BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00046642
         (2455 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...  1086   0.0  
gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...  1083   0.0  
gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...  1083   0.0  
gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhiz...  1083   0.0  
dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhi...  1083   0.0  
gb|KFH65903.1| DNA-directed RNA polymerase II subunit A, variant...   570   e-179
gb|KFH65904.1| DNA-directed RNA polymerase II subunit A [Mortier...   570   e-178
gb|ORX66372.1| beta and beta-prime subunits of DNA dependent RNA...   557   e-174
gb|ORX62127.1| beta and beta-prime subunits of DNA dependent RNA...   554   e-174
gb|OBZ85268.1| DNA-directed RNA polymerase II subunit rpb1, part...   552   e-173
emb|CEI98631.1| Putative DNA-directed RNA polymerase (Fragment) ...   552   e-172
emb|CEG73711.1| Putative DNA-directed RNA polymerase (Fragment) ...   551   e-172
emb|CEP17467.1| hypothetical protein [Parasitella parasitica]         552   e-172
dbj|GAN09200.1| beta and beta-prime subunits of DNA dependent RN...   551   e-172
gb|EPB83723.1| DNA-directed RNA polymerase II subunit RPB1 [Muco...   551   e-172
gb|ORZ25825.1| hypothetical protein BCR42DRAFT_401008 [Absidia r...   547   e-171
emb|CDH50425.1| beta and beta-prime subunits of dna dependentrna...   549   e-171
gb|KDE09572.1| hypothetical protein MVLG_00467 [Microbotryum lyc...   533   e-171
emb|CDS13468.1| Putative DNA-directed RNA polymerase(Fragment) [...   548   e-171
emb|SAL97750.1| hypothetical protein [Absidia glauca]                 546   e-171

>gb|PKY37962.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1860

 Score = 1086 bits (2808), Expect = 0.0
 Identities = 548/586 (93%), Positives = 550/586 (93%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1109 EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1168

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR
Sbjct: 1169 AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 1228

Query: 363  EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 542
            EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN
Sbjct: 1229 EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 1288

Query: 543  DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 722
            DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV
Sbjct: 1289 DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 1348

Query: 723  YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 902
            YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG
Sbjct: 1349 YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 1408

Query: 903  IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1082
            IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC
Sbjct: 1409 IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1468

Query: 1083 SFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1262
            SFEETVEILMEAAAVGE+DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS
Sbjct: 1469 SFEETVEILMEAAAVGEIDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1528

Query: 1263 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXX 1442
            IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD         
Sbjct: 1529 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAF 1588

Query: 1443 XXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1622
                  VLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS
Sbjct: 1589 SPAFSPVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1648

Query: 1623 FXXXXXXXXXXXXXXXXXXXXGNFGGATMSASSTINASQSAYRQQA 1760
            F                    GNFGGATM+ASSTINASQS YRQQA
Sbjct: 1649 FTPQSPAYSPTSPSYSPSSPTGNFGGATMNASSTINASQSVYRQQA 1694



 Score = 65.9 bits (159), Expect = 4e-07
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +3

Query: 2118 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 2210
            NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1814 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1844


>gb|PKY17591.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1861

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 549/587 (93%), Positives = 551/587 (93%), Gaps = 1/587 (0%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1109 EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1168

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR
Sbjct: 1169 AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 1228

Query: 363  EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 542
            EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN
Sbjct: 1229 EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 1288

Query: 543  DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 722
            DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV
Sbjct: 1289 DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 1348

Query: 723  YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 902
            YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG
Sbjct: 1349 YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 1408

Query: 903  IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1082
            IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC
Sbjct: 1409 IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1468

Query: 1083 SFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1262
            SFEETVEILMEAAAVGE+DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS
Sbjct: 1469 SFEETVEILMEAAAVGEIDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1528

Query: 1263 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXX 1442
            IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD         
Sbjct: 1529 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAF 1588

Query: 1443 XXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1622
                  VLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS
Sbjct: 1589 SPAFSPVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1648

Query: 1623 FXXXXXXXXXXXXXXXXXXXXGNFGGATMSASSTINASQSAY-RQQA 1760
            F                    GNFGGATM+ASSTINASQSAY RQQA
Sbjct: 1649 FTPQSPAYSPTSPSYSPSSPTGNFGGATMNASSTINASQSAYNRQQA 1695



 Score = 65.9 bits (159), Expect = 4e-07
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +3

Query: 2118 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 2210
            NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1815 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1845


>gb|PKK78623.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1861

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 549/587 (93%), Positives = 551/587 (93%), Gaps = 1/587 (0%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1109 EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1168

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR
Sbjct: 1169 AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 1228

Query: 363  EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 542
            EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN
Sbjct: 1229 EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 1288

Query: 543  DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 722
            DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV
Sbjct: 1289 DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 1348

Query: 723  YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 902
            YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG
Sbjct: 1349 YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 1408

Query: 903  IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1082
            IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC
Sbjct: 1409 IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1468

Query: 1083 SFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1262
            SFEETVEILMEAAAVGE+DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS
Sbjct: 1469 SFEETVEILMEAAAVGEIDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1528

Query: 1263 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXX 1442
            IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD         
Sbjct: 1529 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAF 1588

Query: 1443 XXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1622
                  VLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS
Sbjct: 1589 SPAFSPVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1648

Query: 1623 FXXXXXXXXXXXXXXXXXXXXGNFGGATMSASSTINASQSAY-RQQA 1760
            F                    GNFGGATM+ASSTINASQSAY RQQA
Sbjct: 1649 FTPQSPAYSPTSPSYSPSSPTGNFGGATMNASSTINASQSAYNRQQA 1695



 Score = 65.9 bits (159), Expect = 4e-07
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +3

Query: 2118 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 2210
            NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1815 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1845


>gb|PKC14123.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
          Length = 1861

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 549/587 (93%), Positives = 551/587 (93%), Gaps = 1/587 (0%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1109 EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1168

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR
Sbjct: 1169 AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 1228

Query: 363  EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 542
            EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN
Sbjct: 1229 EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 1288

Query: 543  DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 722
            DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV
Sbjct: 1289 DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 1348

Query: 723  YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 902
            YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG
Sbjct: 1349 YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 1408

Query: 903  IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1082
            IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC
Sbjct: 1409 IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1468

Query: 1083 SFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1262
            SFEETVEILMEAAAVGE+DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS
Sbjct: 1469 SFEETVEILMEAAAVGEIDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1528

Query: 1263 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXX 1442
            IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD         
Sbjct: 1529 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAF 1588

Query: 1443 XXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1622
                  VLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS
Sbjct: 1589 SPAFSPVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1648

Query: 1623 FXXXXXXXXXXXXXXXXXXXXGNFGGATMSASSTINASQSAY-RQQA 1760
            F                    GNFGGATM+ASSTINASQSAY RQQA
Sbjct: 1649 FTPQSPAYSPTSPSYSPSSPTGNFGGATMNASSTINASQSAYNRQQA 1695



