BLASTX nr result

ID: Ophiopogon25_contig00046625 seq

BLASTX 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Ophiopogon25_contig00046625
         (479 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           149,584,005 sequences; 54,822,741,787 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|PKY41165.1| DEAD-domain-containing protein [Rhizophagus irreg...   101   6e-22
gb|PKK73903.1| DEAD-domain-containing protein [Rhizophagus irreg...   101   6e-22
dbj|GBC26264.1| ATP-dependent RNA helicase DDX42 [Rhizophagus ir...   101   6e-22
gb|PKY17543.1| DEAD-domain-containing protein [Rhizophagus irreg...    71   3e-11

>gb|PKY41165.1| DEAD-domain-containing protein [Rhizophagus irregularis]
          Length = 792

 Score =  101 bits (252), Expect = 6e-22
 Identities = 74/152 (48%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
 Frame = -1

Query: 479  FAGDLVRNLESSGKVVPSSLMDLAMQNAKFRKSRQMIXXXXXXXXXXXXXXXXXXXXXXX 300
            FAGDLVRNLESSG+VVPSSLMDLAMQNA+FRKSRQMI                       
Sbjct: 645  FAGDLVRNLESSGQVVPSSLMDLAMQNARFRKSRQMIRGGRGRSGRSGRGRGRSRGGRGS 704

Query: 299  XXXSNXXXXXXXXXXXXXXXXXIPPPPQLSTSNRSGRS-NMSGF--KFQMKFQKASSAXX 129
               SN                 IPPPPQLS S++S RS NM GF  KFQM FQKASSA  
Sbjct: 705  GSSSN---AIPLGSGRAGGGAQIPPPPQLSASSKSDRSNNMGGFQSKFQMNFQKASSA-E 760

Query: 128  XXXXXXXXXXXXXXXXXXXXSKDPQRKRRWDS 33
                                S+D QRKRRWDS
Sbjct: 761  SELGLLRSSNTGSSSTSKSSSRDQQRKRRWDS 792


>gb|PKK73903.1| DEAD-domain-containing protein [Rhizophagus irregularis]
          Length = 792

 Score =  101 bits (252), Expect = 6e-22
 Identities = 74/152 (48%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
 Frame = -1

Query: 479  FAGDLVRNLESSGKVVPSSLMDLAMQNAKFRKSRQMIXXXXXXXXXXXXXXXXXXXXXXX 300
            FAGDLVRNLESSG+VVPSSLMDLAMQNA+FRKSRQMI                       
Sbjct: 645  FAGDLVRNLESSGQVVPSSLMDLAMQNARFRKSRQMIRGGRGRSGRSGRGRGRGRGGRGS 704

Query: 299  XXXSNXXXXXXXXXXXXXXXXXIPPPPQLSTSNRSGRS-NMSGF--KFQMKFQKASSAXX 129
               SN                 IPPPPQLS S++S RS NM GF  KFQM FQKASSA  
Sbjct: 705  GSSSN---AIPLGSGRAGGGAQIPPPPQLSASSKSDRSNNMGGFQSKFQMNFQKASSA-E 760

Query: 128  XXXXXXXXXXXXXXXXXXXXSKDPQRKRRWDS 33
                                S+D QRKRRWDS
Sbjct: 761  SELGLLRSSNTGSSSTSKSSSRDQQRKRRWDS 792


>dbj|GBC26264.1| ATP-dependent RNA helicase DDX42 [Rhizophagus irregularis DAOM
            181602]
 gb|PKC14374.1| DEAD-domain-containing protein [Rhizophagus irregularis]
 gb|PKC70033.1| DEAD-domain-containing protein [Rhizophagus irregularis]
 gb|POG68606.1| P-loop containing nucleoside triphosphate hydrolase protein
            [Rhizophagus irregularis DAOM 181602=DAOM 197198]
          Length = 792

 Score =  101 bits (252), Expect = 6e-22
 Identities = 74/152 (48%), Positives = 79/152 (51%), Gaps = 3/152 (1%)
 Frame = -1

Query: 479  FAGDLVRNLESSGKVVPSSLMDLAMQNAKFRKSRQMIXXXXXXXXXXXXXXXXXXXXXXX 300
            FAGDLVRNLESSG+VVPSSLMDLAMQNA+FRKSRQMI                       
Sbjct: 645  FAGDLVRNLESSGQVVPSSLMDLAMQNARFRKSRQMIRGGRGRSGRSGRGRGRGRGGRGS 704

Query: 299  XXXSNXXXXXXXXXXXXXXXXXIPPPPQLSTSNRSGRS-NMSGF--KFQMKFQKASSAXX 129
               SN                 IPPPPQLS S++S RS NM GF  KFQM FQKASSA  
Sbjct: 705  GSSSN---AIPLGSGRAGGGAQIPPPPQLSASSKSDRSNNMGGFQSKFQMNFQKASSA-E 760

Query: 128  XXXXXXXXXXXXXXXXXXXXSKDPQRKRRWDS 33
                                S+D QRKRRWDS
Sbjct: 761  SELGLLRSSNTGSSSTSKSSSRDQQRKRRWDS 792


>gb|PKY17543.1| DEAD-domain-containing protein [Rhizophagus irregularis]
          Length = 658

 Score = 70.9 bits (172), Expect = 3e-11
 Identities = 35/37 (94%), Positives = 37/37 (100%)
 Frame = -1

Query: 479 FAGDLVRNLESSGKVVPSSLMDLAMQNAKFRKSRQMI 369
           FAGDLVRNLESSG+VVPSSLMDLAMQNA+FRKSRQMI
Sbjct: 489 FAGDLVRNLESSGQVVPSSLMDLAMQNARFRKSRQMI 525


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