BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00048200
         (382 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX52602.1| Rpo26p [Rhizophagus irregularis DAOM 197198w] >gi...   160   9e-48
gb|EXX52603.1| Rpo26p [Rhizophagus irregularis DAOM 197198w]          154   3e-45
gb|PKC08459.1| RNA polymerase Rpb6 [Rhizophagus irregularis] >gi...    86   2e-19
gb|KJA25840.1| hypothetical protein HYPSUDRAFT_37328 [Hypholoma ...    76   8e-15
ref|XP_003955462.1| hypothetical protein KAFR_0B00270 [Kazachsta...    71   6e-13
ref|XP_020073631.1| subunit common to RNA polymerases I, II, and...    70   1e-12
gb|KLO20674.1| RNA polymerase Rpb6 [Schizopora paradoxa]               70   2e-12
gb|EEB92478.1| hypothetical protein MPER_09004 [Moniliophthora p...    70   2e-12
gb|ESK98072.1| dna-directed rna polymerases i [Moniliophthora ro...    70   2e-12
ref|XP_021871613.1| RNA polymerase, subunit omega/K/RPB6 [Kockov...    70   2e-12
emb|CEI38705.1| unnamed protein product [Fusarium venenatum]           69   3e-12
gb|AQZ11996.1| RPO26 (YPR187W) [Zygosaccharomyces parabailii]          69   3e-12
emb|CDH10538.1| probable DNA-directed RNA polymerases I, II, and...    69   3e-12
gb|KIM47787.1| hypothetical protein M413DRAFT_62922 [Hebeloma cy...    69   4e-12
gb|ODN92575.1| DNA-directed RNA polymerase I, II, and III subuni...    69   4e-12
gb|OHW90864.1| DNA-directed RNA polymerases I [Colletotrichum in...    69   4e-12
gb|KZL65408.1| DNA-directed RNA polymerase and III subunit RPABC...    69   4e-12
ref|XP_018162557.1| RNA polymerase Rpb6 [Colletotrichum higginsi...    69   4e-12
gb|KZV74872.1| RNA polymerase Rpb6 [Peniophora sp. CONT]               68   4e-12
dbj|GAO13131.1| hypothetical protein UVI_02024890 [Ustilaginoide...    69   5e-12

>gb|EXX52602.1| Rpo26p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC28281.1| DNA-directed RNA polymerases I, II, and III subunit RPABC2
           [Rhizophagus irregularis DAOM 181602]
          Length = 178

 Score =  160 bits (405), Expect = 9e-48
 Identities = 83/96 (86%), Positives = 83/96 (86%)
 Frame = -3

Query: 290 EELPEDDYNXXXXXXXXXXXXXPNGFGGDEVREGGINVQNGVAILTNGAEGTEMDVNKQV 111
           EELPEDDYN             PNGFGGDEVREGGINVQNGVAILTNGAEGTEMDVNKQV
Sbjct: 17  EELPEDDYNEPDILEEELEPELPNGFGGDEVREGGINVQNGVAILTNGAEGTEMDVNKQV 76

Query: 110 TVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV 3
           TVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV
Sbjct: 77  TVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV 112


>gb|EXX52603.1| Rpo26p [Rhizophagus irregularis DAOM 197198w]
          Length = 177

 Score =  154 bits (388), Expect = 3e-45
 Identities = 82/96 (85%), Positives = 82/96 (85%)
 Frame = -3

Query: 290 EELPEDDYNXXXXXXXXXXXXXPNGFGGDEVREGGINVQNGVAILTNGAEGTEMDVNKQV 111
           EELP DDYN             PNGFGGDEVREGGINVQNGVAILTNGAEGTEMDVNKQV
Sbjct: 17  EELP-DDYNEPDILEEELEPELPNGFGGDEVREGGINVQNGVAILTNGAEGTEMDVNKQV 75

Query: 110 TVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV 3
           TVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV
Sbjct: 76  TVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV 111


