYVTNYQLRMDTMANILYYPQKPLCTTRAMEYLRFRELPAGQNAIVAILCYSGYNQED 835

Query: 549  SVIMNQSSIDRGLFRSIFYRSYMDQEKKVGMLTIEEFEKPTKESTLRLKHGTYEKLEDDG 370
            S+IMNQ+SIDRGLFRSIFYRSYMDQEKKVGM+ +EEFEKPT+E+TLRLKHGTYEKLE DG
Sbjct: 836  SLIMNQTSIDRGLFRSIFYRSYMDQEKKVGMMVMEEFEKPTRETTLRLKHGTYEKLEGDG 895

Query: 369  LIAPGTRVSGDDIIIGKVTPISNETLELGQRQTTHVQRDASTPMRSTETGIVDQVMVTTN 190
            LIAPGTRVSGDDIIIGK  PI  ++ ELGQR  TH +RDASTP+RSTE GIVDQVM+TTN
Sbjct: 896  LIAPGTRVSGDDIIIGKTAPIPPDSEELGQRTKTHTKRDASTPLRSTENGIVDQVMLTTN 955

Query: 189  AEGMKFVKVRVRSTRVPQMGDKFASRHGQKGTIGITYRQEDMPFTAEGIAPDLVINPHAI 10
             EG+KFVKVRVRSTRVPQMGDKFASRHGQKGTIG+TYRQEDMPF  EGI PDL+INPHAI
Sbjct: 956  QEGLKFVKVRVRSTRVPQMGDKFASRHGQKGTIGVTYRQEDMPFNNEGIVPDLIINPHAI 1015

Query: 9    PSR 1
            PSR
Sbjct: 1016 PSR 1018