 Score = 65.9 bits (159), Expect = 4e-07
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +3

Query: 2118 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 2210
            NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1815 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1845


>dbj|GBC35266.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
            DAOM 181602]
 gb|PKC73289.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis]
 gb|POG69694.1| DNA-directed RNA polymerase II subunit RPB1 [Rhizophagus irregularis
            DAOM 181602=DAOM 197198]
          Length = 1861

 Score = 1083 bits (2800), Expect = 0.0
 Identities = 549/587 (93%), Positives = 551/587 (93%), Gaps = 1/587 (0%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1109 EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1168

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR
Sbjct: 1169 AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 1228

Query: 363  EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 542
            EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN
Sbjct: 1229 EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 1288

Query: 543  DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 722
            DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV
Sbjct: 1289 DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 1348

Query: 723  YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 902
            YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG
Sbjct: 1349 YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 1408

Query: 903  IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1082
            IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC
Sbjct: 1409 IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1468

Query: 1083 SFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1262
            SFEETVEILMEAAAVGE+DDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS
Sbjct: 1469 SFEETVEILMEAAAVGEIDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1528

Query: 1263 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXXX 1442
            IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYD         
Sbjct: 1529 IVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDSPGPSSPAF 1588

Query: 1443 XXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1622
                  VLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS
Sbjct: 1589 SPAFSPVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAPTAFAHSPGGSS 1648

Query: 1623 FXXXXXXXXXXXXXXXXXXXXGNFGGATMSASSTINASQSAY-RQQA 1760
            F                    GNFGGATM+ASSTINASQSAY RQQA
Sbjct: 1649 FTPQSPAYSPTSPSYSPSSPTGNFGGATMNASSTINASQSAYNRQQA 1695



 Score = 65.9 bits (159), Expect = 4e-07
 Identities = 31/31 (100%), Positives = 31/31 (100%)
 Frame = +3

Query: 2118 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 2210
            NYAPSGYSPSGINAATYSPNSLLSQSTINSN
Sbjct: 1815 NYAPSGYSPSGINAATYSPNSLLSQSTINSN 1845


>gb|KFH65903.1| DNA-directed RNA polymerase II subunit A, variant [Mortierella
            verticillata NRRL 6337]
          Length = 1794

 Score =  570 bits (1468), Expect = e-179
 Identities = 315/555 (56%), Positives = 386/555 (69%), Gaps = 14/555 (2%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EI  RF  ++V+PGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1045 EIGSRFAHAIVNPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1104

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            A NIKTPS++++L     ++++RAK++Q  +EYT LK VT  TEI Y+PD   T IE D+
Sbjct: 1105 ATNIKTPSLNVYLTPDCARNMERAKQVQVALEYTNLKKVTSSTEIHYDPDPENTNIEEDQ 1164

Query: 363  EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 542
            +FV+ YYAM D D  +   SPW+LR ELN  +MLDKKL M  V NKI E+F +D+  I +
Sbjct: 1165 DFVQAYYAMPDDDLHANRTSPWLLRIELNRKMMLDKKLTMADVSNKISEDFQRDLMCICS 1224

Query: 543  DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 722
            DDNA+  +IRCRIISE  + K    +E     EEDVFLK++E+++LS+IGLRGIK I+RV
Sbjct: 1225 DDNAEKLIIRCRIISEEAADKQTDVQE-----EEDVFLKKIESSLLSSIGLRGIKNIARV 1279

Query: 723  YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 902
            Y+++  K  IY+ + G    + EW LET G+NL+ V+  ++VD TRTYSNNC E+M VLG
Sbjct: 1280 YMVEKKK--IYIKNDGTFGSQMEWYLETSGSNLKAVMCEEDVDSTRTYSNNCGEVMSVLG 1337

Query: 903  IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1082
            IEA R ALLKELRGVIEFDGSYVNYRHL+LLCDVMT RGHLMAITRHGINRAETGALMRC
Sbjct: 1338 IEAARQALLKELRGVIEFDGSYVNYRHLSLLCDVMTHRGHLMAITRHGINRAETGALMRC 1397

Query: 1083 SFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1262
            SFEETVEILMEAAAVGE+DDCRGVAENIMLGQ+APLGTG+FD+ LD  +L T        
Sbjct: 1398 SFEETVEILMEAAAVGELDDCRGVAENIMLGQLAPLGTGEFDLMLDEKMLSTVVEGPRPG 1457

Query: 1263 IVKAKEGYDY-----RRSGNMTPALGGMTP----FTSARTPSHFAMTPMY--GAKTPLSS 1409
            ++    G          S  MTP   G +P    F+   +P     +PM   G+ +PL +
Sbjct: 1458 MMGMGMGMGMGLSSDNLSSQMTP-YDGRSPQYVDFSHPGSPMDAVFSPMVNSGSSSPLGA 1516

Query: 1410 YDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSP-YNTGSPSYGPTSPQYSPSSP- 1583
                                + G S S      Y TSP Y+  SPSY PTSP YSP+SP 
Sbjct: 1517 SSWSDPSSPFGATSPGYSPASPGYSPSSP---MYATSPGYSPTSPSYSPTSPNYSPTSPS 1573

Query: 1584 -APTAFAHSPGGSSF 1625
             +PT+ ++SP   S+
Sbjct: 1574 YSPTSPSYSPTSPSY 1588


>gb|KFH65904.1| DNA-directed RNA polymerase II subunit A [Mortierella verticillata
            NRRL 6337]
          Length = 1825

 Score =  570 bits (1468), Expect = e-178
 Identities = 315/555 (56%), Positives = 386/555 (69%), Gaps = 14/555 (2%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EI  RF  ++V+PGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1076 EIGSRFAHAIVNPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1135

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            A NIKTPS++++L     ++++RAK++Q  +EYT LK VT  TEI Y+PD   T IE D+
Sbjct: 1136 ATNIKTPSLNVYLTPDCARNMERAKQVQVALEYTNLKKVTSSTEIHYDPDPENTNIEEDQ 1195

Query: 363  EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 542
            +FV+ YYAM D D  +   SPW+LR ELN  +MLDKKL M  V NKI E+F +D+  I +
Sbjct: 1196 DFVQAYYAMPDDDLHANRTSPWLLRIELNRKMMLDKKLTMADVSNKISEDFQRDLMCICS 1255

Query: 543  DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 722
            DDNA+  +IRCRIISE  + K    +E     EEDVFLK++E+++LS+IGLRGIK I+RV
Sbjct: 1256 DDNAEKLIIRCRIISEEAADKQTDVQE-----EEDVFLKKIESSLLSSIGLRGIKNIARV 1310

