BLASTX nr result

ID: Ophiopogon25_contig00047398 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00047398
         (634 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX58836.1| hypothetical protein RirG_194250 [Rhizophagus irr...    55   2e-06
gb|PKY15071.1| hypothetical protein RhiirB3_401083 [Rhizophagus ...    54   3e-06

>gb|EXX58836.1| hypothetical protein RirG_194250 [Rhizophagus irregularis DAOM
           197198w]
 dbj|GBC14168.1| hypothetical protein RIR_0275700 [Rhizophagus irregularis DAOM
           181602]
 gb|PKC15338.1| hypothetical protein RhiirA5_349200 [Rhizophagus irregularis]
 gb|PKK74156.1| hypothetical protein RhiirC2_739397 [Rhizophagus irregularis]
 gb|PKY17488.1| hypothetical protein RhiirB3_404375 [Rhizophagus irregularis]
 gb|POG68020.1| hypothetical protein GLOIN_2v1641246 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 90

 Score = 54.7 bits (130), Expect = 2e-06
 Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
 Frame = -3

Query: 386 ILRRHETPEELEADSIPVSSNGDG-VEKYNGKDKVPKKVKEEGNSAQGTGDG 234
           + R  +    L++DSIPVSS+GDG +E YN  DKVPK V + GNSA+G   G
Sbjct: 38  VKREEKNQTTLQSDSIPVSSDGDGTLEAYNPDDKVPKNVTDNGNSAEGDNGG 89


>gb|PKY15071.1| hypothetical protein RhiirB3_401083 [Rhizophagus irregularis]
          Length = 87

 Score = 53.9 bits (128), Expect = 3e-06
 Identities = 34/86 (39%), Positives = 46/86 (53%), Gaps = 3/86 (3%)
 Frame = -3

Query: 482 MLSSRVFTIATXXXXXXXXXXXXXXAPLDSRAILRRHETPEEL-EADSIPVSSNGDGVEK 306
           MLSS+V +  T              AP+ +          E L +ADS+PV SNGDG+E 
Sbjct: 1   MLSSKVISFITFFVVIIAVVLSVTSAPVAAPVDAEEANKNETLLQADSVPVFSNGDGIEL 60

Query: 305 YNGKD--KVPKKVKEEGNSAQGTGDG 234
           YN  D  K+P +V ++GNSA+G G G
Sbjct: 61  YNDGDAKKIPDEVVDKGNSAKGDGSG 86


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