BLASTX nr result

ID: Ophiopogon25_contig00046660 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00046660
         (567 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKU59957.1| hypothetical protein MA16_Dca028442 [Dendrobium c...    59   1e-08
gb|PKA61318.1| hypothetical protein AXF42_Ash006215 [Apostasia s...    53   7e-06

>gb|PKU59957.1| hypothetical protein MA16_Dca028442 [Dendrobium catenatum]
          Length = 56

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 30/54 (55%), Positives = 36/54 (66%), Gaps = 9/54 (16%)
 Frame = -1

Query: 405 ARPLEEV--WWPDE------VAGLLLEALPRGPVQPSGPSGCTHSPNNPGH-CP 271
           ARPLEEV  WW D+      + G LL+ LP+G   PSGPSGCTH+P+N G  CP
Sbjct: 3   ARPLEEVDSWWMDQEDNNNIINGFLLQILPKGQTTPSGPSGCTHNPDNHGGICP 56


>gb|PKA61318.1| hypothetical protein AXF42_Ash006215 [Apostasia shenzhenica]
          Length = 94

 Score = 52.8 bits (125), Expect = 7e-06
 Identities = 21/35 (60%), Positives = 28/35 (80%), Gaps = 1/35 (2%)
 Frame = -1

Query: 372 EVAGLLLEALPRGPVQPSGPSGCTHSPNNPGH-CP 271
           ++ G+LL++LP+GP  P GPSGCTH+PNN G  CP
Sbjct: 58  KIMGILLQSLPKGPTTPQGPSGCTHNPNNHGGICP 92


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