Query: 723  YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 902
            Y+++  K  IY+ + G    + EW LET G+NL+ V+  ++VD TRTYSNNC E+M VLG
Sbjct: 1311 YMVEKKK--IYIKNDGTFGSQMEWYLETSGSNLKAVMCEEDVDSTRTYSNNCGEVMSVLG 1368

Query: 903  IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1082
            IEA R ALLKELRGVIEFDGSYVNYRHL+LLCDVMT RGHLMAITRHGINRAETGALMRC
Sbjct: 1369 IEAARQALLKELRGVIEFDGSYVNYRHLSLLCDVMTHRGHLMAITRHGINRAETGALMRC 1428

Query: 1083 SFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDSS 1262
            SFEETVEILMEAAAVGE+DDCRGVAENIMLGQ+APLGTG+FD+ LD  +L T        
Sbjct: 1429 SFEETVEILMEAAAVGELDDCRGVAENIMLGQLAPLGTGEFDLMLDEKMLSTVVEGPRPG 1488

Query: 1263 IVKAKEGYDY-----RRSGNMTPALGGMTP----FTSARTPSHFAMTPMY--GAKTPLSS 1409
            ++    G          S  MTP   G +P    F+   +P     +PM   G+ +PL +
Sbjct: 1489 MMGMGMGMGMGLSSDNLSSQMTP-YDGRSPQYVDFSHPGSPMDAVFSPMVNSGSSSPLGA 1547

Query: 1410 YDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSP-YNTGSPSYGPTSPQYSPSSP- 1583
                                + G S S      Y TSP Y+  SPSY PTSP YSP+SP 
Sbjct: 1548 SSWSDPSSPFGATSPGYSPASPGYSPSSP---MYATSPGYSPTSPSYSPTSPNYSPTSPS 1604

Query: 1584 -APTAFAHSPGGSSF 1625
             +PT+ ++SP   S+
Sbjct: 1605 YSPTSPSYSPTSPSY 1619


>gb|ORX66372.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
            [Linderina pennispora]
          Length = 1823

 Score =  557 bits (1436), Expect = e-174
 Identities = 311/560 (55%), Positives = 393/560 (70%), Gaps = 24/560 (4%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            E+E RF+RSLV+PGEMVG +AAQSIGEPATQMTLNTFH+AGVSSKNVTLGVPRLKE+INV
Sbjct: 1067 EVETRFKRSLVNPGEMVGVIAAQSIGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEVINV 1126

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            A NIKTPS+ +FL  +  ++++RAK++Q  IE+TTL  VT  TEIWY+PD+  T I+ DR
Sbjct: 1127 ATNIKTPSLTVFLTNEAGRNLERAKDVQVAIEHTTLAKVTAATEIWYDPDVQDTIIDEDR 1186

Query: 363  EFVELYYAMEDKDSISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIWN 542
            +FV+ YY M D+       SPW+LR ELN ++M+DKKL M  V NK+ E F++D+  I N
Sbjct: 1187 DFVQAYYEMPDEQIPVETISPWLLRIELNRNMMIDKKLSMTEVTNKLTEVFNRDLLCICN 1246

Query: 543  DDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISRV 722
            DDN++  V+RCRII+  G  KD  D E+G ++EEDVFLKR+E +ML N+ LRGI GI RV
Sbjct: 1247 DDNSEKLVVRCRIINAEGMNKDD-DLEDG-QMEEDVFLKRIETHMLDNVVLRGIPGIKRV 1304

Query: 723  YLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVLG 902
            YL++ +K  I   ++G   K+ EW +ETDG NL+EV+  DNVD  RTYSN+ +EI++VLG
Sbjct: 1305 YLVEKDK--IITKETGEYDKQTEWVIETDGINLREVMWQDNVDPKRTYSNHPIEILEVLG 1362

Query: 903  IEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMRC 1082
            IEA RAA+LKE+R VIEFDGSYVNYRHL+LL D+MTSRG L AITRHGINRAETG LMRC
Sbjct: 1363 IEAGRAAILKEVRNVIEFDGSYVNYRHLSLLVDLMTSRGILTAITRHGINRAETGPLMRC 1422

Query: 1083 SFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLR--------- 1235
            +FEETVEILM+AAAVG +DDCRGVAENI+LGQ+APLGTG FDV LD  +L          
Sbjct: 1423 TFEETVEILMDAAAVGAIDDCRGVAENILLGQLAPLGTGSFDVMLDDEMLSQVVIDPRAQ 1482

Query: 1236 ----TTAPAGDSSIVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPL 1403
                  AP+G  + V A        SG+M+P    MTP+ S R+P +  M    G  +P+
Sbjct: 1483 GFDLANAPSGVPAYVLAGSP---GPSGSMSPQ---MTPYDS-RSPDYVGMG---GPGSPV 1532

Query: 1404 SSYDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQ--------TSP-YNTGSPSYGPT 1556
            S+                 ++++G  S    G   Y         TSP YN  SPSY PT
Sbjct: 1533 SA-------------MFSPIVDSGATSPGWNGASPYSPASPSYSPTSPTYNATSPSYSPT 1579

Query: 1557 SPQYSPSSP--APTAFAHSP 1610
            SPQYSP+SP  +PT+ ++SP
Sbjct: 1580 SPQYSPTSPSYSPTSPSYSP 1599


>gb|ORX62127.1| beta and beta-prime subunits of DNA dependent RNA-polymerase
            [Hesseltinella vesiculosa]
          Length = 1674

 Score =  554 bits (1428), Expect = e-174
 Identities = 310/563 (55%), Positives = 390/563 (69%), Gaps = 22/563 (3%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIE RF  S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1009 EIENRFLTSIVNPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1068

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            A+NIKTP + ++L+ +  ++I+ AKE+Q  +E+TTL+ VT   EI+Y+PD   T IE D 
Sbjct: 1069 ARNIKTPRLEVWLEAERSRNIELAKEVQVRLEHTTLQKVTSSAEIYYDPDPRNTIIEEDV 1128

Query: 363  EFVELYYAMEDKDSISGYQ-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FV+ YY +ED ++ S  + SPW+LR ELN  +M+DK+L++  V  KI E F  D+H I 
Sbjct: 1129 DFVDTYYQLEDDNAASVTRVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFKNDLHIIG 1188

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +D+N++  VIRCR++S+    KD   +E   + EED FL+++E++MLS+I LRGI GI +
Sbjct: 1189 SDENSEKLVIRCRVMSDEQDDKDADGDEV--RTEEDTFLRKLESSMLSSINLRGIPGIRK 1246

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY++D  +  + L+D GL  + + W L+TDGTNLQ+V+  D VD TRTYSNN VEIM+VL
Sbjct: 1247 VYIVD--RREMTLNDQGLFDQNSIWGLDTDGTNLQQVMCQDGVDATRTYSNNPVEIMEVL 1304