>gb|PKC08459.1| RNA polymerase Rpb6 [Rhizophagus irregularis]
 gb|PKC74312.1| RNA polymerase Rpb6 [Rhizophagus irregularis]
 gb|PKK76253.1| RNA polymerase Rpb6 [Rhizophagus irregularis]
 gb|PKY22067.1| RNA polymerase Rpb6 [Rhizophagus irregularis]
 gb|PKY37370.1| RNA polymerase Rpb6 [Rhizophagus irregularis]
 gb|POG78082.1| RNA polymerase, subunit omega/K/RPB6 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 109

 Score = 86.3 bits (212), Expect = 2e-19
 Identities = 43/43 (100%), Positives = 43/43 (100%)
 Frame = -3

Query: 131 MDVNKQVTVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV 3
           MDVNKQVTVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV
Sbjct: 1   MDVNKQVTVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV 43


>gb|KJA25840.1| hypothetical protein HYPSUDRAFT_37328 [Hypholoma sublateritium
           FD-334 SS-4]
          Length = 168

 Score = 76.3 bits (186), Expect = 8e-15
 Identities = 40/70 (57%), Positives = 50/70 (71%), Gaps = 1/70 (1%)
 Frame = -3

Query: 209 GDEVREGGINVQNGVAILTNGAEGTE-MDVNKQVTVEKEKVTTPYMTKYEKARILGTRAL 33
           GDEV  G +N  +G   + NG E T    ++ +    KE+VTTPY+TKYE+ARILGTRAL
Sbjct: 54  GDEVTHGAVNGADGNQDMVNGDEVTTGAGISGERQPNKERVTTPYLTKYERARILGTRAL 113

Query: 32  QISMNAPILV 3
           QISMNAP+LV
Sbjct: 114 QISMNAPVLV 123


>ref|XP_003955462.1| hypothetical protein KAFR_0B00270 [Kazachstania africana CBS 2517]
 emb|CCF56327.1| hypothetical protein KAFR_0B00270 [Kazachstania africana CBS 2517]
          Length = 166

 Score = 71.2 bits (173), Expect = 6e-13
 Identities = 36/69 (52%), Positives = 46/69 (66%), Gaps = 5/69 (7%)
 Frame = -3

Query: 194 EGGINVQNGVAILTNGAEGTEMDVNKQVTVEK-----EKVTTPYMTKYEKARILGTRALQ 30
           +GG+  +NG  I+T+G         K+   EK     ++ TTPYMTKYE+ARILGTRALQ
Sbjct: 52  DGGLKDENGNTIITSGFNDEYQSTRKKTLKEKAIAKEDRTTTPYMTKYERARILGTRALQ 111

Query: 29  ISMNAPILV 3
           ISMNAP+ V
Sbjct: 112 ISMNAPVFV 120


>ref|XP_020073631.1| subunit common to RNA polymerases I, II, and III [Cyberlindnera
           jadinii NRRL Y-1542]
 emb|CEP21209.1| unnamed protein product [Cyberlindnera jadinii]
 gb|ODV76592.1| subunit common to RNA polymerases I, II, and III [Cyberlindnera
           jadinii NRRL Y-1542]
          Length = 151

 Score = 70.1 bits (170), Expect = 1e-12
 Identities = 42/74 (56%), Positives = 49/74 (66%), Gaps = 6/74 (8%)
 Frame = -3

Query: 206 DEVREGGINVQNGVAILTNGAEGTEMD-----VNKQVTVEKEK-VTTPYMTKYEKARILG 45
           +EV E G  + NG      GAEG   D       K++ + KEK  TTPYMTKYE+ARILG
Sbjct: 34  EEVAEDGRVIVNG----GTGAEGFNNDQQRRKTTKELAIPKEKRTTTPYMTKYERARILG 89

