BLASTX nr result

ID: Ophiopogon25_contig00049325 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00049325
         (481 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX51626.1| Gcn4p [Rhizophagus irregularis DAOM 197198w] >gi|...   121   1e-30
gb|PKC65772.1| hypothetical protein RhiirA1_420097 [Rhizophagus ...   121   2e-30
dbj|GBC32348.1| amino acid starvation-responsive transcription f...    75   2e-13

>gb|EXX51626.1| Gcn4p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC32347.1| amino acid starvation-responsive transcription factor gcn4
           [Rhizophagus irregularis DAOM 181602]
          Length = 298

 Score =  121 bits (304), Expect = 1e-30
 Identities = 72/146 (49%), Positives = 91/146 (62%), Gaps = 8/146 (5%)
 Frame = +1

Query: 67  MSPYHQDFSQYIDHASTGSPQVKTGEYDSY----LYDLLTGNDIFHTE--TPIYDISPVL 228
           M    Q F Q +D ASTGSPQ K+G YDS     LY+L+ GND+   +     YD SP L
Sbjct: 1   MMSQDQGFVQCVDPASTGSPQAKSGAYDSSDFIELYNLVAGNDLLANDLFNQTYDFSPEL 60

Query: 229 ASSMTTPSLVLDVSTPQDLNDSPIFTS--FTSPSLDPPLGFFPDLTSNPSVAAAARRSLM 402
            SSMTTPSL+ DVSTPQDLNDSP+F +   +SPSLDP +GFFPDL ++ + +    RSLM
Sbjct: 61  TSSMTTPSLIYDVSTPQDLNDSPLFNAPFMSSPSLDPAVGFFPDLPNDHNASNTNTRSLM 120

Query: 403 HVNIGSSVTIPVDDASPLMAPSVTIP 480
              + S+ ++P         PSV IP
Sbjct: 121 --QLSSTPSVP-------SLPSVNIP 137


>gb|PKC65772.1| hypothetical protein RhiirA1_420097 [Rhizophagus irregularis]
 gb|PKY29809.1| hypothetical protein RhiirB3_418297 [Rhizophagus irregularis]
          Length = 297

 Score =  121 bits (303), Expect = 2e-30
 Identities = 71/141 (50%), Positives = 90/141 (63%), Gaps = 8/141 (5%)
 Frame = +1

Query: 82  QDFSQYIDHASTGSPQVKTGEYDSY----LYDLLTGNDIFHTE--TPIYDISPVLASSMT 243
           Q F Q +D ASTGSPQ K+G YDS     LY+L+ GND+   +     YD SP L SSMT
Sbjct: 5   QGFVQCVDPASTGSPQAKSGAYDSSDFIELYNLVAGNDLLANDLFNQTYDFSPELTSSMT 64

Query: 244 TPSLVLDVSTPQDLNDSPIFTS--FTSPSLDPPLGFFPDLTSNPSVAAAARRSLMHVNIG 417
           TPSL+ DVSTPQDLNDSP+F +   +SPSLDP +GFFPDL ++ + +    RSLM   + 
Sbjct: 65  TPSLIYDVSTPQDLNDSPLFNAPFMSSPSLDPAVGFFPDLPNDHNASNTNTRSLM--QLS 122

Query: 418 SSVTIPVDDASPLMAPSVTIP 480
           S+ ++P         PSV IP
Sbjct: 123 STPSVP-------SLPSVNIP 136


>dbj|GBC32348.1| amino acid starvation-responsive transcription factor gcn4
           [Rhizophagus irregularis DAOM 181602]
          Length = 235

 Score = 75.1 bits (183), Expect = 2e-13
 Identities = 42/83 (50%), Positives = 55/83 (66%), Gaps = 2/83 (2%)
 Frame = +1

Query: 238 MTTPSLVLDVSTPQDLNDSPIFTS--FTSPSLDPPLGFFPDLTSNPSVAAAARRSLMHVN 411
           MTTPSL+ DVSTPQDLNDSP+F +   +SPSLDP +GFFPDL ++ + +    RSLM   
Sbjct: 1   MTTPSLIYDVSTPQDLNDSPLFNAPFMSSPSLDPAVGFFPDLPNDHNASNTNTRSLM--Q 58

Query: 412 IGSSVTIPVDDASPLMAPSVTIP 480
           + S+ ++P         PSV IP
Sbjct: 59  LSSTPSVP-------SLPSVNIP 74


Top