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINR ETGALMR
Sbjct: 1305 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRTETGALMR 1364

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDS 1259
            CSFEETVEIL+EAAA GE+DDCRGVAENIMLGQ+APLGTG+FDV LD  +L+      DS
Sbjct: 1365 CSFEETVEILLEAAASGELDDCRGVAENIMLGQMAPLGTGEFDVMLDEDMLKLVPQ--DS 1422

Query: 1260 S----IVKAKEGYDYRRSGNMTPALGGMTP---------------FTSARTPSHFAMTPM 1382
                 +     G D+   G  TP  G MTP               F++  TPS    +PM
Sbjct: 1423 RHYPLMANGMAGADF--PGYATPNAGFMTPSMATPYDTRSPDWVDFSAPSTPSEPMFSPM 1480

Query: 1383 YGAKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSP 1562
              +    SS                    + G S S  G YS  +  Y+  SPSY P+SP
Sbjct: 1481 GNSGAASSS-----IGSSPWRGDLSPYAASPGYSPSSPG-YSPSSPSYSPSSPSYSPSSP 1534

Query: 1563 QYSPSSP--APTAFAHSPGGSSF 1625
             YSPSSP  +P++ ++SP   S+
Sbjct: 1535 SYSPSSPSYSPSSPSYSPSSPSY 1557


>gb|OBZ85268.1| DNA-directed RNA polymerase II subunit rpb1, partial [Choanephora
            cucurbitarum]
          Length = 1628

 Score =  552 bits (1422), Expect = e-173
 Identities = 306/564 (54%), Positives = 383/564 (67%), Gaps = 23/564 (4%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIE RF  S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1063 EIESRFLTSIVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1122

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ VT  TEI+Y+PD   T IE D 
Sbjct: 1123 AKNIKTPRLEVWLDSERSRNIELAKEVQVNLEHTTLQKVTSVTEIYYDPDPRNTVIEEDV 1182

Query: 363  EFVELYYAMEDKDSISGYQ-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FV+ YY +ED +S    + SPW+LR ELN  +M+DK+L++  V  KI E F  D+H I 
Sbjct: 1183 DFVDTYYQLEDDNSAFVTRVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFRNDLHVIG 1242

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +D+N++  ++RCR++ +    KD  DEE   + EED FL+++E +ML +I LRGI GI +
Sbjct: 1243 SDENSEKLIVRCRVMMDEHEDKDMDDEEG--RTEEDTFLRKLEASMLGSINLRGIPGIKK 1300

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L + G+ +   EW L+TDG NLQ+V+    VD TRTYSNN VEIM+VL
Sbjct: 1301 VYIVERKNTT--LTEKGVFETTTEWGLDTDGINLQQVMCQHGVDETRTYSNNTVEIMEVL 1358

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1359 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1418

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDS 1259
            CSFEETVEILMEAAAVGE+DDCRGVAENIMLGQ+APLGTG+FDV LD  +L++       
Sbjct: 1419 CSFEETVEILMEAAAVGELDDCRGVAENIMLGQMAPLGTGEFDVMLDEEMLQSVPQDHRQ 1478

Query: 1260 SIVKAKEGYDYRRSGNMTPALGGMTP---------------FTSARTPSHFAMTPM--YG 1388
            ++     G     +G  TP  G MTP               F+   +PS    +PM   G
Sbjct: 1479 NLQMGMAG---DTAGFATPGPGYMTPNMATPYDTRSPDWVDFSQPSSPSEPMFSPMGNSG 1535

Query: 1389 AKTPLSS---YDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTS 1559
            A   L+S    D                      S +    YS  +  Y+  SPSY PTS
Sbjct: 1536 AGGSLASPWRGDLSPYAQSPGYSPTSPGYSPSSPSYAASPGYSPASPNYSPTSPSYSPTS 1595

Query: 1560 PQYSPSSP--APTAFAHSPGGSSF 1625
            P YSP+SP  +PT+ ++SP   S+
Sbjct: 1596 PSYSPTSPSYSPTSPSYSPTSPSY 1619


>emb|CEI98631.1| Putative DNA-directed RNA polymerase (Fragment) [Rhizopus
            microsporus]
          Length = 1765

 Score =  552 bits (1423), Expect = e-172
 Identities = 307/563 (54%), Positives = 386/563 (68%), Gaps = 22/563 (3%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIE RF +S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1110 EIEARFLQSVVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1169

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ +T   EI+Y+PD   T I  D 
Sbjct: 1170 AKNIKTPRLEVWLDAERSRNIELAKEVQVKLEHTTLQKLTSVAEIYYDPDPRQTVIAEDV 1229

Query: 363  EFVELYYAMEDKDS-ISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FVE YY++ED +S      SPW+LR ELN  +M+DK +++  +  KI E F  D+H + 
Sbjct: 1230 DFVETYYSLEDDNSPFVTRVSPWLLRLELNRAMMVDKGIYVTDIVQKISEEFRHDLHVMG 1289

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +DDN++ +VIRCR++ +       ID+EN  K EED FL+++E++MLS+I L GI GI +
Sbjct: 1290 SDDNSEKQVIRCRVMLDENEKNAEIDDEN--KPEEDTFLRKLESSMLSSINLCGIPGIKK 1347

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L+D G  +   EW L+TDGTNLQEV+  + VD TRTYSNN VEIM+VL
Sbjct: 1348 VYIVERKNT--VLNDKGSFETTTEWGLDTDGTNLQEVMCQEGVDETRTYSNNTVEIMEVL 1405

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1406 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1465

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDS 1259
            CSFEETVEILMEAAAVGE+DDC+GVAENIMLGQ+APLGTG+FD+ LD  LL+T       
Sbjct: 1466 CSFEETVEILMEAAAVGELDDCKGVAENIMLGQMAPLGTGEFDIVLDEELLQTVPQDHRQ 1525

Query: 1260 SIVKAKEGYDYRRSGNMTPALGGMTP---------------FTSARTPSHFAMTPMYGAK 1394
            ++   + G     +G  TP  G MTP               F+   +PS     PM+   
Sbjct: 1526 NL---QMGITGDVAGFATPGPGYMTPGVATPYDTRSPDWVDFSQPSSPSE----PMF--- 1575

Query: 1395 TPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVG---GIYSYQTSP-YNTGSPSYGPTSP 1562
            +P+ +                     G    S G      SY  SP Y+  SPSY PTSP
Sbjct: 1576 SPMGNTGAAGIASPWRGDLSPYAQSPGYSPTSPGYSPSSPSYAASPGYSPASPSYSPTSP 1635

Query: 1563 QYSPSSP--APTAFAHSPGGSSF 1625
             YSP+SP  +PT+ ++SP   S+
Sbjct: 1636 SYSPTSPSYSPTSPSYSPTSPSY 1658



 Score =  162 bits (410), Expect = 4e-37
 Identities = 81/122 (66%), Positives = 99/122 (81%)
 Frame = +3

