BLASTX nr result

ID: Ophiopogon25_contig00046629 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00046629
         (1063 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EXX60580.1| Tim23p [Rhizophagus irregularis DAOM 197198w] >gi...    77   8e-14
gb|EXX60581.1| Tim23p [Rhizophagus irregularis DAOM 197198w]           77   8e-14
gb|EXX60583.1| Tim23p [Rhizophagus irregularis DAOM 197198w]           69   2e-11
gb|EXX60582.1| Tim23p [Rhizophagus irregularis DAOM 197198w]           68   4e-11

>gb|EXX60580.1| Tim23p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC35897.1| Mitochondrial import inner membrane translocase subunit TIM23
           [Rhizophagus irregularis DAOM 181602]
 gb|PKC05241.1| putative mitochondrial import inner membrane translocase subunit
           TIM23 [Rhizophagus irregularis]
 gb|PKC69244.1| putative mitochondrial import inner membrane translocase subunit
           TIM23 [Rhizophagus irregularis]
 gb|PKK67073.1| putative mitochondrial import inner membrane translocase subunit
           TIM23 [Rhizophagus irregularis]
 gb|PKY25119.1| putative mitochondrial import inner membrane translocase subunit
           TIM23 [Rhizophagus irregularis]
 gb|PKY47761.1| putative mitochondrial import inner membrane translocase subunit
           TIM23 [Rhizophagus irregularis]
 gb|POG60200.1| putative mitochondrial import inner membrane translocase subunit
           TIM23 [Rhizophagus irregularis DAOM 181602=DAOM 197198]
          Length = 195

 Score = 77.0 bits (188), Expect(2) = 8e-14
 Identities = 53/100 (53%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
 Frame = -2

Query: 594 REIAGFSANGYLKLDRRVVTLRTLSSLGTL--MIYGSML*YRNESXXXXXXXXXXXLMKG 421
           REIAG  A  YL+LD +VVT   L S G    + YG+   Y               LM+G
Sbjct: 40  REIAGLGAVDYLRLDEQVVTPGALPSRGGFDDLCYGTGTTY----LAGLTFGGVWGLMEG 95

Query: 420 LHGHFISSNFKLRLNTILNFVT*RGPFI*NYGGILAVGYN 301
           LHGH  S NFKLRLNTILN VT RGPFI N  GILA+GYN
Sbjct: 96  LHGH--SPNFKLRLNTILNSVTRRGPFIGNSCGILAMGYN 133



 Score = 29.6 bits (65), Expect(2) = 8e-14
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 694 SYKSQKWSLPNFIKSIGIDLVTVSDFLVRMNLGQRNCR 581
           S+ S  +   +     G D V VSDFL R+NLG    R
Sbjct: 3   SFSSNTYDYQSSPNQFGTDPVAVSDFLARVNLGPGQLR 40


>gb|EXX60581.1| Tim23p [Rhizophagus irregularis DAOM 197198w]
          Length = 173

 Score = 77.0 bits (188), Expect(2) = 8e-14
 Identities = 53/100 (53%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
 Frame = -2

Query: 594 REIAGFSANGYLKLDRRVVTLRTLSSLGTL--MIYGSML*YRNESXXXXXXXXXXXLMKG 421
           REIAG  A  YL+LD +VVT   L S G    + YG+   Y               LM+G
Sbjct: 40  REIAGLGAVDYLRLDEQVVTPGALPSRGGFDDLCYGTGTTY----LAGLTFGGVWGLMEG 95

Query: 420 LHGHFISSNFKLRLNTILNFVT*RGPFI*NYGGILAVGYN 301
           LHGH  S NFKLRLNTILN VT RGPFI N  GILA+GYN
Sbjct: 96  LHGH--SPNFKLRLNTILNSVTRRGPFIGNSCGILAMGYN 133



 Score = 29.6 bits (65), Expect(2) = 8e-14
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 694 SYKSQKWSLPNFIKSIGIDLVTVSDFLVRMNLGQRNCR 581
           S+ S  +   +     G D V VSDFL R+NLG    R
Sbjct: 3   SFSSNTYDYQSSPNQFGTDPVAVSDFLARVNLGPGQLR 40


>gb|EXX60583.1| Tim23p [Rhizophagus irregularis DAOM 197198w]
          Length = 136

 Score = 69.3 bits (168), Expect(2) = 2e-11
 Identities = 49/100 (49%), Positives = 57/100 (57%), Gaps = 2/100 (2%)
 Frame = -2

Query: 594 REIAGFSANGYLKLDRRVVTLRTLSSLGTL--MIYGSML*YRNESXXXXXXXXXXXLMKG 421
           REIAG  A  YL+LD +VVT   L S G    + YG+   Y               LM+G
Sbjct: 40  REIAGLGAVDYLRLDEQVVTPGALPSRGGFDDLCYGTGTTY----LAGLTFGGVWGLMEG 95

Query: 420 LHGHFISSNFKLRLNTILNFVT*RGPFI*NYGGILAVGYN 301
           LHGH  S NFKLRLNTILN VT RGPFI N  GIL + ++
Sbjct: 96  LHGH--SPNFKLRLNTILNSVTRRGPFIGNSCGILGIYFS 133



 Score = 29.6 bits (65), Expect(2) = 2e-11
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 694 SYKSQKWSLPNFIKSIGIDLVTVSDFLVRMNLGQRNCR 581
           S+ S  +   +     G D V VSDFL R+NLG    R
Sbjct: 3   SFSSNTYDYQSSPNQFGTDPVAVSDFLARVNLGPGQLR 40


>gb|EXX60582.1| Tim23p [Rhizophagus irregularis DAOM 197198w]
          Length = 129

 Score = 67.8 bits (164), Expect(2) = 4e-11
 Identities = 49/95 (51%), Positives = 54/95 (56%), Gaps = 2/95 (2%)
 Frame = -2

Query: 594 REIAGFSANGYLKLDRRVVTLRTLSSLGTL--MIYGSML*YRNESXXXXXXXXXXXLMKG 421
           REIAG  A  YL+LD +VVT   L S G    + YG+   Y               LM+G
Sbjct: 40  REIAGLGAVDYLRLDEQVVTPGALPSRGGFDDLCYGTGTTY----LAGLTFGGVWGLMEG 95

Query: 420 LHGHFISSNFKLRLNTILNFVT*RGPFI*NYGGIL 316
           LHGH  S NFKLRLNTILN VT RGPFI N  GIL
Sbjct: 96  LHGH--SPNFKLRLNTILNSVTRRGPFIGNSCGIL 128



 Score = 29.6 bits (65), Expect(2) = 4e-11
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = -1

Query: 694 SYKSQKWSLPNFIKSIGIDLVTVSDFLVRMNLGQRNCR 581
           S+ S  +   +     G D V VSDFL R+NLG    R
Sbjct: 3   SFSSNTYDYQSSPNQFGTDPVAVSDFLARVNLGPGQLR 40


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