BLASTX nr result

ID: Ophiopogon25_contig00048487 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00048487
         (804 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY40968.1| hypothetical protein RhiirA4_454462 [Rhizophagus ...    63   3e-08

>gb|PKY40968.1| hypothetical protein RhiirA4_454462 [Rhizophagus irregularis]
          Length = 218

 Score = 63.2 bits (152), Expect = 3e-08
 Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
 Frame = +1

Query: 232 KGHRKYFKDVDMFWNKVERRHTEAEASSSIMRDTTEVFKXXXXXXXXXXXXXXXTIIEY- 408
           KGHRKYFKDVD FW KVER   E+EA + I++DTT+VFK               T+++  
Sbjct: 47  KGHRKYFKDVDSFWQKVERNCAESEAFNFIIQDTTKVFKNSILNVNSSIKKINKTMLKIA 106

Query: 409 NKENSDHNLGKRRDLDDREE 468
           N E S      +    DREE
Sbjct: 107 NNEGSSREKRVQLSKGDREE 126


Top