Query: 3   EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
           EIE RF +S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 602 EIEARFLQSVVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 661

Query: 183 AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
           AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ +T   EI+Y+PD   T I  D 
Sbjct: 662 AKNIKTPRLEVWLDAERSRNIELAKEVQVKLEHTTLQKLTSVAEIYYDPDPRQTVIAEDV 721

Query: 363 EF 368
            F
Sbjct: 722 GF 723


>emb|CEG73711.1| Putative DNA-directed RNA polymerase (Fragment) [Rhizopus
            microsporus]
          Length = 1692

 Score =  551 bits (1419), Expect = e-172
 Identities = 306/558 (54%), Positives = 384/558 (68%), Gaps = 22/558 (3%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIE RF +S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1063 EIEARFLQSVVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1122

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ +T   EI+Y+PD   T I  D 
Sbjct: 1123 AKNIKTPRLEVWLDAERSRNIELAKEVQVKLEHTTLQKLTSVAEIYYDPDPRQTVIAEDV 1182

Query: 363  EFVELYYAMEDKDS-ISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FVE YY++ED +S      SPW+LR ELN  +M+DK +++  +  KI E F  D+H + 
Sbjct: 1183 DFVETYYSLEDDNSPFVTRVSPWLLRLELNRAMMVDKGIYVTDIVQKISEEFRHDLHVMG 1242

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +DDN++ +VIRCR++ +       ID+EN  K EED FL+++E++MLS+I L GI GI +
Sbjct: 1243 SDDNSEKQVIRCRVMLDENEKNAEIDDEN--KPEEDTFLRKLESSMLSSINLCGIPGIKK 1300

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L+D G  +   EW L+TDGTNLQEV+  + VD TRTYSNN VEIM+VL
Sbjct: 1301 VYIVERKNT--VLNDKGSFETTTEWGLDTDGTNLQEVMCQEGVDETRTYSNNTVEIMEVL 1358

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1359 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1418

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDS 1259
            CSFEETVEILMEAAAVGE+DDC+GVAENIMLGQ+APLGTG+FD+ LD  LL+T       
Sbjct: 1419 CSFEETVEILMEAAAVGELDDCKGVAENIMLGQMAPLGTGEFDIVLDEELLQTVPQDHRQ 1478

Query: 1260 SIVKAKEGYDYRRSGNMTPALGGMTP---------------FTSARTPSHFAMTPMYGAK 1394
            ++   + G     +G  TP  G MTP               F+   +PS     PM+   
Sbjct: 1479 NL---QMGITGDVAGFATPGPGYMTPGVATPYDTRSPDWVDFSQPSSPSE----PMF--- 1528

Query: 1395 TPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVG---GIYSYQTSP-YNTGSPSYGPTSP 1562
            +P+ +                     G    S G      SY  SP Y+  SPSY PTSP
Sbjct: 1529 SPMGNTGAAGIASPWRGDLSPYAQSPGYSPTSPGYSPSSPSYAASPGYSPASPSYSPTSP 1588

Query: 1563 QYSPSSP--APTAFAHSP 1610
             YSP+SP  +PT+ ++SP
Sbjct: 1589 SYSPTSPSYSPTSPSYSP 1606


>emb|CEP17467.1| hypothetical protein [Parasitella parasitica]
          Length = 1768

 Score =  552 bits (1422), Expect = e-172
 Identities = 308/560 (55%), Positives = 384/560 (68%), Gaps = 19/560 (3%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIE RF  S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1064 EIESRFLTSIVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1123

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ VT  TEI+Y+PD   T IE D 
Sbjct: 1124 AKNIKTPRLEVWLDAERSRNIELAKEVQVNLEHTTLQKVTSVTEIYYDPDPRNTIIEEDA 1183

Query: 363  EFVELYYAMEDKDSISGYQ-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FV+ YY +ED +S    + SPW+LR ELN  +M+DK+L++  V  KI E F  D+H + 
Sbjct: 1184 DFVDTYYQLEDDNSAFVTRVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFRSDLHVMG 1243

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +D+N++  VIRCR++ +    KD +DEE+    EED FL+++E +ML +I LRGI GI +
Sbjct: 1244 SDENSEKLVIRCRVMMDENEDKD-MDEEDARS-EEDTFLRKLEASMLGSINLRGIPGIRK 1301

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L++ G  +   EW L+TDG NLQEV+    VD TRTYSNN VEIM+VL
Sbjct: 1302 VYIVERKNT--ILNEKGNFETTTEWGLDTDGINLQEVMCQYGVDETRTYSNNTVEIMEVL 1359

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1360 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1419

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDS 1259
            CSFEETVEILMEAAAVGE+DDCRGVAENIMLGQ+APLGTG+FDV LD  +L++       
Sbjct: 1420 CSFEETVEILMEAAAVGELDDCRGVAENIMLGQMAPLGTGEFDVMLDEEMLQSVPQDHRQ 1479

Query: 1260 SIVKAKEGYDYRRSGNMTPALGGMTP---------------FTSARTPSHFAMTPMYGAK 1394
            ++     G     +G  TP  G MTP               F+   +PS    +PM  + 
Sbjct: 1480 NLQMGVAG---DVAGFATPGPGYMTPNMATPYDTRSPDWVDFSQPSSPSEPMFSPMGNSG 1536

Query: 1395 TPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSP-YNTGSPSYGPTSPQYS 1571
            T  S                     + G S S     SY  SP Y+  SP+Y PTSP YS
Sbjct: 1537 TATSMASPWRGDLSPYAHSPGYSPTSPGYSPSSP---SYAASPGYSPASPNYSPTSPSYS 1593

Query: 1572 PSSP--APTAFAHSPGGSSF 1625
            P+SP  +PT+ ++SP   S+
Sbjct: 1594 PTSPSYSPTSPSYSPTSPSY 1613


>dbj|GAN09200.1| beta and beta-prime subunits of DNA dependent RNA-polymerase [Mucor
            ambiguus]
          Length = 1771

 Score =  551 bits (1419), Expect = e-172
 Identities = 308/564 (54%), Positives = 385/564 (68%), Gaps = 23/564 (4%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIE RF  S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1064 EIESRFLTSIVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1123

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ VT  TEI+Y+PD   T IE D 
Sbjct: 1124 AKNIKTPRLEVWLDAERSRNIELAKEVQVNLEHTTLQKVTSVTEIYYDPDPRNTIIEEDA 1183

Query: 363  EFVELYYAMEDKDSISGYQ-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FV+ YY +ED +S    + SPW+LR ELN  +M+DK+L++  V  KI E F  D+H + 
Sbjct: 1184 DFVDTYYQLEDDNSAFVTRVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFRSDLHVMG 1243

