BLASTX nr result

ID: Ophiopogon25_contig00049273 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00049273
         (525 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK57186.1| hypothetical protein RhiirC2_397278 [Rhizophagus ...    49   1e-07
gb|EXX59901.1| hypothetical protein RirG_184840 [Rhizophagus irr...    49   2e-07

>gb|PKK57186.1| hypothetical protein RhiirC2_397278 [Rhizophagus irregularis]
          Length = 137

 Score = 49.3 bits (116), Expect(2) = 1e-07
 Identities = 25/30 (83%), Positives = 27/30 (90%)
 Frame = +1

Query: 148 KLASASTALLDAVNARPKLTQAFRLEVKFL 237
           +LASAST LL+AV  RPKLTQAFRLEVKFL
Sbjct: 26  ELASASTLLLNAVKVRPKLTQAFRLEVKFL 55



 Score = 34.3 bits (77), Expect(2) = 1e-07
 Identities = 14/21 (66%), Positives = 15/21 (71%)
 Frame = +2

Query: 233 FYTCLDTVAWYDCYLRINSNL 295
           F  CLD V WYD YLRIN +L
Sbjct: 61  FRICLDPVLWYDVYLRINPSL 81


>gb|EXX59901.1| hypothetical protein RirG_184840 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC47776.1| hypothetical protein: PROVISIONAL [Rhizophagus irregularis DAOM
           181602]
          Length = 317

 Score = 48.5 bits (114), Expect(2) = 2e-07
 Identities = 25/29 (86%), Positives = 25/29 (86%)
 Frame = +1

Query: 151 LASASTALLDAVNARPKLTQAFRLEVKFL 237
           LA AST LL AV ARPKLTQAFRLEVKFL
Sbjct: 26  LAKASTLLLSAVEARPKLTQAFRLEVKFL 54



 Score = 33.9 bits (76), Expect(2) = 2e-07
 Identities = 13/21 (61%), Positives = 14/21 (66%)
 Frame = +2

Query: 233 FYTCLDTVAWYDCYLRINSNL 295
           F  CLD V WYD YLR+N  L
Sbjct: 60  FQICLDPVLWYDVYLRVNPRL 80


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