Query: 44  TRALQISMNAPILV 3
           TRALQISMNAP+LV
Sbjct: 90  TRALQISMNAPVLV 103


>gb|KLO20674.1| RNA polymerase Rpb6 [Schizopora paradoxa]
          Length = 161

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 40/81 (49%), Positives = 52/81 (64%), Gaps = 9/81 (11%)
 Frame = -3

Query: 218 GFGGDEVREGGINVQNGVAILTNGAEGTEMDVNK-QVTV--------EKEKVTTPYMTKY 66
           G GG++  + GIN ++G   +    EG E D    Q T          KE++TTPY+TKY
Sbjct: 38  GQGGED--QEGINGEDGETAMNGDMEGHEPDAQPAQPTTGIIGDRQPNKERITTPYLTKY 95

Query: 65  EKARILGTRALQISMNAPILV 3
           E+AR+LGTRALQISMNAP+LV
Sbjct: 96  ERARVLGTRALQISMNAPVLV 116


>gb|EEB92478.1| hypothetical protein MPER_09004 [Moniliophthora perniciosa FA553]
          Length = 169

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 42/80 (52%), Positives = 51/80 (63%), Gaps = 10/80 (12%)
 Frame = -3

Query: 212 GGDEVREGG---INVQNGV---AILTNGAEGTEMDVNKQVTVE----KEKVTTPYMTKYE 63
           GG+ V + G   IN  NGV     + NG E  E      +  E    KE++TTPY+TKYE
Sbjct: 45  GGEGVEQAGDPQINGVNGVDHDQEMANGEEPQEPPAQASILGERQPNKERITTPYLTKYE 104

Query: 62  KARILGTRALQISMNAPILV 3
           +ARILGTRALQISMNAP+LV
Sbjct: 105 RARILGTRALQISMNAPVLV 124


>gb|ESK98072.1| dna-directed rna polymerases i [Moniliophthora roreri MCA 2997]
          Length = 169

 Score = 70.1 bits (170), Expect = 2e-12
 Identities = 40/79 (50%), Positives = 50/79 (63%), Gaps = 7/79 (8%)
 Frame = -3

Query: 218 GFGGDEVREGGINVQNGV---AILTNGAEGTEMDVNKQVTVE----KEKVTTPYMTKYEK 60
           G G ++  +  IN  NG+     + NG E  E      +  E    KE+VTTPY+TKYE+
Sbjct: 46  GEGAEQAGDPQINGVNGIDHDQEMANGEEPQEAPAQASILGERQPNKERVTTPYLTKYER 105

Query: 59  ARILGTRALQISMNAPILV 3
           ARILGTRALQISMNAP+LV
Sbjct: 106 ARILGTRALQISMNAPVLV 124


>ref|XP_021871613.1| RNA polymerase, subunit omega/K/RPB6 [Kockovaella imperatae]
 gb|ORX37626.1| RNA polymerase, subunit omega/K/RPB6 [Kockovaella imperatae]
          Length = 154

 Score = 69.7 bits (169), Expect = 2e-12
 Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 1/74 (1%)
 Frame = -3

Query: 221 NGFGGDEVREGGINVQNGVAILTNGAEGTEMD-VNKQVTVEKEKVTTPYMTKYEKARILG 45
           NG GGD  +  G  V   + I +N     E   + K     + +VTTPYMTKYE+AR+LG
Sbjct: 35  NGEGGDGEQVDGEEVDEKMIIESNAPGDDERQRIGKSAKPNEIRVTTPYMTKYERARVLG 94

Query: 44  TRALQISMNAPILV 3
           TRALQISMNAP+LV
Sbjct: 95  TRALQISMNAPVLV 108


>emb|CEI38705.1| unnamed protein product [Fusarium venenatum]
          Length = 151

 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 37/75 (49%), Positives = 49/75 (65%), Gaps = 5/75 (6%)
 Frame = -3