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +D+N++  VIRCR++ +    KD +DEE+    EED FL+++E +ML +I LRGI GI +
Sbjct: 1244 SDENSEKLVIRCRVMMDENEDKD-MDEEDARS-EEDTFLRKLEASMLGSINLRGIPGIRK 1301

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L++ G  +   EW L+TDG NLQEV+    VD TRTYSNN VEIM+VL
Sbjct: 1302 VYIVERKNT--ILNEKGNFETTTEWGLDTDGINLQEVMCQYGVDETRTYSNNTVEIMEVL 1359

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1360 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1419

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDS 1259
            CSFEETVEILMEAAAVGE+DDCRGVAENIMLGQ+APLGTG+FDV LD  +L++       
Sbjct: 1420 CSFEETVEILMEAAAVGELDDCRGVAENIMLGQMAPLGTGEFDVMLDEEMLQSVPQDHRQ 1479

Query: 1260 SIVKAKEGYDYRRSGNMTPALGGMTP---------------FTSARTPSHFAMTPM--YG 1388
            ++     G     +G  TP  G MTP               F+   +PS    +PM   G
Sbjct: 1480 NMQMGVAG---DVAGFATPGPGYMTPNMATPYDTRSPEWADFSQPSSPSEPMFSPMGNSG 1536

Query: 1389 AKTPLSS---YDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTS 1559
            A T ++S    D                      S +    YS  +  Y+  SPSY PTS
Sbjct: 1537 AATSIASPWRGDLSPYAQSPGYSPTSPGYSPSSPSYAASPGYSPASPNYSPTSPSYSPTS 1596

Query: 1560 PQYSPSSP--APTAFAHSPGGSSF 1625
            P YSP+SP  +PT+ ++SP   S+
Sbjct: 1597 PSYSPTSPSYSPTSPSYSPTSPSY 1620


>gb|EPB83723.1| DNA-directed RNA polymerase II subunit RPB1 [Mucor circinelloides f.
            circinelloides 1006PhL]
          Length = 1771

 Score =  551 bits (1419), Expect = e-172
 Identities = 308/564 (54%), Positives = 385/564 (68%), Gaps = 23/564 (4%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIE RF  S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1064 EIESRFLTSIVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1123

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ VT  TEI+Y+PD   T IE D 
Sbjct: 1124 AKNIKTPRLEVWLDAERSRNIELAKEVQVNLEHTTLQKVTSVTEIYYDPDPRNTIIEEDA 1183

Query: 363  EFVELYYAMEDKDSISGYQ-SPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FV+ YY +ED +S    + SPW+LR ELN  +M+DK+L++  V  KI E F  D+H + 
Sbjct: 1184 DFVDTYYQLEDDNSAFVTRVSPWLLRIELNRGMMIDKRLNITEVVQKISEEFRSDLHVMG 1243

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +D+N++  VIRCR++ +    KD +DEE+    EED FL+++E +ML +I LRGI GI +
Sbjct: 1244 SDENSEKLVIRCRVMMDENEDKD-MDEEDARS-EEDTFLRKLEASMLGSINLRGIPGIRK 1301

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L++ G  +   EW L+TDG NLQEV+    VD TRTYSNN VEIM+VL
Sbjct: 1302 VYIVERKNT--ILNEKGNFETTTEWGLDTDGINLQEVMCQYGVDETRTYSNNTVEIMEVL 1359

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1360 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1419

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDS 1259
            CSFEETVEILMEAAAVGE+DDCRGVAENIMLGQ+APLGTG+FDV LD  +L++       
Sbjct: 1420 CSFEETVEILMEAAAVGELDDCRGVAENIMLGQMAPLGTGEFDVMLDEEMLQSVPQDHRQ 1479

Query: 1260 SIVKAKEGYDYRRSGNMTPALGGMTP---------------FTSARTPSHFAMTPM--YG 1388
            ++     G     +G  TP  G MTP               F+   +PS    +PM   G
Sbjct: 1480 NMQMGVAG---DVAGFATPGPGYMTPNMATPYDTRSPDWVDFSQPSSPSEPMFSPMGNSG 1536

Query: 1389 AKTPLSS---YDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTS 1559
            A T ++S    D                      S +    YS  +  Y+  SPSY PTS
Sbjct: 1537 AATSIASPWRGDLSPYAQSPGYSPTSPGYSPSSPSYAASPGYSPASPNYSPTSPSYSPTS 1596

Query: 1560 PQYSPSSP--APTAFAHSPGGSSF 1625
            P YSP+SP  +PT+ ++SP   S+
Sbjct: 1597 PSYSPTSPSYSPTSPSYSPTSPSY 1620


>gb|ORZ25825.1| hypothetical protein BCR42DRAFT_401008 [Absidia repens]
          Length = 1633

 Score =  547 bits (1409), Expect = e-171
 Identities = 303/566 (53%), Positives = 386/566 (68%), Gaps = 25/566 (4%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            E+E RF  S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 986  EVESRFLTSVVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1045

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ VT  +EI+Y+PD  +T IE D 
Sbjct: 1046 AKNIKTPRLEVWLDAERSRNIELAKEVQVHLEHTTLQKVTSASEIYYDPDPRSTIIEEDA 1105

Query: 363  EFVELYYAMEDKDS-ISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FV+ YY +ED +S +    SPW+LR ELN  +M+DK+L++  V  KI + F  D+H I 
Sbjct: 1106 DFVDTYYQLEDDNSPVVTRVSPWLLRIELNRGMMIDKRLNITEVVQKISDEFKNDLHVIG 1165

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +D+N++  +IRCR++S+    KD  DE+   + EED FL+++E++MLS+I LRGI  I +
Sbjct: 1166 SDENSEKLIIRCRVMSDESEEKDMDDEDT--RTEEDTFLRKLESSMLSSINLRGIPRIQK 1223

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L+  G  ++  EW L+TDG NLQ+V+    VD  RTYSNN  EIM+VL
Sbjct: 1224 VYIVERKDT--ILNSQGKFEQTTEWGLDTDGINLQQVMCQHGVDERRTYSNNTTEIMEVL 1281

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1282 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1341

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDS 1259
            CSFEETVEILMEAAAVGE+DDCRGVAENIMLGQ+APLGTG+FDV LD  +L++       
Sbjct: 1342 CSFEETVEILMEAAAVGELDDCRGVAENIMLGQMAPLGTGEFDVILDEEMLKSVPENQRH 1401

Query: 1260 SIVKAKEGYDYRRSGNMTPALGGMTP---------------FTSARTPSHFAMTPM---- 1382
             ++    G     +G  TP  G MTP               F++  TPS    +PM    
Sbjct: 1402 HLM--PNGVPGDVAGFATPGPGFMTPSMATPYDTRSPDWVDFSAPSTPSEPMFSPMGNSG 1459

