BLASTX nr result

ID: Ophiopogon25_contig00047077 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00047077
         (421 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|GBC37655.1| putative leucine-rich repeat-containing protein ...   164   3e-44

>dbj|GBC37655.1| putative leucine-rich repeat-containing protein ddb_g0290503
           [Rhizophagus irregularis DAOM 181602]
          Length = 1181

 Score =  164 bits (415), Expect = 3e-44
 Identities = 93/139 (66%), Positives = 95/139 (68%)
 Frame = -2

Query: 420 SVNQNINTSLSKDEKINPSKIEKVHSPINLEFDLLQYKKHERXXXXXXXXXXXXXXXXXX 241
           SVNQ+I+TSLSKD KINPSKIEKVHSPINLEFDLLQYKKHER                  
Sbjct: 59  SVNQSIHTSLSKDVKINPSKIEKVHSPINLEFDLLQYKKHERDDSSSDSSLQIISSDNSV 118

Query: 240 XXXXTRITTPVDDLDSKFDYMKAGLSLSNSDTKTSLNDFQINYYEAFITXXXXXXXXXXX 61
               TRITTPVDDLDSKFDYMKAGLSLSNSDTKTSLNDFQIN YEAFIT           
Sbjct: 119 SSTSTRITTPVDDLDSKFDYMKAGLSLSNSDTKTSLNDFQINDYEAFITKLEKQHQQHKE 178

Query: 60  XXXXXXXXXKTQLDKTKLD 4
                    KTQLDKTKLD
Sbjct: 179 ELEQLRKEHKTQLDKTKLD 197


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