Query: 212 GGDEVREGGINVQNGV-----AILTNGAEGTEMDVNKQVTVEKEKVTTPYMTKYEKARIL 48
           G D+  + G+   N V     + + N A+G +  +  +   E E+ TTPYMTKYE+ARIL
Sbjct: 33  GEDDDNQQGVQDDNIVPSGDPSAIANAAKGGDRILKDKKIPENERTTTPYMTKYERARIL 92

Query: 47  GTRALQISMNAPILV 3
           GTRALQISMNAP+LV
Sbjct: 93  GTRALQISMNAPVLV 107


>gb|AQZ11996.1| RPO26 (YPR187W) [Zygosaccharomyces parabailii]
          Length = 161

 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 11/81 (13%)
 Frame = -3

Query: 212 GGDEVREG-GINVQNGVAILTNGAEGTEMDVNKQVTVEK----------EKVTTPYMTKY 66
           GG+E  +G G   +NG  I+T G  GTE   N + T  K          ++ TTPYMTKY
Sbjct: 36  GGNEFPQGDGPKAENGHTIVTGG-NGTEEFQNYEQTRRKTMKEKAIPKDQRTTTPYMTKY 94

Query: 65  EKARILGTRALQISMNAPILV 3
           E+ARILGTRALQISMNAP+ V
Sbjct: 95  ERARILGTRALQISMNAPVFV 115


>emb|CDH10538.1| probable DNA-directed RNA polymerases I, II, and III subunit RPABC2
           [Zygosaccharomyces bailii ISA1307]
          Length = 165

 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 42/81 (51%), Positives = 51/81 (62%), Gaps = 11/81 (13%)
 Frame = -3

Query: 212 GGDEVREG-GINVQNGVAILTNGAEGTEMDVNKQVTVEK----------EKVTTPYMTKY 66
           GG+E  +G G   +NG  I+T G  GTE   N + T  K          ++ TTPYMTKY
Sbjct: 40  GGNEFPQGDGPKAENGHTIVTGG-NGTEEFQNYEQTRRKTMKEKAIPKDQRTTTPYMTKY 98

Query: 65  EKARILGTRALQISMNAPILV 3
           E+ARILGTRALQISMNAP+ V
Sbjct: 99  ERARILGTRALQISMNAPVFV 119


>gb|KIM47787.1| hypothetical protein M413DRAFT_62922 [Hebeloma cylindrosporum h7]
          Length = 166

 Score = 69.3 bits (168), Expect = 4e-12
 Identities = 37/70 (52%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
 Frame = -3

Query: 209 GDEVREGGINVQNGVAILTNGAEGTEM-DVNKQVTVEKEKVTTPYMTKYEKARILGTRAL 33
           G EV   G+N  +G   + NG + T    +  +    K +VTTPY+TKYE+ARILGTRAL
Sbjct: 52  GGEVSHEGVNGADGDQEMANGEDTTATAGITGERQPNKVRVTTPYLTKYERARILGTRAL 111

Query: 32  QISMNAPILV 3
           QISMNAP+LV
Sbjct: 112 QISMNAPVLV 121


>gb|ODN92575.1| DNA-directed RNA polymerase I, II, and III subunit RPABC2
           [Cryptococcus depauperatus CBS 7841]
          Length = 151

 Score = 68.9 bits (167), Expect = 4e-12
 Identities = 35/73 (47%), Positives = 45/73 (61%)
 Frame = -3

Query: 221 NGFGGDEVREGGINVQNGVAILTNGAEGTEMDVNKQVTVEKEKVTTPYMTKYEKARILGT 42
           +G G  E      +V   + + +N  EG      K     + +VTTPYMTKYE+AR+LGT
Sbjct: 33  DGEGNAEQDAANGDVDENMIVESNAPEGDRPRTGKAAKANEIRVTTPYMTKYERARVLGT 92