Query: 1383 -YGAKTPLSSY--DXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGP 1553
              GA    S +  D                  + G S S    YS  +  Y+  SPSY P
Sbjct: 1460 AVGATIGASPWRSDLSPYASSPGYSPSSPFAASPGYSPS-SPSYSPSSPSYSPSSPSYSP 1518

Query: 1554 TSPQYSPSSP--APTAFAHSPGGSSF 1625
            +SP YSPSSP  +P++ ++SP   S+
Sbjct: 1519 SSPSYSPSSPSYSPSSPSYSPSSPSY 1544


>emb|CDH50425.1| beta and beta-prime subunits of dna dependentrna-polymerase
            [Lichtheimia corymbifera JMRC:FSU:9682]
          Length = 1774

 Score =  549 bits (1415), Expect = e-171
 Identities = 309/562 (54%), Positives = 386/562 (68%), Gaps = 21/562 (3%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIE RFQ ++V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1064 EIESRFQTAMVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1123

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ VT RTEI+Y+PD   T IE D 
Sbjct: 1124 AKNIKTPRLEVWLDAERSRNIELAKEVQVHLEHTTLQKVTARTEIFYDPDPRNTIIEEDA 1183

Query: 363  EFVELYYAMEDKDS-ISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FV+ YY +ED +S +    SPW+LR EL+  +M+DK+L++  V  +I E F  D+H I 
Sbjct: 1184 DFVDTYYQLEDDNSPVVTRVSPWLLRIELDRGMMVDKRLNITEVVQRISEEFKSDLHVIG 1243

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +DDN++  +IRCR++ +    K  +DE+ G + EED FL+++E +MLS+I LRGI  I +
Sbjct: 1244 SDDNSEKLIIRCRVMMDENEEKG-MDEDEG-RAEEDTFLRKLETSMLSSINLRGIPRIQK 1301

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L+ +G      EW L+TDG NLQ+V+    VD  RTYSNN VEIM+VL
Sbjct: 1302 VYIVERKDTR--LNANGNFDTVTEWGLDTDGINLQQVMCQRGVDERRTYSNNTVEIMEVL 1359

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1360 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1419

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRT------- 1238
            CSFEETVEIL+EAAAVGE+DDCRGVAENIMLGQ+APLGTG+FDV LD  +L+T       
Sbjct: 1420 CSFEETVEILLEAAAVGELDDCRGVAENIMLGQLAPLGTGEFDVMLDEDMLKTIPHDNRQ 1479

Query: 1239 TAPAGDSSIVKAKEGYDYRRSGNMTPALG--------GMTPFTSARTPSHFAMTPM--YG 1388
            T P G    V    G+     G MTP LG            F+   +PS    +PM   G
Sbjct: 1480 TMPNGVPGDV---GGFTTPGPGYMTPNLGTPYDTRSPDWVDFSHPSSPSEPMFSPMGNTG 1536

Query: 1389 AKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSP-YNTGSPSYGPTSPQ 1565
            A +P  +                     G    S     SY TSP Y+  SP+Y PTSP 
Sbjct: 1537 AASPSGASPWRGDLSPYAASPGYSPTSPGYSPSSP----SYITSPGYSPASPNYSPTSPS 1592

Query: 1566 YSPSSP--APTAFAHSPGGSSF 1625
            YSP+SP  +PT+ ++SP   S+
Sbjct: 1593 YSPTSPSYSPTSPSYSPTSPSY 1614


>gb|KDE09572.1| hypothetical protein MVLG_00467 [Microbotryum lychnidis-dioicae p1A1
            Lamole]
          Length = 1097

 Score =  533 bits (1372), Expect = e-171
 Identities = 295/548 (53%), Positives = 370/548 (67%), Gaps = 11/548 (2%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            E+E +F+ SL +PGEM GT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 375  EVESKFKASLAAPGEMCGTLAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 434

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            A N+KTPS+ ++L+ +  +DID AKE+Q  + YTTLKT+T  TEI Y+P++ TT I  D 
Sbjct: 435  AVNLKTPSMTVYLQPEIARDIDLAKEVQTMLSYTTLKTITASTEIIYDPEVNTTVITDDI 494

Query: 363  EFVELYYAMEDKDSISGY--QSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAI 536
            EFVE ++A+ D+D  +    QSPW+LRFEL+   MLDKKL M  V  KI E F +D+  I
Sbjct: 495  EFVEAFFAIPDEDVEANLHRQSPWLLRFELDRAKMLDKKLEMSFVAGKIAEVFEQDLFVI 554

Query: 537  WNDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGIS 716
            W++DNA+  VIRCR ++E G  K+   EE     EED+FLK++E +MLS I LRG++GI 
Sbjct: 555  WSEDNAEKLVIRCRALNEEGRDKEDGAEE-AEDAEEDIFLKQLEASMLSTISLRGVEGIE 613

Query: 717  RVYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQV 896
            RV+++   +  I   +SG      EW LETDG NL++VL  D VD TRT SN+CVE++QV
Sbjct: 614  RVFMLQHKRNVI--TESGEFDNPTEWVLETDGINLRKVLCVDGVDPTRTVSNSCVEVLQV 671

Query: 897  LGIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALM 1076
            LGIEA RA++L+ELR VIEFDGS VNYRHL++L D+MT+RG LMAITRHGINR++TGALM
Sbjct: 672  LGIEAARASVLRELRNVIEFDGSRVNYRHLSMLTDIMTNRGSLMAITRHGINRSDTGALM 731

Query: 1077 RCSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGD 1256
            RCSFEETVEIL EAAA GE+D C GVAENI+LGQVAP+GTG F++ LD  +L+      D
Sbjct: 732  RCSFEETVEILFEAAATGEIDYCTGVAENILLGQVAPMGTGAFELSLDMEMLKEVVI--D 789

Query: 1257 SSIVKAKEGYDYRRSGNMTPALGGMTPFTSA---RTPSHFAM------TPMYGAKTPLSS 1409
              +  A     Y   G +TP  GGMTP+  A   RTP H  M      +P+Y +    + 
Sbjct: 790  HRLPMAGMN-AYGNDGGLTPGGGGMTPYADANDSRTPMHVPMDGLANFSPLYDSS---AG 845

Query: 1410 YDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSPYNTGSPSYGPTSPQYSPSSPAP 1589
            YD                 + GG +   GG     +  Y   SP  G  SP YSPSSP P
Sbjct: 846  YD-----------------QGGGLTPIYGG----ASPAYGGASPFGGGASPGYSPSSPFP 884

Query: 1590 TAFAHSPG 1613
                 SPG
Sbjct: 885  GYSPVSPG 892


>emb|CDS13468.1| Putative DNA-directed RNA polymerase(Fragment) [Lichtheimia ramosa]
          Length = 1743

 Score =  548 bits (1411), Expect = e-171
 Identities = 307/562 (54%), Positives = 384/562 (68%), Gaps = 21/562 (3%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            E+E RFQ ++V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1033 EVESRFQTAMVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1092

