BLASTX nr result

ID: Ophiopogon25_contig00047409 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00047409
         (645 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX58832.1| hypothetical protein RirG_194210 [Rhizophagus irr...   266   3e-80
gb|POG68018.1| hypothetical protein GLOIN_2v1641228 [Rhizophagus...    89   9e-19

>gb|EXX58832.1| hypothetical protein RirG_194210 [Rhizophagus irregularis DAOM
            197198w]
 dbj|GBC14171.1| hypothetical protein RIR_0276000 [Rhizophagus irregularis DAOM
            181602]
          Length = 883

 Score =  266 bits (679), Expect = 3e-80
 Identities = 144/178 (80%), Positives = 149/178 (83%)
 Frame = -1

Query: 624  STSSPSTKASPVIKSSPIPNTSRPPLTSNKPYQSSPLGRSGRGMNGITNXXXXXXXXXXX 445
            STSSPSTKASPVIKSSP+PNTSRPPLTSNKPYQSSPLGRSGRGMNGITN           
Sbjct: 655  STSSPSTKASPVIKSSPVPNTSRPPLTSNKPYQSSPLGRSGRGMNGITNSSSSSSTVKKS 714

Query: 444  SPAQIXXXXXXXXXXXXXXXXXSTSGASNSVKNRNSILSTRSRSDSIISVESGKMNSDSE 265
            SPAQI                 STSGA+NSVKNRNSILSTRSRSDSIISVE+GK+NSDSE
Sbjct: 715  SPAQINNLKTSKVKSKNGSINNSTSGAANSVKNRNSILSTRSRSDSIISVENGKVNSDSE 774

Query: 264  KKSGITSVKNSVNNMRNSIIGNRTRSNSTTSVGTKNSVIGRIRSENNSSTRKTAGRDR 91
            KKSGITSVKNSVNNMRNSIIGNR+RSNSTTSVGTKNSVIGRIRSENNS TRKTAGRDR
Sbjct: 775  KKSGITSVKNSVNNMRNSIIGNRSRSNSTTSVGTKNSVIGRIRSENNSFTRKTAGRDR 832


>gb|POG68018.1| hypothetical protein GLOIN_2v1641228 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 152

 Score = 89.0 bits (219), Expect = 9e-19
 Identities = 62/151 (41%), Positives = 63/151 (41%)
 Frame = +2

Query: 74  LAELVDRSLPAVFLVEELFSDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           LAELVDRSLPAVFLV+ELFSD                                       
Sbjct: 2   LAELVDRSLPAVFLVKELFSDLILPITLFLVPTLVVLLDLDLFPMILFLILFTLFLTLVI 61

Query: 254 XXXXSESEFILPLSTLMILSERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXI 433
               SESEF LP STLMILSER                                     I
Sbjct: 62  PLFFSESEFTLPFSTLMILSERLLVLKILFLFLTLFAAPLVLLLMLPFLLFTFEVFKLLI 121

Query: 434 CAGDDFLTVEDEEEEFVIPFIXXXXXXRGEL 526
           CAGDDFLTVEDEEEEFVIPFI      RGEL
Sbjct: 122 CAGDDFLTVEDEEEEFVIPFIPLPLLPRGEL 152


Top