BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00047415
         (1102 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK69658.1| DNA replication factor C, large subunit [Rhizopha...    60   6e-06
gb|POG81109.1| hypothetical protein GLOIN_2v1510569, partial [Rh...    60   6e-06
gb|PKY37935.1| DNA replication factor C, large subunit [Rhizopha...    60   6e-06
gb|EXX65319.1| replication factor C subunit 1 [Rhizophagus irreg...    60   6e-06

>gb|PKK69658.1| DNA replication factor C, large subunit [Rhizophagus irregularis]
          Length = 777

 Score = 59.7 bits (143), Expect = 6e-06
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -2

Query: 477 FRLSRKRNMSKKRLKSTINYSRIKIIYLITNTQGHKWDELNASDTKATK*LESIIKVAIK 298
           F+   K  M+   +  +    +   ++L+ NTQG+   ELNASDT++ K L+++IKVA K
Sbjct: 217 FKFKNKEWMAALLIAGSPGIGKTSSVHLVANTQGYDVIELNASDTRSKKQLDTVIKVATK 276

Query: 297 ISPSLVF---SNDKASSKEHDANELQERSKIDLL 205
            +    F    NDK+SSKEH ANE Q++  + L+
Sbjct: 277 NTSITGFFQPFNDKSSSKEH-ANEAQKKKTLILM 309


>gb|POG81109.1| hypothetical protein GLOIN_2v1510569, partial [Rhizophagus
           irregularis DAOM 181602=DAOM 197198]
          Length = 818

 Score = 59.7 bits (143), Expect = 6e-06
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -2

Query: 477 FRLSRKRNMSKKRLKSTINYSRIKIIYLITNTQGHKWDELNASDTKATK*LESIIKVAIK 298
           F+   K  M+   +  +    +   ++L+ NTQG+   ELNASDT++ K L+++IKVA K
Sbjct: 410 FKFKNKEWMAALLIAGSPGIGKTSSVHLVANTQGYDVIELNASDTRSKKQLDTVIKVATK 469

Query: 297 ISPSLVF---SNDKASSKEHDANELQERSKIDLL 205
            +    F    NDK+SSKEH ANE Q++  + L+
Sbjct: 470 NTSITGFFQPFNDKSSSKEH-ANEAQKKKTLILM 502


>gb|PKY37935.1| DNA replication factor C, large subunit [Rhizophagus irregularis]
          Length = 869

 Score = 59.7 bits (143), Expect = 6e-06
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -2

Query: 477 FRLSRKRNMSKKRLKSTINYSRIKIIYLITNTQGHKWDELNASDTKATK*LESIIKVAIK 298
           F+   K  M+   +  +    +   ++L+ NTQG+   ELNASDT++ K L+++IKVA K
Sbjct: 309 FKFKNKEWMAALLIAGSPGIGKTSSVHLVANTQGYDVIELNASDTRSKKQLDTVIKVATK 368

Query: 297 ISPSLVF---SNDKASSKEHDANELQERSKIDLL 205
            +    F    NDK+SSKEH ANE Q++  + L+
Sbjct: 369 NTSITGFFQPFNDKSSSKEH-ANEAQKKKTLILM 401


>gb|EXX65319.1| replication factor C subunit 1 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC43382.1| Replication factor C subunit 1 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC08349.1| DNA replication factor C, large subunit [Rhizophagus irregularis]
 gb|PKC65045.1| DNA replication factor C, large subunit [Rhizophagus irregularis]
 gb|PKY22466.1| DNA replication factor C, large subunit [Rhizophagus irregularis]
          Length = 970

 Score = 59.7 bits (143), Expect = 6e-06
 Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 3/94 (3%)
 Frame = -2

Query: 477 FRLSRKRNMSKKRLKSTINYSRIKIIYLITNTQGHKWDELNASDTKATK*LESIIKVAIK 298
           F+   K  M+   +  +    +   ++L+ NTQG+   ELNASDT++ K L+++IKVA K
Sbjct: 410 FKFKNKEWMAALLIAGSPGIGKTSSVHLVANTQGYDVIELNASDTRSKKQLDTVIKVATK 469

Query: 297 ISPSLVF---SNDKASSKEHDANELQERSKIDLL 205
            +    F    NDK+SSKEH ANE Q++  + L+
Sbjct: 470 NTSITGFFQPFNDKSSSKEH-ANEAQKKKTLILM 502