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ VT RTEI+Y+PD   T IE D 
Sbjct: 1093 AKNIKTPRLEVWLDAERSRNIELAKEVQVHLEHTTLQKVTARTEIFYDPDPRNTIIEEDA 1152

Query: 363  EFVELYYAMEDKDS-ISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            +FV+ YY +ED +S +    SPW+LR EL+  +M+DK+L++  V  +I E F  D+H I 
Sbjct: 1153 DFVDTYYQLEDDNSPVVTRVSPWLLRIELDRGMMVDKRLNITEVVQRISEEFKSDLHVIG 1212

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +DDN++  +IRCR++ +    K    EE+  + EED FL+++E +MLS+I LRGI  I +
Sbjct: 1213 SDDNSEKLIIRCRVMMDENEEKGM--EEDEGRAEEDTFLRKLETSMLSSINLRGIPRIQK 1270

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L+ +G      EW L+TDG NLQ+V+    VD  RTYSNN VEIM+VL
Sbjct: 1271 VYIVERKDTR--LNANGNFDTVTEWGLDTDGINLQQVMCQRGVDERRTYSNNTVEIMEVL 1328

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1329 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1388

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRT------- 1238
            CSFEETVEIL+EAAAVGE+DDCRGVAENIMLGQ+APLGTG+FDV LD  +L+T       
Sbjct: 1389 CSFEETVEILLEAAAVGELDDCRGVAENIMLGQLAPLGTGEFDVMLDEDMLKTIPHDNRQ 1448

Query: 1239 TAPAGDSSIVKAKEGYDYRRSGNMTPALG--------GMTPFTSARTPSHFAMTPM--YG 1388
            T P G    V    G+     G MTP LG            F+   +PS    +PM   G
Sbjct: 1449 TMPNGVPGDV---AGFTTPGPGYMTPNLGTPYDTRSPDWVDFSHPSSPSEPMFSPMGNTG 1505

Query: 1389 AKTPLSSYDXXXXXXXXXXXXXXXVLEAGGKSVSVGGIYSYQTSP-YNTGSPSYGPTSPQ 1565
            A +P  +                     G    S     SY TSP Y+  SP+Y PTSP 
Sbjct: 1506 AASPSGASPWRGDLSPYAASPGYSPTSPGYSPSSP----SYITSPGYSPASPNYSPTSPS 1561

Query: 1566 YSPSSP--APTAFAHSPGGSSF 1625
            YSP+SP  +PT+ ++SP   S+
Sbjct: 1562 YSPTSPSYSPTSPSYSPTSPSY 1583


>emb|SAL97750.1| hypothetical protein [Absidia glauca]
          Length = 1682

 Score =  546 bits (1407), Expect = e-171
 Identities = 301/547 (55%), Positives = 372/547 (68%), Gaps = 20/547 (3%)
 Frame = +3

Query: 3    EIELRFQRSLVSPGEMVGTVAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 182
            EIE RF  S+V+PGEMVGT+AAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV
Sbjct: 1083 EIESRFLTSIVAPGEMVGTIAAQSIGEPATQMTLNTFHYAGVSSKNVTLGVPRLKEIINV 1142

Query: 183  AKNIKTPSVHIFLKEQYKKDIDRAKEIQATIEYTTLKTVTQRTEIWYEPDITTTEIESDR 362
            AKNIKTP + ++L  +  ++I+ AKE+Q  +E+TTL+ VT  +EI+Y+PD  +T IE D 
Sbjct: 1143 AKNIKTPRLEVWLDAERSRNIELAKEVQVHLEHTTLQKVTSASEIYYDPDPRSTIIEEDT 1202

Query: 363  EFVELYYAMEDKDS-ISGYQSPWVLRFELNHDVMLDKKLHMDIVGNKIQENFSKDIHAIW 539
            EFV+ YY +ED +S      SPW+LR ELN  +M+DK+L++  V  KI + F  D+H I 
Sbjct: 1203 EFVDTYYQLEDDNSPFVTRVSPWLLRIELNRGMMIDKRLNITEVVQKISDEFKNDLHVIG 1262

Query: 540  NDDNADLKVIRCRIISEPGSTKDHIDEENGHKIEEDVFLKRVENNMLSNIGLRGIKGISR 719
            +D+N++  +IRCR++S+    KD  DE+   K EED FL+++E++MLS+I LRGI  I +
Sbjct: 1263 SDENSEKLIIRCRVMSDENEEKDMDDEDT--KTEEDTFLRKLESSMLSSINLRGIPRIQK 1320

Query: 720  VYLIDSNKTHIYLDDSGLIQKENEWTLETDGTNLQEVLNADNVDHTRTYSNNCVEIMQVL 899
            VY+++   T   L+  G  ++  EW L+TDG NLQ+V+    VD  RTYSNN VEIM+VL
Sbjct: 1321 VYIVERKDT--ILNSQGKFEQTTEWGLDTDGINLQQVMCQHGVDERRTYSNNTVEIMEVL 1378

Query: 900  GIEATRAALLKELRGVIEFDGSYVNYRHLALLCDVMTSRGHLMAITRHGINRAETGALMR 1079
            GIEATR ALLKELR VIEFDGSYVNYRHLALLCDVMT+RGHLMAITRHGINRAETGALMR
Sbjct: 1379 GIEATRKALLKELRNVIEFDGSYVNYRHLALLCDVMTNRGHLMAITRHGINRAETGALMR 1438

Query: 1080 CSFEETVEILMEAAAVGEVDDCRGVAENIMLGQVAPLGTGDFDVYLDPILLRTTAPAGDS 1259
            CSFEETVEILMEAAAVGE+DDCRGVAENIMLGQ+APLGTG+FDV LD  +L+T       
Sbjct: 1439 CSFEETVEILMEAAAVGELDDCRGVAENIMLGQMAPLGTGEFDVILDEEMLKTVPENQRH 1498

Query: 1260 SIVKAKEGYDYRRSGNMTPALGGMTPFTSARTPSHFAMTPMYGAKTPLSSYDXXXXXXXX 1439
             ++    G     +G  TP  G MTP  S  TP             P S  +        
Sbjct: 1499 HLI--PNGVSGDIAGFATPGPGFMTP--SMATPYDTRSPDWVDFSAPSSPSEPMFSPMG- 1553

Query: 1440 XXXXXXXVLEAGGKSVSVGG------IYSYQTSP-------------YNTGSPSYGPTSP 1562
                      +GG   S+G       +  Y +SP             Y+  SPSY P+SP
Sbjct: 1554 ---------NSGGVGASIGASPWRSDLSPYASSPGYSPSTPFAASPGYSPSSPSYSPSSP 1604

Query: 1563 QYSPSSP 1583
             YSPSSP
Sbjct: 1605 SYSPSSP 1611