Query: 41  RALQISMNAPILV 3
           RALQISMNAP+LV
Sbjct: 93  RALQISMNAPVLV 105


>gb|OHW90864.1| DNA-directed RNA polymerases I [Colletotrichum incanum]
          Length = 153

 Score = 68.9 bits (167), Expect = 4e-12
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -3

Query: 209 GDEVREGGINVQNGVAILTNGAEGTEMDVNKQVTVEKEKVTTPYMTKYEKARILGTRALQ 30
           GDE     + V    +   N  +G E     +   + ++ TTPYMTKYE+ARILGTRALQ
Sbjct: 41  GDEEEADNVVVSGDPSAAANAGKGNEKSHRDKKIPDDQRTTTPYMTKYERARILGTRALQ 100

Query: 29  ISMNAPILV 3
           ISMNAP+LV
Sbjct: 101 ISMNAPVLV 109


>gb|KZL65408.1| DNA-directed RNA polymerase and III subunit RPABC2 [Colletotrichum
           tofieldiae]
          Length = 153

 Score = 68.9 bits (167), Expect = 4e-12
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -3

Query: 209 GDEVREGGINVQNGVAILTNGAEGTEMDVNKQVTVEKEKVTTPYMTKYEKARILGTRALQ 30
           GDE     + V    +   N  +G E     +   + ++ TTPYMTKYE+ARILGTRALQ
Sbjct: 41  GDEEEADNVVVSGDPSAAANAGKGNEKSHRDKKIPDDQRTTTPYMTKYERARILGTRALQ 100

Query: 29  ISMNAPILV 3
           ISMNAP+LV
Sbjct: 101 ISMNAPVLV 109


>ref|XP_018162557.1| RNA polymerase Rpb6 [Colletotrichum higginsianum IMI 349063]
 emb|CCF37926.1| RNA polymerase Rpb6 [Colletotrichum higginsianum]
 gb|OBR14040.1| RNA polymerase Rpb6 [Colletotrichum higginsianum IMI 349063]
          Length = 153

 Score = 68.9 bits (167), Expect = 4e-12
 Identities = 34/69 (49%), Positives = 43/69 (62%)
 Frame = -3

Query: 209 GDEVREGGINVQNGVAILTNGAEGTEMDVNKQVTVEKEKVTTPYMTKYEKARILGTRALQ 30
           GDE     + V    +   N  +G E     +   + ++ TTPYMTKYE+ARILGTRALQ
Sbjct: 41  GDEEEADNVVVSGDPSAAANSGKGNEKSHRDKKIPDDQRTTTPYMTKYERARILGTRALQ 100

Query: 29  ISMNAPILV 3
           ISMNAP+LV
Sbjct: 101 ISMNAPVLV 109


>gb|KZV74872.1| RNA polymerase Rpb6 [Peniophora sp. CONT]
          Length = 112

 Score = 67.8 bits (164), Expect = 4e-12
 Identities = 34/57 (59%), Positives = 41/57 (71%)
 Frame = -3

Query: 173 NGVAILTNGAEGTEMDVNKQVTVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV 3
           NG A   +G  G E     +    K+++TTPY+TKYE+ARILGTRALQISMNAPILV
Sbjct: 11  NGDAQPASGGAGPEAGAPPERQPNKDRITTPYLTKYERARILGTRALQISMNAPILV 67


>dbj|GAO13131.1| hypothetical protein UVI_02024890 [Ustilaginoidea virens]
          Length = 151

 Score = 68.6 bits (166), Expect = 5e-12
 Identities = 33/50 (66%), Positives = 38/50 (76%)
 Frame = -3

Query: 152 NGAEGTEMDVNKQVTVEKEKVTTPYMTKYEKARILGTRALQISMNAPILV 3
           N  +G E  V  +   E E+ TTPYMTKYE+ARILGTRALQISMNAP+LV
Sbjct: 59  NAVKGGEKSVKDKKIPENERTTTPYMTKYERARILGTRALQISMNAPVLV 108