BLASTX nr result

ID: Ophiopogon25_contig00046628 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00046628
         (412 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKK78530.1| hypothetical protein RhiirC2_519463 [Rhizophagus ...    83   1e-17
gb|PKC64637.1| hypothetical protein RhiirA1_421385 [Rhizophagus ...    86   1e-16
gb|EXX61177.1| Msl5p [Rhizophagus irregularis DAOM 197198w] >gi|...    86   1e-16
dbj|GBC42650.1| Splicing factor 1 [Rhizophagus irregularis DAOM ...    86   1e-16
gb|EXX61176.1| Msl5p [Rhizophagus irregularis DAOM 197198w] >gi|...    86   1e-16

>gb|PKK78530.1| hypothetical protein RhiirC2_519463 [Rhizophagus irregularis]
          Length = 145

 Score = 83.2 bits (204), Expect = 1e-17
 Identities = 41/62 (66%), Positives = 47/62 (75%), Gaps = 2/62 (3%)
 Frame = -2

Query: 234 NKIFLHHQDWVMLHRLRDYRQLLHLGVRQNLLI--HHLHQDLLCTPLLLMFPCILRLLLQ 61
           ++IF H QDWV  H LRD +QLLH G+ QNLL+  HH HQDLLC  LL MFPCIL LLLQ
Sbjct: 8   SQIFHHRQDWVTPHLLRDCQQLLHPGILQNLLLIHHHHHQDLLCILLLQMFPCILHLLLQ 67

Query: 60  HR 55
           H+
Sbjct: 68  HQ 69


>gb|PKC64637.1| hypothetical protein RhiirA1_421385 [Rhizophagus irregularis]
          Length = 476

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 4/59 (6%)
 Frame = -1

Query: 412 NVDASRSNEPGVKVGHYGPTGGTKPPWAT---AGSPTAPPWASKP-IAVPSAHSGASTL 248
           NV++SRSN+PG+KVGHYGP GG+KPPWA+    GSPTAPPWASKP +   +AH G + L
Sbjct: 286 NVESSRSNDPGIKVGHYGPAGGSKPPWASHSALGSPTAPPWASKPAVTASNAHPGTNAL 344


>gb|EXX61177.1| Msl5p [Rhizophagus irregularis DAOM 197198w]
 gb|PKC07934.1| hypothetical protein RhiirA5_358575 [Rhizophagus irregularis]
          Length = 476

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 4/59 (6%)
 Frame = -1

Query: 412 NVDASRSNEPGVKVGHYGPTGGTKPPWAT---AGSPTAPPWASKP-IAVPSAHSGASTL 248
           NV++SRSN+PG+KVGHYGP GG+KPPWA+    GSPTAPPWASKP +   +AH G + L
Sbjct: 286 NVESSRSNDPGIKVGHYGPAGGSKPPWASHSALGSPTAPPWASKPAVTASNAHPGTNAL 344


>dbj|GBC42650.1| Splicing factor 1 [Rhizophagus irregularis DAOM 181602]
          Length = 561

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 4/59 (6%)
 Frame = -1

Query: 412 NVDASRSNEPGVKVGHYGPTGGTKPPWAT---AGSPTAPPWASKP-IAVPSAHSGASTL 248
           NV++SRSN+PG+KVGHYGP GG+KPPWA+    GSPTAPPWASKP +   +AH G + L
Sbjct: 373 NVESSRSNDPGIKVGHYGPAGGSKPPWASHSALGSPTAPPWASKPAVTASNAHPGTNAL 431


>gb|EXX61176.1| Msl5p [Rhizophagus irregularis DAOM 197198w]
 dbj|GBC42649.1| splicing branch point binding protein [Rhizophagus irregularis DAOM
           181602]
 gb|POG62663.1| hypothetical protein GLOIN_2v1693855 [Rhizophagus irregularis DAOM
           181602=DAOM 197198]
          Length = 563

 Score = 85.5 bits (210), Expect = 1e-16
 Identities = 38/59 (64%), Positives = 47/59 (79%), Gaps = 4/59 (6%)
 Frame = -1

Query: 412 NVDASRSNEPGVKVGHYGPTGGTKPPWAT---AGSPTAPPWASKP-IAVPSAHSGASTL 248
           NV++SRSN+PG+KVGHYGP GG+KPPWA+    GSPTAPPWASKP +   +AH G + L
Sbjct: 373 NVESSRSNDPGIKVGHYGPAGGSKPPWASHSALGSPTAPPWASKPAVTASNAHPGTNAL 431


Top